RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 MASTLQ96GX5 879 aa28.57■■■□□ 2.16
DNMT3A-206ENST00000406659 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.57■■■□□ 2.16
DNMT3A-206ENST00000406659 GOLPH3LQ9H4A5 285 aa28.57■■■□□ 2.16
DNMT3A-206ENST00000406659 DLEC1Q9Y238 1755 aa28.56■■■□□ 2.16
DNMT3A-206ENST00000406659 LTBP1Q14766 1721 aa28.56■■■□□ 2.16
DNMT3A-206ENST00000406659 GPR75-ASB3A0A0A6YYF3 556 aa28.56■■■□□ 2.16
DNMT3A-206ENST00000406659 ZC3H12CQ9C0D7 883 aaKnown RBP28.56■■■□□ 2.16
DNMT3A-206ENST00000406659 A0A1W2PQ27 194 aa28.55■■■□□ 2.16
DNMT3A-206ENST00000406659 A0A1W2PQ64 194 aa28.55■■■□□ 2.16
DNMT3A-206ENST00000406659 A0A1W2PQD8 194 aa28.55■■■□□ 2.16
DNMT3A-206ENST00000406659 FAM160A1Q05DH4 1040 aa28.55■■■□□ 2.16
DNMT3A-206ENST00000406659 MRPS27Q92552 414 aaKnown RBP28.55■■■□□ 2.16
DNMT3A-206ENST00000406659 RNF26Q9BY78 433 aaPredicted RBP28.55■■■□□ 2.16
DNMT3A-206ENST00000406659 MMP1P03956 469 aa28.55■■■□□ 2.16
DNMT3A-206ENST00000406659 GTF2IP78347 998 aa28.55■■■□□ 2.16
DNMT3A-206ENST00000406659 TYRO3Q06418 890 aa28.55■■■□□ 2.16
DNMT3A-206ENST00000406659 FAM163AQ96GL9 167 aaPredicted RBP28.55■■■□□ 2.16
DNMT3A-206ENST00000406659 CTAGE5O15320 804 aa28.54■■■□□ 2.16
DNMT3A-206ENST00000406659 NMT2O60551 498 aa28.54■■■□□ 2.16
DNMT3A-206ENST00000406659 TROAPQ12815 778 aa28.54■■■□□ 2.16
DNMT3A-206ENST00000406659 DPP8Q6V1X1 898 aaPredicted RBP28.54■■■□□ 2.16
DNMT3A-206ENST00000406659 MAPKAPK5Q8IW41 473 aa28.54■■■□□ 2.16
DNMT3A-206ENST00000406659 TEX11Q8IYF3 940 aa28.54■■■□□ 2.16
DNMT3A-206ENST00000406659 MKNK2Q9HBH9 465 aa28.54■■■□□ 2.16
DNMT3A-206ENST00000406659 KINO60870 393 aaKnown RBP28.53■■■□□ 2.16
DNMT3A-206ENST00000406659 SASS6Q6UVJ0 657 aa28.53■■■□□ 2.16
DNMT3A-206ENST00000406659 DYNLL2Q96FJ2 89 aa28.53■■■□□ 2.16
DNMT3A-206ENST00000406659 TFAP4Q01664 338 aa28.52■■■□□ 2.16
DNMT3A-206ENST00000406659 SLC39A14Q15043 492 aa28.52■■■□□ 2.16
DNMT3A-206ENST00000406659 ENGASEQ8NFI3 743 aa28.52■■■□□ 2.16
DNMT3A-206ENST00000406659 SAP30BPQ9UHR5 308 aaKnown RBP28.52■■■□□ 2.16
DNMT3A-206ENST00000406659 KCNJ14Q9UNX9 436 aa28.52■■■□□ 2.16
DNMT3A-206ENST00000406659 TNS1Q9HBL0 1735 aaKnown RBP28.52■■■□□ 2.16
DNMT3A-206ENST00000406659 ROBO3Q96MS0 1386 aa28.52■■■□□ 2.16
DNMT3A-206ENST00000406659 SNW1Q13573 536 aaKnown RBP28.52■■■□□ 2.16
DNMT3A-206ENST00000406659 CTCFLQ8NI51 663 aaPredicted RBP28.52■■■□□ 2.16
DNMT3A-206ENST00000406659 FBXW7Q969H0 707 aa28.52■■■□□ 2.16
DNMT3A-206ENST00000406659 ZNF622Q969S3 477 aaKnown RBP eCLIP28.52■■■□□ 2.16
DNMT3A-206ENST00000406659 NAV1Q8NEY1 1877 aa28.52■■■□□ 2.16
DNMT3A-206ENST00000406659 PRPF3O43395 683 aaKnown RBP28.51■■■□□ 2.15
DNMT3A-206ENST00000406659 XBP1P17861 261 aa28.51■■■□□ 2.15
DNMT3A-206ENST00000406659 CCDC178Q5BJE1 867 aa28.51■■■□□ 2.15
DNMT3A-206ENST00000406659 OLFM4Q6UX06 510 aa28.51■■■□□ 2.15
DNMT3A-206ENST00000406659 NOSTRINQ8IVI9 506 aa28.51■■■□□ 2.15
DNMT3A-206ENST00000406659 DIS3L2Q8IYB7 885 aaKnown RBP28.51■■■□□ 2.15
DNMT3A-206ENST00000406659 MRVI1Q9Y6F6 885 aa28.51■■■□□ 2.15
DNMT3A-206ENST00000406659 PLEKHA8P1O95397 391 aa28.5■■■□□ 2.15
DNMT3A-206ENST00000406659 FOXP1Q9H334 677 aaPredicted RBP28.5■■■□□ 2.15
DNMT3A-206ENST00000406659 GAKO14976 1311 aa28.5■■■□□ 2.15
DNMT3A-206ENST00000406659 BTBD18B2RXH4 712 aa28.5■■■□□ 2.15
DNMT3A-206ENST00000406659 G3V3G9 751 aa28.5■■■□□ 2.15
DNMT3A-206ENST00000406659 FUT2Q10981 343 aa28.5■■■□□ 2.15
DNMT3A-206ENST00000406659 DCAF8Q5TAQ9 597 aa28.5■■■□□ 2.15
DNMT3A-206ENST00000406659 TMTC3Q6ZXV5 915 aa28.5■■■□□ 2.15
DNMT3A-206ENST00000406659 ZNF444Q8N0Y2 327 aaPredicted RBP28.5■■■□□ 2.15
DNMT3A-206ENST00000406659 JMYQ8N9B5 988 aa28.5■■■□□ 2.15
DNMT3A-206ENST00000406659 ZNF287Q9HBT7 754 aa28.5■■■□□ 2.15
DNMT3A-206ENST00000406659 SUGT1Q9Y2Z0 365 aa28.5■■■□□ 2.15
DNMT3A-206ENST00000406659 C2CD5Q86YS7 1000 aa28.49■■■□□ 2.15
DNMT3A-206ENST00000406659 KAT14Q9H8E8 782 aa28.49■■■□□ 2.15
DNMT3A-206ENST00000406659 V9GY48 417 aaPredicted RBP28.49■■■□□ 2.15
DNMT3A-206ENST00000406659 MYH6P13533 1939 aa28.48■■■□□ 2.15
DNMT3A-206ENST00000406659 RGPD3A6NKT7 1758 aaPredicted RBP28.48■■■□□ 2.15
DNMT3A-206ENST00000406659 RGPD4Q7Z3J3 1758 aa28.48■■■□□ 2.15
DNMT3A-206ENST00000406659 PLCD1P51178 756 aa28.48■■■□□ 2.15
DNMT3A-206ENST00000406659 DGKHQ86XP1 1220 aa28.48■■■□□ 2.15
DNMT3A-206ENST00000406659 FMR1NBQ8N0W7 255 aaPredicted RBP28.48■■■□□ 2.15
DNMT3A-206ENST00000406659 EYA3Q99504 573 aa28.48■■■□□ 2.15
DNMT3A-206ENST00000406659 A0A1B0GVL5 298 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 PPP6R2O75170 966 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 RHBDL3P58872 404 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 RCSD1Q6JBY9 416 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 FAM200AQ8TCP9 573 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 MAP3K14Q99558 947 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 COL11A2P13942 1736 aaPredicted RBP28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 ESPNB1AK53 854 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 H0YIN7 160 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 TSPY3P0CV98 308 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 TSPY8P0CW00 308 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 MARCKSP29966 332 aaPredicted RBP28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 PKN1Q16512 942 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 DOK7Q18PE1 504 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 HS1BP3Q53T59 392 aa28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 RRAGDQ9NQL2 400 aaPredicted RBP28.47■■■□□ 2.15
DNMT3A-206ENST00000406659 CMA1P23946 247 aa28.46■■■□□ 2.15
DNMT3A-206ENST00000406659 KIF5BP33176 963 aa28.46■■■□□ 2.15
DNMT3A-206ENST00000406659 NDUFA8P51970 172 aa28.46■■■□□ 2.15
DNMT3A-206ENST00000406659 PTPAQ15257 358 aa28.46■■■□□ 2.15
DNMT3A-206ENST00000406659 ANO6Q4KMQ2 910 aa28.46■■■□□ 2.15
DNMT3A-206ENST00000406659 AXDND1Q5T1B0 1012 aaPredicted RBP28.46■■■□□ 2.15
DNMT3A-206ENST00000406659 ANKS1AQ92625 1134 aa28.46■■■□□ 2.15
DNMT3A-206ENST00000406659 USP25Q9UHP3 1055 aa28.46■■■□□ 2.15
DNMT3A-206ENST00000406659 DAGLAQ9Y4D2 1042 aa28.46■■■□□ 2.15
DNMT3A-206ENST00000406659 IL17RBQ9NRM6 502 aa28.45■■■□□ 2.15
DNMT3A-206ENST00000406659 TCP11L1Q9NUJ3 509 aa28.45■■■□□ 2.15
DNMT3A-206ENST00000406659 FLT1P17948 1338 aa28.45■■■□□ 2.14
DNMT3A-206ENST00000406659 CDK5RAP2Q96SN8 1893 aa28.45■■■□□ 2.14
DNMT3A-206ENST00000406659 SLC15A2Q16348 729 aa28.45■■■□□ 2.14
DNMT3A-206ENST00000406659 STYK1Q6J9G0 422 aa28.45■■■□□ 2.14
DNMT3A-206ENST00000406659 SRBD1Q8N5C6 995 aaKnown RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms