RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ZNF654Q8IZM8 581 aa13.67□□□□□ -0.22
RBM39-206ENST00000403542 CRACR2BQ8N4Y2 399 aaPredicted RBP13.67□□□□□ -0.22
RBM39-206ENST00000403542 FANCBQ8NB91 859 aa13.67□□□□□ -0.22
RBM39-206ENST00000403542 LPIN2Q92539 896 aa13.67□□□□□ -0.22
RBM39-206ENST00000403542 RAI14Q9P0K7 980 aa13.67□□□□□ -0.22
RBM39-206ENST00000403542 JAG2Q9Y219 1238 aa13.67□□□□□ -0.22
RBM39-206ENST00000403542 V9GY48 417 aaPredicted RBP13.67□□□□□ -0.22
RBM39-206ENST00000403542 KIF1AQ12756 1690 aa13.67□□□□□ -0.22
RBM39-206ENST00000403542 PLEKHA8P1O95397 391 aa13.67□□□□□ -0.22
RBM39-206ENST00000403542 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
RBM39-206ENST00000403542 TRIM28Q13263 835 aaKnown RBP13.67□□□□□ -0.22
RBM39-206ENST00000403542 SART3Q15020 963 aaKnown RBP13.67□□□□□ -0.22
RBM39-206ENST00000403542 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
RBM39-206ENST00000403542 HOOK1Q9UJC3 728 aaKnown RBP13.67□□□□□ -0.22
RBM39-206ENST00000403542 PES1O00541 588 aaKnown RBP13.66□□□□□ -0.22
RBM39-206ENST00000403542 CYP7A1P22680 504 aa13.66□□□□□ -0.22
RBM39-206ENST00000403542 WWC2Q6AWC2 1192 aa13.66□□□□□ -0.22
RBM39-206ENST00000403542 IGSF22Q8N9C0 903 aa13.66□□□□□ -0.22
RBM39-206ENST00000403542 SRCAPQ6ZRS2 3230 aa13.66□□□□□ -0.22
RBM39-206ENST00000403542 CCP110O43303 1012 aa13.66□□□□□ -0.22
RBM39-206ENST00000403542 PDE8AO60658 829 aa13.66□□□□□ -0.22
RBM39-206ENST00000403542 RAD9BQ6WBX8 426 aa13.66□□□□□ -0.22
RBM39-206ENST00000403542 SYMPKQ92797 1274 aaKnown RBP13.66□□□□□ -0.22
RBM39-206ENST00000403542 PARD6BQ9BYG5 372 aa13.66□□□□□ -0.22
RBM39-206ENST00000403542 ALS2Q96Q42 1657 aa13.66□□□□□ -0.22
RBM39-206ENST00000403542 TNKSO95271 1327 aa13.66□□□□□ -0.22
RBM39-206ENST00000403542 ACTN4O43707 911 aaKnown RBP13.65□□□□□ -0.22
RBM39-206ENST00000403542 NMT2O60551 498 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 SLC5A1P13866 664 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 LIFRP42702 1097 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 MORC3Q14149 939 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 WDR19Q8NEZ3 1342 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 UQCRFS1P1P0C7P4 283 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 VEGFAP15692 232 aaPredicted RBP13.65□□□□□ -0.22
RBM39-206ENST00000403542 ZNF18P17022 549 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 ARID4AP29374 1257 aaPredicted RBP13.65□□□□□ -0.22
RBM39-206ENST00000403542 CASP14P31944 242 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 GYG1P46976 350 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 DYNLL1P63167 89 aaKnown RBP13.65□□□□□ -0.22
RBM39-206ENST00000403542 RILPL1Q5EBL4 403 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 SUSD4Q5VX71 490 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 SMIM5Q71RC9 77 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 NUTM2AQ8IVF1 878 aaPredicted RBP13.65□□□□□ -0.22
RBM39-206ENST00000403542 ACRBPQ8NEB7 543 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 CARD10Q9BWT7 1032 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 NACAP1Q9BZK3 213 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 VPS16Q9H269 839 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 SUGCTQ9HAC7 445 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 FAM53CQ9NYF3 392 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 COL18A1P39060 1754 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 EFCAB8A8MWE9 144 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 DEXIO95424 95 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 TBX2Q13207 712 aaPredicted RBP13.65□□□□□ -0.22
RBM39-206ENST00000403542 MCM6Q14566 821 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
RBM39-206ENST00000403542 PPFIBP1Q86W92 1011 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 MLKLQ8NB16 471 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 CDC5LQ99459 802 aaKnown RBP13.65□□□□□ -0.22
RBM39-206ENST00000403542 KRT23Q9C075 422 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 BTG4Q9NY30 223 aa13.65□□□□□ -0.22
RBM39-206ENST00000403542 ADAMTS3O15072 1205 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 STX10O60499 249 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 ZRANB2O95218 330 aaKnown RBP eCLIP13.64□□□□□ -0.234e-8■■■■■ 32.7
RBM39-206ENST00000403542 TBC1D8O95759 1140 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 CYP19A1P11511 503 aaPredicted RBP13.64□□□□□ -0.23
RBM39-206ENST00000403542 OAS2P29728 719 aaKnown RBP13.64□□□□□ -0.23
RBM39-206ENST00000403542 KCNJ6P48051 423 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 ZNF569Q5MCW4 686 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 WASF1Q92558 559 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 ACSBG1Q96GR2 724 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 PLIN2Q99541 437 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 TFR2Q9UP52 801 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 CTNND2Q9UQB3 1225 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 TRIM75PA6NK02 468 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 AKR1B15C9JRZ8 316 aaPredicted RBP13.64□□□□□ -0.23
RBM39-206ENST00000403542 RHOXF2BP0C7M4 288 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 PPARAQ07869 468 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 DPYDQ12882 1025 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 GPIHBP1Q8IV16 184 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 ENOX1Q8TC92 643 aaKnown RBP13.64□□□□□ -0.23
RBM39-206ENST00000403542 RHOXF2Q9BQY4 288 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 MRFAP1Q9Y605 127 aa13.64□□□□□ -0.23
RBM39-206ENST00000403542 MAP3K9P80192 1104 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 CC2D1AQ6P1N0 951 aaPredicted RBP13.63□□□□□ -0.23
RBM39-206ENST00000403542 KIFC2Q96AC6 838 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 CNNM2Q9H8M5 875 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 SRPRBQ9Y5M8 271 aaKnown RBP13.63□□□□□ -0.23
RBM39-206ENST00000403542 AKAP11Q9UKA4 1901 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 SYNRGQ9UMZ2 1314 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 C4AP0C0L4 1744 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 C4BP0C0L5 1744 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 NUP188Q5SRE5 1749 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 FAM237AA0A1B0GTK4 181 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 FXR1P51114 621 aaKnown RBP eCLIP13.63□□□□□ -0.23
RBM39-206ENST00000403542 PLCD1P51178 756 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 NR1I3Q14994 352 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 FAM47AQ5JRC9 791 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 PAGE5Q96GU1 130 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms