RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 WDR18Q9BV38 432 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 ATXN3LQ9H3M9 355 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 FANCLQ9NW38 375 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 TMEM260Q9NX78 707 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 KLHL3Q9UH77 587 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 CORINQ9Y5Q5 1042 aa6.79□□□□□ -1.32
HMGB3P18-201ENST00000406327 IQCA1LA6NCM1 817 aa6.78□□□□□ -1.32
HMGB3P18-201ENST00000406327 NID1P14543 1247 aa6.78□□□□□ -1.32
HMGB3P18-201ENST00000406327 GRK4P32298 578 aa6.78□□□□□ -1.32
HMGB3P18-201ENST00000406327 CDK8P49336 464 aa6.78□□□□□ -1.32
HMGB3P18-201ENST00000406327 SSRP1Q08945 709 aaKnown RBP6.78□□□□□ -1.32
HMGB3P18-201ENST00000406327 PTPROQ16827 1216 aa6.78□□□□□ -1.32
HMGB3P18-201ENST00000406327 ZC3H12BQ5HYM0 836 aaKnown RBP6.78□□□□□ -1.32
HMGB3P18-201ENST00000406327 DMRTC2Q8IXT2 367 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P18-201ENST00000406327 ZNF507Q8TCN5 953 aa6.78□□□□□ -1.32
HMGB3P18-201ENST00000406327 ANTXR1Q9H6X2 564 aa6.78□□□□□ -1.32
HMGB3P18-201ENST00000406327 hCG_2014768A0A024R1R8 64 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 AGRPO00253 132 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 DUOXA2Q1HG44 320 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 LONRF2Q1L5Z9 754 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 TRAPPC3LQ5T215 181 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 UNC5AQ6ZN44 842 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 C8orf86Q6ZUL3 223 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 C16orf86Q6ZW13 317 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 CDC37L1Q7L3B6 337 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 C12orf40Q86WS4 652 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 HID1Q8IV36 788 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 SLFN12Q8IYM2 578 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 LRRC47Q8N1G4 583 aaKnown RBP6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 LILRB2Q8N423 598 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 GALNT11Q8NCW6 608 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 FAM13CQ8NE31 585 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 FEZ1Q99689 392 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 RUSC1Q9BVN2 902 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 SPC25Q9HBM1 224 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 CYP4F12Q9HCS2 524 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 HIF3AQ9Y2N7 669 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 PCDHGC5Q9Y5F6 944 aa6.77□□□□□ -1.33
HMGB3P18-201ENST00000406327 KDM2BQ8NHM5 1336 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 DNAJC6O75061 913 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 CTSBP07858 339 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 COL8A1P27658 744 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 ZNF143P52747 638 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 IGBP1P78318 339 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 SLC7A5Q01650 507 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 RING1Q06587 406 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 TCEA2Q15560 299 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 FOXD4L6Q3SYB3 417 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 ZBTB37Q5TC79 503 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 SLC6A19Q695T7 634 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 FOXD4L3Q6VB84 417 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 C1orf229Q6ZS94 237 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 MCATQ8IVS2 390 aaKnown RBP6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 MRPL41Q8IXM3 137 aaKnown RBP6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 JMYQ8N9B5 988 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 RNF214Q8ND24 703 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 ZSWIM2Q8NEG5 633 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 MICAL1Q8TDZ2 1067 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 WDR89Q96FK6 387 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 RNF208Q9H0X6 261 aa6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 CWC22Q9HCG8 908 aaKnown RBP6.76□□□□□ -1.33
HMGB3P18-201ENST00000406327 ESYT3A0FGR9 886 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 MEGF11A6BM72 1044 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 B2RBV5 119 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 TM4SF5O14894 197 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 TMPRSS2O15393 492 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 ADAM11O75078 769 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 ANAPC15P60006 121 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 AKAP4Q5JQC9 854 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 NUTM2GQ5VZR2 741 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 ILDR2Q71H61 639 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 KIAA0907Q7Z7F0 614 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 FBXO11Q86XK2 927 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 PHACTR4Q8IZ21 702 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 SMARCC1Q92922 1105 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 ACSF2Q96CM8 615 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 TMEM87BQ96K49 555 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 SLC26A8Q96RN1 970 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 SLC9A7Q96T83 725 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 SUGCTQ9HAC7 445 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 CRIM1Q9NZV1 1036 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 ZMYM5Q9UJ78 669 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 CSADQ9Y600 493 aa6.75□□□□□ -1.33
HMGB3P18-201ENST00000406327 CCDC163A0A0D9SF12 145 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 SHISA8B8ZZ34 492 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 DDX3YO15523 660 aaKnown RBP6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 DEAF1O75398 565 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 ACRP10323 421 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 DGKGP49619 791 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 GNPTABQ3T906 1256 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 TMEM67Q5HYA8 995 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 PPM1JQ5JR12 505 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 KIAA1211LQ6NV74 962 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 FILIP1Q7Z7B0 1213 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 SGSM3Q96HU1 749 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 TMPRSS13Q9BYE2 586 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 PIDD1Q9HB75 910 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 PFDN2Q9UHV9 154 aa6.74□□□□□ -1.33
HMGB3P18-201ENST00000406327 ZNF214Q9UL59 606 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms