RNA–Protein interactions for RNA: ENST00000404319.1

NIP7P3-201, Transcript of NIP7, nucleolar pre-rRNA processing protein pseudogene 3, humanhuman

BASIC

Gene NIP7P3, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7P3-201ENST00000404319 SSH1Q8WYL5 1049 aa10.88□□□□□ -0.67
NIP7P3-201ENST00000404319 SYMPKQ92797 1274 aaKnown RBP10.88□□□□□ -0.67
NIP7P3-201ENST00000404319 EDC3Q96F86 508 aaKnown RBP10.88□□□□□ -0.67
NIP7P3-201ENST00000404319 NEUROD6Q96NK8 337 aa10.88□□□□□ -0.67
NIP7P3-201ENST00000404319 SENP6Q9GZR1 1112 aaPredicted RBP10.88□□□□□ -0.67
NIP7P3-201ENST00000404319 RAI14Q9P0K7 980 aa10.88□□□□□ -0.67
NIP7P3-201ENST00000404319 LRP2BPQ9P2M1 347 aa10.88□□□□□ -0.67
NIP7P3-201ENST00000404319 DOCK1Q14185 1865 aa10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 DNAH12Q6ZR08 3092 aa10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 IGSF3O75054 1194 aa10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 ERVK-9P63128 1117 aa10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 ERVK-24P63145 666 aa10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 MTMR2Q13614 643 aa10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 LHX8Q68G74 356 aa10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 CCDC84Q86UT8 332 aaPredicted RBP10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 FAM9BQ8IZU0 186 aa10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 SPATA5Q8NB90 893 aa10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 XAGE2Q96GT9 111 aa10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 APBA2Q99767 749 aa10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 IVNS1ABPQ9Y6Y0 642 aa10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 COL2A1P02458 1487 aaPredicted RBP10.87□□□□□ -0.67
NIP7P3-201ENST00000404319 PFASO15067 1338 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 A0A1B0GUL7 405 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 UQCRFS1P1P0C7P4 283 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 ADORA1P30542 326 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 DSG3P32926 999 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 ATP2B2Q01814 1243 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 CACNB1Q02641 598 aaPredicted RBP10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 LRRC26Q2I0M4 334 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 USP17L2Q6R6M4 530 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 GPR142Q7Z601 462 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 ARRDC4Q8NCT1 418 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 NSUN4Q96CB9 384 aaKnown RBP10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 RBPJLQ9UBG7 517 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 RABGAP1Q9Y3P9 1069 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 RFX7Q2KHR2 1363 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 LAMA2P24043 3122 aaKnown RBP10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 PTPRFP10586 1907 aa10.86□□□□□ -0.67
NIP7P3-201ENST00000404319 SLC15A5A6NIM6 579 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 FAM196BA6NMK8 535 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 HLA-DOAP06340 250 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 GNAI3P08754 354 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 CNGA1P29973 690 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 USP14P54578 494 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 MAP2K5Q13163 448 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 MORN1Q5T089 497 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 LPAR1Q92633 364 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 USP6NLQ92738 828 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 API5Q9BZZ5 524 aaKnown RBP10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 SMC4Q9NTJ3 1288 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 SLC5A4Q9NY91 659 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 PHIPQ8WWQ0 1821 aa10.85□□□□□ -0.67
NIP7P3-201ENST00000404319 DDX60LQ5H9U9 1706 aaKnown RBP10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 ALPK3Q96L96 1907 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 USP17L15C9J2P7 530 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 USP17L13C9JLJ4 530 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 USP17L11C9JVI0 530 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 USP17L18D6R9N7 530 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 USP17L22D6RA61 530 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 USP17L17D6RBQ6 530 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 USP17L19D6RCP7 530 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 USP17L20D6RJB6 530 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 SRGAP3O43295 1099 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 SLURP2P0DP57 97 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 CCND3P30281 292 aaPredicted RBP10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 USP17L24Q0WX57 530 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 TFCP2Q12800 502 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 Q3C1V9 767 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 WDR78Q5VTH9 848 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 NAA16Q6N069 864 aaPredicted RBP10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 CERS3Q8IU89 383 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 FAM161BQ96MY7 647 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 PAGR1Q9BTK6 254 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 TXNRD2Q9NNW7 524 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 HMG20BQ9P0W2 317 aa10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 PA2G4Q9UQ80 394 aaKnown RBP10.84□□□□□ -0.67
NIP7P3-201ENST00000404319 KBTBD13C9JR72 458 aa10.83□□□□□ -0.68
NIP7P3-201ENST00000404319 DNM1LO00429 736 aa10.83□□□□□ -0.68
NIP7P3-201ENST00000404319 STRNO43815 780 aa10.83□□□□□ -0.68
NIP7P3-201ENST00000404319 CT47B1P0C2W7 299 aaPredicted RBP10.83□□□□□ -0.68
NIP7P3-201ENST00000404319 PPP4CP60510 307 aa10.83□□□□□ -0.68
NIP7P3-201ENST00000404319 G3BP1Q13283 466 aaKnown RBP eCLIP10.83□□□□□ -0.68
NIP7P3-201ENST00000404319 METTL16Q86W50 562 aaKnown RBP10.83□□□□□ -0.68
NIP7P3-201ENST00000404319 GUCD1Q96NT3 240 aa10.83□□□□□ -0.68
NIP7P3-201ENST00000404319 SEMA6BQ9H3T3 888 aa10.83□□□□□ -0.68
NIP7P3-201ENST00000404319 PRDM6Q9NQX0 595 aa10.83□□□□□ -0.68
NIP7P3-201ENST00000404319 DDX20Q9UHI6 824 aaKnown RBP10.83□□□□□ -0.68
NIP7P3-201ENST00000404319 ATN1P54259 1190 aaPredicted RBP10.82□□□□□ -0.68
NIP7P3-201ENST00000404319 SMAD3P84022 425 aaKnown RBP10.82□□□□□ -0.68
NIP7P3-201ENST00000404319 CCL14Q16627 93 aa10.82□□□□□ -0.68
NIP7P3-201ENST00000404319 CCDC158Q5M9N0 1113 aa10.82□□□□□ -0.68
NIP7P3-201ENST00000404319 TBC1D9Q6ZT07 1266 aa10.82□□□□□ -0.68
NIP7P3-201ENST00000404319 DPP9Q86TI2 863 aa10.82□□□□□ -0.68
NIP7P3-201ENST00000404319 MAFAQ8NHW3 353 aaPredicted RBP10.82□□□□□ -0.68
NIP7P3-201ENST00000404319 SH3RF3Q8TEJ3 882 aaPredicted RBP10.82□□□□□ -0.68
NIP7P3-201ENST00000404319 TGFBRAP1Q8WUH2 860 aa10.82□□□□□ -0.68
NIP7P3-201ENST00000404319 CDX2Q99626 313 aaPredicted RBP10.82□□□□□ -0.68
NIP7P3-201ENST00000404319 FEZ1Q99689 392 aa10.82□□□□□ -0.68
NIP7P3-201ENST00000404319 HOXC10Q9NYD6 342 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms