RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 TMEM87BQ96K49 555 aa7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 KCNF1Q9H3M0 494 aa7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 ADAM30Q9UKF2 790 aa7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 PCOLCE2Q9UKZ9 415 aa7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 STRIP2Q9ULQ0 834 aa7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 RB1CC1Q8TDY2 1594 aa7.74□□□□□ -1.17
HMGB3P19-201ENST00000403971 GIPRP48546 466 aa7.73□□□□□ -1.17
HMGB3P19-201ENST00000403971 MCATQ8IVS2 390 aaKnown RBP7.73□□□□□ -1.17
HMGB3P19-201ENST00000403971 TMEM151AQ8N4L1 468 aa7.73□□□□□ -1.17
HMGB3P19-201ENST00000403971 FAM13CQ8NE31 585 aa7.73□□□□□ -1.17
HMGB3P19-201ENST00000403971 XAGE3Q8WTP9 111 aa7.73□□□□□ -1.17
HMGB3P19-201ENST00000403971 EZH1Q92800 747 aaPredicted RBP7.73□□□□□ -1.17
HMGB3P19-201ENST00000403971 TP53INP1Q96A56 240 aa7.73□□□□□ -1.17
HMGB3P19-201ENST00000403971 CRBNQ96SW2 442 aa7.73□□□□□ -1.17
HMGB3P19-201ENST00000403971 DNAJC2Q99543 621 aaKnown RBP7.73□□□□□ -1.17
HMGB3P19-201ENST00000403971 ARSHQ5FYA8 562 aa7.72□□□□□ -1.17
HMGB3P19-201ENST00000403971 PRAMEF13Q5VWM6 474 aa7.72□□□□□ -1.17
HMGB3P19-201ENST00000403971 BEND4Q6ZU67 534 aa7.72□□□□□ -1.17
HMGB3P19-201ENST00000403971 MRPL41Q8IXM3 137 aaKnown RBP7.72□□□□□ -1.17
HMGB3P19-201ENST00000403971 TMEM40Q8WWA1 233 aa7.72□□□□□ -1.17
HMGB3P19-201ENST00000403971 TPSG1Q9NRR2 321 aa7.72□□□□□ -1.17
HMGB3P19-201ENST00000403971 GMIPQ9P107 970 aa7.72□□□□□ -1.17
HMGB3P19-201ENST00000403971 FAM95CA0A1B0GW59 222 aa7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 MEIS3P2A8K0S8 358 aa7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 RBAK-RBAKDNI3L0D1 243 aa7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 SMAD7O15105 426 aaKnown RBP7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 DHX15O43143 795 aaKnown RBP7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 IMPDH2P12268 514 aa7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 CDK5R2Q13319 367 aa7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 MLECQ14165 292 aa7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 NFKBIBQ15653 356 aa7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 SLC6A19Q695T7 634 aa7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 ARMCX6Q7L4S7 300 aa7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 KCT2Q8NC54 265 aa7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 RBBP8NLQ8NC74 664 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 ATG4CQ96DT6 458 aa7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 YIPF2Q9BWQ6 316 aa7.71□□□□□ -1.18
HMGB3P19-201ENST00000403971 FAM86C2PA6NEL3 165 aa7.7□□□□□ -1.18
HMGB3P19-201ENST00000403971 STK10O94804 968 aaKnown RBP7.7□□□□□ -1.18
HMGB3P19-201ENST00000403971 POLR2BP30876 1174 aaKnown RBP7.7□□□□□ -1.18
HMGB3P19-201ENST00000403971 MAP7Q14244 749 aa7.7□□□□□ -1.18
HMGB3P19-201ENST00000403971 SEZ6L2Q6UXD5 910 aa7.7□□□□□ -1.18
HMGB3P19-201ENST00000403971 NLRC3Q7RTR2 1065 aa7.7□□□□□ -1.18
HMGB3P19-201ENST00000403971 UBXN4Q92575 508 aa7.7□□□□□ -1.18
HMGB3P19-201ENST00000403971 C1GALT1Q9NS00 363 aa7.7□□□□□ -1.18
HMGB3P19-201ENST00000403971 HMX2A2RU54 273 aa7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 CST3P01034 146 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 ACRP10323 421 aa7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 NME1P15531 152 aaKnown RBP7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 CAP2P40123 477 aa7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 DOC2BQ14184 412 aa7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 LRRFIP1Q32MZ4 808 aaKnown RBP7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 ANKS3Q6ZW76 656 aa7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 SHISA5Q8N114 240 aa7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 HNRNPLLQ8WVV9 542 aaKnown RBP7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 KIF2CQ99661 725 aa7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 FOXQ1Q9C009 403 aa7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 TNKS2Q9H2K2 1166 aa7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 CNNM2Q9H8M5 875 aa7.69□□□□□ -1.18
HMGB3P19-201ENST00000403971 LRIG2O94898 1065 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 RAG1P15918 1043 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 YARSP54577 528 aaKnown RBP7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 ZYXQ15942 572 aaKnown RBP7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 CDCP2Q5VXM1 449 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 PAOXQ6QHF9 649 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 CLEC10AQ8IUN9 316 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 SLFN12Q8IYM2 578 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 PHACTR4Q8IZ21 702 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 PMFBP1Q8TBY8 1022 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 PSMG3-AS1Q96PY0 264 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 SLC9A7Q96T83 725 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 FAM83CQ9BQN1 747 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 C7orf69Q9H7B7 122 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 PRKAG3Q9UGI9 489 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 RAXQ9Y2V3 346 aa7.68□□□□□ -1.18
HMGB3P19-201ENST00000403971 ADMP35318 185 aa7.67□□□□□ -1.18
HMGB3P19-201ENST00000403971 PPP2R5EQ16537 467 aa7.67□□□□□ -1.18
HMGB3P19-201ENST00000403971 PRR23CQ6ZRP0 262 aa7.67□□□□□ -1.18
HMGB3P19-201ENST00000403971 OR6P1Q8NGX9 317 aa7.67□□□□□ -1.18
HMGB3P19-201ENST00000403971 RIN3Q8TB24 985 aa7.67□□□□□ -1.18
HMGB3P19-201ENST00000403971 BAHD1Q8TBE0 780 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P19-201ENST00000403971 ARMC5Q96C12 935 aa7.67□□□□□ -1.18
HMGB3P19-201ENST00000403971 MIPEPQ99797 713 aa7.67□□□□□ -1.18
HMGB3P19-201ENST00000403971 TM9SF2Q99805 663 aa7.67□□□□□ -1.18
HMGB3P19-201ENST00000403971 STOML1Q9UBI4 398 aa7.67□□□□□ -1.18
HMGB3P19-201ENST00000403971 A0A1W2PQH9 124 aa7.66□□□□□ -1.18
HMGB3P19-201ENST00000403971 LEFTY1O75610 366 aa7.66□□□□□ -1.18
HMGB3P19-201ENST00000403971 PROCP04070 461 aa7.66□□□□□ -1.18
HMGB3P19-201ENST00000403971 GUCY2CP25092 1073 aa7.66□□□□□ -1.18
HMGB3P19-201ENST00000403971 RBL2Q08999 1139 aa7.66□□□□□ -1.18
HMGB3P19-201ENST00000403971 TTC6Q86TZ1 520 aa7.66□□□□□ -1.18
HMGB3P19-201ENST00000403971 TOP6BLQ8N6T0 577 aa7.66□□□□□ -1.18
HMGB3P19-201ENST00000403971 TNFRSF10CO14798 259 aa7.65□□□□□ -1.18
HMGB3P19-201ENST00000403971 KLF4O43474 513 aa7.65□□□□□ -1.18
HMGB3P19-201ENST00000403971 UBOX5O94941 541 aa7.65□□□□□ -1.18
HMGB3P19-201ENST00000403971 SLITRK5O94991 958 aa7.65□□□□□ -1.18
HMGB3P19-201ENST00000403971 UNC5AQ6ZN44 842 aa7.65□□□□□ -1.18
HMGB3P19-201ENST00000403971 CKAP2LQ8IYA6 745 aa7.65□□□□□ -1.18
HMGB3P19-201ENST00000403971 MFSD2AQ8NA29 543 aa7.65□□□□□ -1.18
HMGB3P19-201ENST00000403971 PPP1R13LQ8WUF5 828 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms