RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 ARID4AP29374 1257 aaPredicted RBP25.82■■□□□ 1.72
RHBDD3-202ENST00000406335 ITPRIPQ8IWB1 547 aa25.82■■□□□ 1.72
RHBDD3-202ENST00000406335 DEFB123Q8N688 67 aa25.82■■□□□ 1.72
RHBDD3-202ENST00000406335 SOCS4Q8WXH5 440 aa25.82■■□□□ 1.72
RHBDD3-202ENST00000406335 WDR18Q9BV38 432 aa25.82■■□□□ 1.72
RHBDD3-202ENST00000406335 SNRKQ9NRH2 765 aa25.82■■□□□ 1.72
RHBDD3-202ENST00000406335 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.82■■□□□ 1.72
RHBDD3-202ENST00000406335 USP17L10C9JJH3 530 aa25.81■■□□□ 1.72
RHBDD3-202ENST00000406335 ZKSCAN1P17029 563 aaPredicted RBP25.81■■□□□ 1.72
RHBDD3-202ENST00000406335 MCAMP43121 646 aa25.81■■□□□ 1.72
RHBDD3-202ENST00000406335 HERVK_113P62684 666 aa25.81■■□□□ 1.72
RHBDD3-202ENST00000406335 CCDC158Q5M9N0 1113 aa25.81■■□□□ 1.72
RHBDD3-202ENST00000406335 FOXP4Q8IVH2 680 aaPredicted RBP25.81■■□□□ 1.72
RHBDD3-202ENST00000406335 TRMT44Q8IYL2 757 aaKnown RBP25.81■■□□□ 1.72
RHBDD3-202ENST00000406335 PAGR1Q9BTK6 254 aa25.81■■□□□ 1.72
RHBDD3-202ENST00000406335 UBE2OQ9C0C9 1292 aaKnown RBP25.81■■□□□ 1.72
RHBDD3-202ENST00000406335 C1orf115Q9H7X2 142 aa25.81■■□□□ 1.72
RHBDD3-202ENST00000406335 MAPK4P31152 587 aa25.8■■□□□ 1.72
RHBDD3-202ENST00000406335 HOXA7P31268 230 aaPredicted RBP25.8■■□□□ 1.72
RHBDD3-202ENST00000406335 OS9Q13438 667 aaPredicted RBP25.8■■□□□ 1.72
RHBDD3-202ENST00000406335 OGDHLQ9ULD0 1010 aa25.8■■□□□ 1.72
RHBDD3-202ENST00000406335 PEX10O60683 326 aa25.79■■□□□ 1.72
RHBDD3-202ENST00000406335 GDF11O95390 407 aa25.79■■□□□ 1.72
RHBDD3-202ENST00000406335 HLA-DOAP06340 250 aa25.79■■□□□ 1.72
RHBDD3-202ENST00000406335 MAGEA10P43363 369 aaPredicted RBP25.79■■□□□ 1.72
RHBDD3-202ENST00000406335 PANK1Q8TE04 598 aa25.79■■□□□ 1.72
RHBDD3-202ENST00000406335 COL2A1P02458 1487 aaPredicted RBP25.79■■□□□ 1.72
RHBDD3-202ENST00000406335 TDHQ8IZJ6 230 aa25.78■■□□□ 1.72
RHBDD3-202ENST00000406335 TXNRD2Q9NNW7 524 aa25.78■■□□□ 1.72
RHBDD3-202ENST00000406335 SAP30BPQ9UHR5 308 aaKnown RBP25.78■■□□□ 1.72
RHBDD3-202ENST00000406335 PALD1Q9ULE6 856 aa25.78■■□□□ 1.72
RHBDD3-202ENST00000406335 XRCC5P13010 732 aaKnown RBP25.77■■□□□ 1.72
RHBDD3-202ENST00000406335 RGS2P41220 211 aa25.77■■□□□ 1.72
RHBDD3-202ENST00000406335 CACNB2Q08289 660 aaPredicted RBP25.76■■□□□ 1.71
RHBDD3-202ENST00000406335 WDR78Q5VTH9 848 aa25.76■■□□□ 1.71
RHBDD3-202ENST00000406335 GPR153Q6NV75 609 aa25.76■■□□□ 1.71
RHBDD3-202ENST00000406335 PLEKHH3Q7Z736 793 aa25.76■■□□□ 1.71
RHBDD3-202ENST00000406335 GTF3C2Q8WUA4 911 aaPredicted RBP25.76■■□□□ 1.71
RHBDD3-202ENST00000406335 RBPJLQ9UBG7 517 aa25.76■■□□□ 1.71
RHBDD3-202ENST00000406335 FLT1P17948 1338 aa25.75■■□□□ 1.71
RHBDD3-202ENST00000406335 MNX1P50219 401 aaPredicted RBP25.75■■□□□ 1.71
RHBDD3-202ENST00000406335 ERVK-9P63128 1117 aa25.75■■□□□ 1.71
RHBDD3-202ENST00000406335 ERVK-24P63145 666 aa25.75■■□□□ 1.71
RHBDD3-202ENST00000406335 Q3C1V9 767 aa25.75■■□□□ 1.71
RHBDD3-202ENST00000406335 USP17L2Q6R6M4 530 aa25.75■■□□□ 1.71
RHBDD3-202ENST00000406335 Q7L0L9 218 aa25.75■■□□□ 1.71
RHBDD3-202ENST00000406335 GPR142Q7Z601 462 aa25.75■■□□□ 1.71
RHBDD3-202ENST00000406335 GINM1Q9NU53 330 aa25.75■■□□□ 1.71
RHBDD3-202ENST00000406335 RANBP2P49792 3224 aaKnown RBP25.75■■□□□ 1.71
RHBDD3-202ENST00000406335 MYO5AQ9Y4I1 1855 aaKnown RBP25.74■■□□□ 1.71
RHBDD3-202ENST00000406335 PPP4CP60510 307 aa25.74■■□□□ 1.71
RHBDD3-202ENST00000406335 JAG1P78504 1218 aa25.74■■□□□ 1.71
RHBDD3-202ENST00000406335 ATP8B2P98198 1209 aa25.74■■□□□ 1.71
RHBDD3-202ENST00000406335 POLA2Q14181 598 aa25.74■■□□□ 1.71
RHBDD3-202ENST00000406335 LRIT3Q3SXY7 679 aa25.74■■□□□ 1.71
RHBDD3-202ENST00000406335 MAP3K21Q5TCX8 1036 aa25.74■■□□□ 1.71
RHBDD3-202ENST00000406335 FEZ1Q99689 392 aa25.74■■□□□ 1.71
RHBDD3-202ENST00000406335 ZBTB21Q9ULJ3 1066 aa25.74■■□□□ 1.71
RHBDD3-202ENST00000406335 PHIPQ8WWQ0 1821 aa25.74■■□□□ 1.71
RHBDD3-202ENST00000406335 GLRX3O76003 335 aaKnown RBP25.73■■□□□ 1.71
RHBDD3-202ENST00000406335 CCND3P30281 292 aaPredicted RBP25.73■■□□□ 1.71
RHBDD3-202ENST00000406335 ZYXQ15942 572 aaKnown RBP25.73■■□□□ 1.71
RHBDD3-202ENST00000406335 PORCNQ9H237 461 aa25.73■■□□□ 1.71
RHBDD3-202ENST00000406335 USP5P45974 858 aa25.72■■□□□ 1.71
RHBDD3-202ENST00000406335 CCNA1P78396 465 aa25.72■■□□□ 1.71
RHBDD3-202ENST00000406335 CCL14Q16627 93 aa25.72■■□□□ 1.71
RHBDD3-202ENST00000406335 SHROOM1Q2M3G4 852 aaPredicted RBP25.72■■□□□ 1.71
RHBDD3-202ENST00000406335 TNNI3KQ59H18 835 aa25.72■■□□□ 1.71
RHBDD3-202ENST00000406335 SSH3Q8TE77 659 aa25.72■■□□□ 1.71
RHBDD3-202ENST00000406335 DBNDD2Q9BQY9 259 aa25.72■■□□□ 1.71
RHBDD3-202ENST00000406335 RCAN3Q9UKA8 241 aa25.72■■□□□ 1.71
RHBDD3-202ENST00000406335 FPGT-TNNI3KV9GXZ4 949 aa25.72■■□□□ 1.71
RHBDD3-202ENST00000406335 PTPRFP10586 1907 aa25.71■■□□□ 1.71
RHBDD3-202ENST00000406335 PFASO15067 1338 aa25.71■■□□□ 1.71
RHBDD3-202ENST00000406335 MDM2Q00987 491 aaPredicted RBP25.71■■□□□ 1.71
RHBDD3-202ENST00000406335 EDC3Q96F86 508 aaKnown RBP25.71■■□□□ 1.71
RHBDD3-202ENST00000406335 APBA2Q99767 749 aa25.71■■□□□ 1.71
RHBDD3-202ENST00000406335 DNAJC18Q9H819 358 aa25.71■■□□□ 1.71
RHBDD3-202ENST00000406335 EMILIN3Q9NT22 766 aa25.71■■□□□ 1.71
RHBDD3-202ENST00000406335 NDUFB9Q9Y6M9 179 aa25.71■■□□□ 1.71
RHBDD3-202ENST00000406335 GH2P01242 217 aa25.7■■□□□ 1.7
RHBDD3-202ENST00000406335 CYP2E1P05181 493 aaPredicted RBP25.7■■□□□ 1.7
RHBDD3-202ENST00000406335 CYP7A1P22680 504 aa25.7■■□□□ 1.7
RHBDD3-202ENST00000406335 CNGA1P29973 690 aa25.7■■□□□ 1.7
RHBDD3-202ENST00000406335 DYNLL1P63167 89 aaKnown RBP25.7■■□□□ 1.7
RHBDD3-202ENST00000406335 MFSD14CQ5VZR4 134 aa25.7■■□□□ 1.7
RHBDD3-202ENST00000406335 ADGRA1Q86SQ6 560 aa25.7■■□□□ 1.7
RHBDD3-202ENST00000406335 USP17L15C9J2P7 530 aa25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 USP17L13C9JLJ4 530 aa25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 USP17L11C9JVI0 530 aa25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 USP17L18D6R9N7 530 aa25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 USP17L22D6RA61 530 aa25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 USP17L17D6RBQ6 530 aa25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 USP17L19D6RCP7 530 aa25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 USP17L20D6RJB6 530 aa25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 SURF6O75683 361 aaKnown RBP25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 ZAP70P43403 619 aa25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 USP17L24Q0WX57 530 aa25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 RAB3GAP1Q15042 981 aa25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 MORN1Q5T089 497 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms