RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 BEND7Q8N7W2 519 aaPredicted RBP4.15□□□□□ -1.75
CUL3-203ENST00000409096 FBLIM1Q8WUP2 373 aa4.15□□□□□ -1.75
CUL3-203ENST00000409096 MEGF10Q96KG7 1140 aa4.15□□□□□ -1.75
CUL3-203ENST00000409096 SRPK1Q96SB4 655 aaKnown RBP4.15□□□□□ -1.75
CUL3-203ENST00000409096 NOP53Q9NZM5 478 aaKnown RBP4.15□□□□□ -1.75
CUL3-203ENST00000409096 DAGLAQ9Y4D2 1042 aa4.15□□□□□ -1.75
CUL3-203ENST00000409096 MRPL42Q9Y6G3 142 aaKnown RBP4.15□□□□□ -1.75
CUL3-203ENST00000409096 SPDYE3A6NKU9 549 aa4.15□□□□□ -1.75
CUL3-203ENST00000409096 GJB6O95452 261 aa4.15□□□□□ -1.75
CUL3-203ENST00000409096 MBTPS1Q14703 1052 aa4.15□□□□□ -1.75
CUL3-203ENST00000409096 HP1BP3Q5SSJ5 553 aaPredicted RBP4.15□□□□□ -1.75
CUL3-203ENST00000409096 TDRD10Q5VZ19 366 aaKnown RBP4.15□□□□□ -1.75
CUL3-203ENST00000409096 UNC5AQ6ZN44 842 aa4.15□□□□□ -1.75
CUL3-203ENST00000409096 MCATQ8IVS2 390 aaKnown RBP4.15□□□□□ -1.75
CUL3-203ENST00000409096 LENG1Q96BZ8 264 aaPredicted RBP4.15□□□□□ -1.75
CUL3-203ENST00000409096 SEMA6CQ9H3T2 930 aa4.15□□□□□ -1.75
CUL3-203ENST00000409096 CNNM2Q9H8M5 875 aa4.15□□□□□ -1.75
CUL3-203ENST00000409096 R3HCC1Q9Y3T6 440 aaKnown RBP4.15□□□□□ -1.75
CUL3-203ENST00000409096 SYNGAP1Q96PV0 1343 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 CHRNA4P43681 627 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 NRG1Q02297 640 aaPredicted RBP4.14□□□□□ -1.75
CUL3-203ENST00000409096 SMYD4Q8IYR2 804 aaPredicted RBP4.14□□□□□ -1.75
CUL3-203ENST00000409096 RIN3Q8TB24 985 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 WFDC12Q8WWY7 111 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 DEPDC7Q96QD5 511 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 KIF2CQ99661 725 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 ATXN3LQ9H3M9 355 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 GSX1Q9H4S2 264 aaPredicted RBP4.14□□□□□ -1.75
CUL3-203ENST00000409096 PIDD1Q9HB75 910 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 DDAH1O94760 285 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 UBOX5O94941 541 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 NFICP08651 508 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 RAG1P15918 1043 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 CASP7P55210 303 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 TNNI3KQ59H18 835 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 CDCP2Q5VXM1 449 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 DIEXFQ68CQ4 756 aaKnown RBP4.14□□□□□ -1.75
CUL3-203ENST00000409096 HID1Q8IV36 788 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 TMEM192Q8IY95 271 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 SLFN12Q8IYM2 578 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 PHACTR4Q8IZ21 702 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 BAHD1Q8TBE0 780 aaPredicted RBP4.14□□□□□ -1.75
CUL3-203ENST00000409096 ZNF512BQ96KM6 892 aaPredicted RBP4.14□□□□□ -1.75
CUL3-203ENST00000409096 TM9SF2Q99805 663 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 MSRB2Q9Y3D2 182 aa4.14□□□□□ -1.75
CUL3-203ENST00000409096 NBPF6Q5VWK0 638 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 ANKRD34AQ69YU3 496 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 Q6ZS46 218 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 ARMCX6Q7L4S7 300 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 PPFIBP1Q86W92 1011 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 MRPL41Q8IXM3 137 aaKnown RBP4.13□□□□□ -1.75
CUL3-203ENST00000409096 ARMC10Q8N2F6 343 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 NBPF4Q96M43 638 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 ACSS3Q9H6R3 686 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 ADAM30Q9UKF2 790 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 TBX22Q9Y458 520 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 C9IYK1 514 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 TNFRSF10CO14798 259 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 U2SURPO15042 1029 aaKnown RBP4.13□□□□□ -1.75
CUL3-203ENST00000409096 CDK5R2Q13319 367 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 ZNF746Q6NUN9 644 aaPredicted RBP4.13□□□□□ -1.75
CUL3-203ENST00000409096 SPATC1Q76KD6 591 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.13□□□□□ -1.75
CUL3-203ENST00000409096 DCAF11Q8TEB1 546 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 KLHL6Q8WZ60 621 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 SLC6A18Q96N87 628 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 LGR4Q9BXB1 951 aa4.13□□□□□ -1.75
CUL3-203ENST00000409096 SSU72Q9NP77 194 aaKnown RBP4.13□□□□□ -1.75
CUL3-203ENST00000409096 KRBA1A5PL33 1030 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 LRRFIP1Q32MZ4 808 aaKnown RBP4.12□□□□□ -1.75
CUL3-203ENST00000409096 ZNF662Q6ZS27 426 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 OR6P1Q8NGX9 317 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 FAM46AQ96IP4 442 aaKnown RBP4.12□□□□□ -1.75
CUL3-203ENST00000409096 SIRPGQ9P1W8 387 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 TACC3Q9Y6A5 838 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 SART1O43290 800 aaKnown RBP4.12□□□□□ -1.75
CUL3-203ENST00000409096 GAS2O43903 313 aaKnown RBP4.12□□□□□ -1.75
CUL3-203ENST00000409096 TP53P04637 393 aaPredicted RBP4.12□□□□□ -1.75
CUL3-203ENST00000409096 BMP3P12645 472 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 HNRNPUQ00839 825 aaKnown RBP eCLIP4.12□□□□□ -1.75
CUL3-203ENST00000409096 ADGRE1Q14246 886 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 SOGA3Q5TF21 947 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 VHLLQ6RSH7 139 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 CDC37L1Q7L3B6 337 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 FAM178BQ8IXR5 827 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 C19orf47Q8N9M1 422 aaKnown RBP4.12□□□□□ -1.75
CUL3-203ENST00000409096 ZNF507Q8TCN5 953 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 DNAJC7Q99615 494 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 PFDN2Q9UHV9 154 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 CNTNAP4Q9C0A0 1308 aa4.12□□□□□ -1.75
CUL3-203ENST00000409096 PIK3R2O00459 728 aa4.11□□□□□ -1.75
CUL3-203ENST00000409096 USP11P51784 963 aa4.11□□□□□ -1.75
CUL3-203ENST00000409096 MLECQ14165 292 aa4.11□□□□□ -1.75
CUL3-203ENST00000409096 FXNQ16595 210 aa4.11□□□□□ -1.75
CUL3-203ENST00000409096 SLC6A19Q695T7 634 aa4.11□□□□□ -1.75
CUL3-203ENST00000409096 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.11□□□□□ -1.75
CUL3-203ENST00000409096 SHISA5Q8N114 240 aa4.11□□□□□ -1.75
CUL3-203ENST00000409096 LILRB2Q8N423 598 aa4.11□□□□□ -1.75
CUL3-203ENST00000409096 PPP1R13LQ8WUF5 828 aa4.11□□□□□ -1.75
CUL3-203ENST00000409096 UTP4Q969X6 686 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms