RNA–Protein interactions for RNA: ENST00000407089.2

SPTLC1P2-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 2, humanhuman

BASIC

Gene SPTLC1P2, Length 121 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P2-201ENST00000407089 IFT57Q9NWB7 429 aa6.75□□□□□ -1.33
SPTLC1P2-201ENST00000407089 MROH5Q6ZUA9 1318 aa6.75□□□□□ -1.33
SPTLC1P2-201ENST00000407089 MYBBP1AQ9BQG0 1328 aaKnown RBP6.75□□□□□ -1.33
SPTLC1P2-201ENST00000407089 FRMPD3Q5JV73 1810 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 MYO9BQ13459 2157 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 CHD9Q3L8U1 2897 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 USP17L5A8MUK1 530 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 TBC1D12O60347 775 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 MYCNP04198 464 aaPredicted RBP6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 SLC4A2P04920 1241 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 GNAI1P63096 354 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 TMEM240Q5SV17 173 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 ANO1Q5XXA6 986 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 MICALL1Q8N3F8 863 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 WDR66Q8TBY9 1149 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 DNAAF4Q8WXU2 420 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 HERVK_113Q902F9 699 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 RUNDC1Q96C34 613 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 FBXL18Q96ME1 805 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 TBC1D2Q9BYX2 928 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 CD320Q9NPF0 282 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 TMEM39AQ9NV64 488 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 MSRAQ9UJ68 235 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 NDUFB9Q9Y6M9 179 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 XIRP2A4UGR9 3374 aa6.74□□□□□ -1.33
SPTLC1P2-201ENST00000407089 PLXNA1Q9UIW2 1896 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 SLC15A5A6NIM6 579 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 GLRX3O76003 335 aaKnown RBP6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 HOXC6P09630 235 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 CYBAP13498 195 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 PTPREP23469 700 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 PRDX5P30044 214 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 CAP2P40123 477 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 BACE1P56817 501 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 FAAP100Q0VG06 881 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 RRP1BQ14684 758 aaKnown RBP6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 LRRC41Q15345 812 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 SKIV2LQ15477 1246 aaKnown RBP6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 RAB30Q15771 203 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 NPLOC4Q8TAT6 608 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 PAGR1Q9BTK6 254 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 STK31Q9BXU1 1019 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 PCGF6Q9BYE7 350 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 OSBPL5Q9H0X9 879 aaPredicted RBP6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 NKX2-4Q9H2Z4 354 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 SLC28A3Q9HAS3 691 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 DDX4Q9NQI0 724 aaKnown RBP6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 PHF24Q9UPV7 400 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 DOCK1Q14185 1865 aa6.73□□□□□ -1.33
SPTLC1P2-201ENST00000407089 LOC285556D6RIA3 1793 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 FAM196BA6NMK8 535 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 SEPT4O43236 478 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 PQBP1O60828 265 aaKnown RBP6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 PDE8BO95263 885 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 TIMP1P01033 207 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 LDHBP07195 334 aaKnown RBP6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 POU3F3P20264 500 aaPredicted RBP6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 FOXK2Q01167 660 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 LRRC24Q50LG9 513 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 ZNF365Q70YC5 407 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 VGLL2Q8N8G2 317 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 SLC44A5Q8NCS7 719 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 UIMC1Q96RL1 719 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 WDR18Q9BV38 432 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 KCNH6Q9H252 994 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 AS3MTQ9HBK9 375 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 CWC22Q9HCG8 908 aaKnown RBP6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 TMOD4Q9NZQ9 345 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 COG5Q9UP83 839 aa6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 YBX2Q9Y2T7 364 aaKnown RBP6.72□□□□□ -1.33
SPTLC1P2-201ENST00000407089 REV3LO60673 3130 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 C19orf81C9J6K1 198 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 CNMDO75829 334 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 FGFR2P21802 821 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 ZEB1P37275 1124 aaPredicted RBP6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 FLIIQ13045 1269 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 PPIGQ13427 754 aaKnown RBP eCLIP6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 FKBP5Q13451 457 aaPredicted RBP6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 PICALMQ13492 652 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 MTMR2Q13614 643 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 GRB14Q14449 540 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 METTL24Q5JXM2 366 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 PRAMEF19Q5SWL8 479 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 BEND3Q5T5X7 828 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 MFSD5Q6N075 450 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 CCDC174Q6PII3 467 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 ANKRD33Q7Z3H0 272 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 GTF3C2Q8WUA4 911 aaPredicted RBP6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 TOX2Q96NM4 488 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 RABGAP1Q9Y3P9 1069 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 MTCH2Q9Y6C9 303 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 KIF16BQ96L93 1317 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 DOCK2Q92608 1830 aa6.71□□□□□ -1.34
SPTLC1P2-201ENST00000407089 RFX7Q2KHR2 1363 aa6.7□□□□□ -1.34
SPTLC1P2-201ENST00000407089 DCDC2CA8MYV0 355 aa6.7□□□□□ -1.34
SPTLC1P2-201ENST00000407089 GRM8O00222 908 aa6.7□□□□□ -1.34
SPTLC1P2-201ENST00000407089 RFXAPO00287 272 aa6.7□□□□□ -1.34
SPTLC1P2-201ENST00000407089 ST18O60284 1047 aa6.7□□□□□ -1.34
SPTLC1P2-201ENST00000407089 IFIT1P09914 478 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms