RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ECHDC1Q9NTX5 307 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 NDUFB9Q9Y6M9 179 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 MYPNQ86TC9 1320 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 ZNF532Q9HCE3 1301 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 SIPA1L1O43166 1804 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 NAV1Q8NEY1 1877 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 PDE4DIPQ5VU43 2346 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 USP17L10C9JJH3 530 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 TNPO2O14787 897 aaKnown RBP10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 CAPN2P17655 700 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 RRP1P56182 461 aaKnown RBP10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 BACE1P56817 501 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 UBXN2AP68543 259 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 MTMR2Q13614 643 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 AAMPQ13685 434 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 UBE3CQ15386 1083 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 SLC4A8Q2Y0W8 1093 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 TATDN1Q6P1N9 297 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 SLAIN1Q8ND83 568 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 NKX2-3Q8TAU0 364 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 COA7Q96BR5 231 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 FEZ1Q99689 392 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 BOLA2Q9H3K6 86 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 DCTPP1Q9H773 170 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 DNAJC18Q9H819 358 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 SWAP70Q9UH65 585 aa10.96□□□□□ -0.65
SNORD88A-201ENST00000408314 ERC2O15083 957 aa10.95□□□□□ -0.66
SNORD88A-201ENST00000408314 GDF11O95390 407 aa10.95□□□□□ -0.66
SNORD88A-201ENST00000408314 ZFYP08048 801 aaPredicted RBP10.95□□□□□ -0.66
SNORD88A-201ENST00000408314 GRK4P32298 578 aa10.95□□□□□ -0.66
SNORD88A-201ENST00000408314 ADD2P35612 726 aa10.95□□□□□ -0.66
SNORD88A-201ENST00000408314 ABCB5Q2M3G0 1257 aa10.95□□□□□ -0.66
SNORD88A-201ENST00000408314 CERKLQ49MI3 558 aaPredicted RBP10.95□□□□□ -0.66
SNORD88A-201ENST00000408314 USP17L2Q6R6M4 530 aa10.95□□□□□ -0.66
SNORD88A-201ENST00000408314 ARHGAP39Q9C0H5 1083 aa10.95□□□□□ -0.66
SNORD88A-201ENST00000408314 MCM9Q9NXL9 1143 aa10.95□□□□□ -0.66
SNORD88A-201ENST00000408314 DDX60LQ5H9U9 1706 aaKnown RBP10.95□□□□□ -0.66
SNORD88A-201ENST00000408314 TCRBV5S4A2TA0A5A2 114 aa10.94□□□□□ -0.66
SNORD88A-201ENST00000408314 GH2P01242 217 aa10.94□□□□□ -0.66
SNORD88A-201ENST00000408314 SLURP2P0DP57 97 aa10.94□□□□□ -0.66
SNORD88A-201ENST00000408314 HOXA7P31268 230 aaPredicted RBP10.94□□□□□ -0.66
SNORD88A-201ENST00000408314 TREML2Q5T2D2 321 aa10.94□□□□□ -0.66
SNORD88A-201ENST00000408314 CCDC84Q86UT8 332 aaPredicted RBP10.94□□□□□ -0.66
SNORD88A-201ENST00000408314 ANKRD13CQ8N6S4 541 aa10.94□□□□□ -0.66
SNORD88A-201ENST00000408314 ASCC2Q9H1I8 757 aaPredicted RBP10.94□□□□□ -0.66
SNORD88A-201ENST00000408314 SH2D4AQ9H788 454 aa10.94□□□□□ -0.66
SNORD88A-201ENST00000408314 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.94□□□□□ -0.66
SNORD88A-201ENST00000408314 BIN2Q9UBW5 565 aaPredicted RBP10.94□□□□□ -0.66
SNORD88A-201ENST00000408314 MYH7P12883 1935 aa10.94□□□□□ -0.66
SNORD88A-201ENST00000408314 TTC41PQ6P2S7 1318 aa10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 HTTP42858 3142 aa10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 MBD4O95243 580 aa10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 IRF5Q13568 498 aa10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 RRP1BQ14684 758 aaKnown RBP10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 RAB3GAP1Q15042 981 aa10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 PRPF38BQ5VTL8 546 aaKnown RBP10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 CCAR1Q8IX12 1150 aaKnown RBP10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 LCORLQ8N3X6 602 aa10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 PXYLP1Q8TE99 480 aa10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 C12orf42Q96LP6 360 aa10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 DCP1AQ9NPI6 582 aaPredicted RBP10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 MORF4L1Q9UBU8 362 aa10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 KIAA0100Q14667 2235 aaKnown RBP10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 MGAMO43451 1857 aa10.93□□□□□ -0.66
SNORD88A-201ENST00000408314 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 SMARCA5O60264 1052 aaPredicted RBP10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 CCNA1P78396 465 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 CAP1Q01518 475 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 PRKCZQ05513 592 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 TMEM179Q6ZVK1 233 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 KBTBD3Q8NAB2 608 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 SH3TC2Q8TF17 1288 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 SOCS4Q8WXH5 440 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 CCDC17Q96LX7 622 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 KIAA1683Q9H0B3 1180 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 ARMT1Q9H993 441 aa10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 CWC22Q9HCG8 908 aaKnown RBP10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 ARPP21Q9UBL0 812 aaPredicted RBP10.92□□□□□ -0.66
SNORD88A-201ENST00000408314 ZSWIM8A7E2V4 1837 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 POTEFA5A3E0 1075 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 MPHOSPH10O00566 681 aaKnown RBP10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 ADCY3O60266 1144 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 GLRX3O76003 335 aaKnown RBP10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 GNAT2P19087 354 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 MAPK4P31152 587 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 SHMT1P34896 483 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 FLT3LGP49771 235 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 HERVK_113P62684 666 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 GABPAQ06546 454 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 GIMAP6Q6P9H5 292 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 GPRC5AQ8NFJ5 357 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 SDR42E1Q8WUS8 393 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms