RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 RNF214Q8ND24 703 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 OR6P1Q8NGX9 317 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 MRFAP1L1Q96HT8 127 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 TMEM87BQ96K49 555 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 NBPF4Q96M43 638 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 KIF2CQ99661 725 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 CNNM2Q9H8M5 875 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 KANSL2Q9H9L4 492 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 PIDD1Q9HB75 910 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 SSU72Q9NP77 194 aaKnown RBP5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 MRPL42Q9Y6G3 142 aaKnown RBP5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 FANCGO15287 622 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 RAG1P15918 1043 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 NOS3P29474 1203 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 IREB2P48200 963 aaKnown RBP5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 CASP7P55210 303 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 HNRNPUQ00839 825 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 MLECQ14165 292 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 SLBPQ14493 270 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 LRRFIP1Q32MZ4 808 aaKnown RBP5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 PRAMEF13Q5VWM6 474 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 MRM1Q6IN84 353 aaKnown RBP5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 PODNQ7Z5L7 613 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 HID1Q8IV36 788 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 PHACTR4Q8IZ21 702 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 BAHD1Q8TBE0 780 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 UBL7Q96S82 380 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 TM9SF2Q99805 663 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 ATXN3LQ9H3M9 355 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 AKTIPQ9H8T0 292 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 SUGCTQ9HAC7 445 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 TBX22Q9Y458 520 aa5.83□□□□□ -1.48
HMGB1P17-201ENST00000403495 TLDC2A0PJX2 215 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 NFE2L2Q16236 605 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 CDCP2Q5VXM1 449 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 TDRD10Q5VZ19 366 aaKnown RBP5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 CDPF1Q6NVV7 123 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 CDC37L1Q7L3B6 337 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 MCATQ8IVS2 390 aaKnown RBP5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 FAM178BQ8IXR5 827 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 SMYD4Q8IYR2 804 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 BEND7Q8N7W2 519 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 ZNF507Q8TCN5 953 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 DCAF11Q8TEB1 546 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 FBLIM1Q8WUP2 373 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 ZNF512BQ96KM6 892 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 DNAJC7Q99615 494 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 NOP53Q9NZM5 478 aaKnown RBP5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 PFDN2Q9UHV9 154 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 ADAM30Q9UKF2 790 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 TMA7Q9Y2S6 64 aaKnown RBP5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 DAGLAQ9Y4D2 1042 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 TACC3Q9Y6A5 838 aa5.82□□□□□ -1.48
HMGB1P17-201ENST00000403495 DYNC1LI2O43237 492 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 SART1O43290 800 aaKnown RBP5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 GAS2O43903 313 aaKnown RBP5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 UBOX5O94941 541 aa5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 SPATA31C1P0DKV0 1188 aa5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 FXNQ16595 210 aa5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 SGO2Q562F6 1265 aa5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 ANKRD34AQ69YU3 496 aa5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 ZNF662Q6ZS27 426 aa5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 PPFIBP1Q86W92 1011 aa5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 TMEM192Q8IY95 271 aa5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 LILRB2Q8N423 598 aa5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 C19orf47Q8N9M1 422 aaKnown RBP5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 WFDC12Q8WWY7 111 aa5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 MSRB2Q9Y3D2 182 aa5.81□□□□□ -1.48
HMGB1P17-201ENST00000403495 SYNGAP1Q96PV0 1343 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 TNFRSF10CO14798 259 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 PDPK1O15530 556 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 TP53P04637 393 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 NFICP08651 508 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 USP11P51784 963 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 YARSP54577 528 aaKnown RBP5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 SDE2Q6IQ49 451 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 KIAA1211LQ6NV74 962 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 VHLLQ6RSH7 139 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 SPATC1Q76KD6 591 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 ARMCX6Q7L4S7 300 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 MRPL41Q8IXM3 137 aaKnown RBP5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 TMEM130Q8N3G9 435 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 KLHL6Q8WZ60 621 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 MKL1Q969V6 931 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 LENG1Q96BZ8 264 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 MEGF10Q96KG7 1140 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 SLC6A18Q96N87 628 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 GSX1Q9H4S2 264 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 CADPSQ9ULU8 1353 aa5.8□□□□□ -1.48
HMGB1P17-201ENST00000403495 C9IYK1 514 aa5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 PIK3R2O00459 728 aa5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 DIAPH1O60610 1272 aaKnown RBP5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 RXRBP28702 533 aa5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 GBP1P32455 592 aa5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 CDK5R2Q13319 367 aa5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 TCEAL1Q15170 157 aa5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 GNPTABQ3T906 1256 aa5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 SLC6A19Q695T7 634 aa5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 SLFN12Q8IYM2 578 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms