RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 MICU3Q86XE3 530 aa22.73■■□□□ 1.23
CCDC47-202ENST00000403162 CNNM3Q8NE01 707 aa22.73■■□□□ 1.23
CCDC47-202ENST00000403162 FANCLQ9NW38 375 aa22.73■■□□□ 1.23
CCDC47-202ENST00000403162 MYO5AQ9Y4I1 1855 aaKnown RBP22.73■■□□□ 1.23
CCDC47-202ENST00000403162 RANBP6O60518 1105 aaKnown RBP22.72■■□□□ 1.23
CCDC47-202ENST00000403162 MYH3P11055 1940 aa22.72■■□□□ 1.23
CCDC47-202ENST00000403162 RXRAP19793 462 aa22.72■■□□□ 1.23
CCDC47-202ENST00000403162 FOXP4Q8IVH2 680 aaPredicted RBP22.72■■□□□ 1.23
CCDC47-202ENST00000403162 CNBD1Q8NA66 436 aa22.72■■□□□ 1.23
CCDC47-202ENST00000403162 LY9Q9HBG7 655 aa22.72■■□□□ 1.23
CCDC47-202ENST00000403162 FAM217BQ9NTX9 383 aaPredicted RBP22.72■■□□□ 1.23
CCDC47-202ENST00000403162 PCDHA5Q9Y5H7 936 aa22.72■■□□□ 1.23
CCDC47-202ENST00000403162 B4E1Z4 1266 aa22.72■■□□□ 1.23
CCDC47-202ENST00000403162 TMEM232C9JQI7 657 aa22.72■■□□□ 1.23
CCDC47-202ENST00000403162 MDM2Q00987 491 aaPredicted RBP22.72■■□□□ 1.23
CCDC47-202ENST00000403162 MSL1Q68DK7 614 aa22.72■■□□□ 1.23
CCDC47-202ENST00000403162 UBXN4Q92575 508 aa22.72■■□□□ 1.23
CCDC47-202ENST00000403162 SENP2Q9HC62 589 aa22.72■■□□□ 1.23
CCDC47-202ENST00000403162 GOLGA8AA7E2F4 631 aa22.71■■□□□ 1.23
CCDC47-202ENST00000403162 TADA3O75528 432 aa22.71■■□□□ 1.23
CCDC47-202ENST00000403162 SERPINB2P05120 415 aa22.71■■□□□ 1.23
CCDC47-202ENST00000403162 ITGA6P23229 1130 aa22.71■■□□□ 1.23
CCDC47-202ENST00000403162 DDR1Q08345 913 aa22.71■■□□□ 1.23
CCDC47-202ENST00000403162 TBX2Q13207 712 aaPredicted RBP22.71■■□□□ 1.23
CCDC47-202ENST00000403162 ALX1Q15699 326 aa22.71■■□□□ 1.23
CCDC47-202ENST00000403162 SLC10A5Q5PT55 438 aa22.71■■□□□ 1.23
CCDC47-202ENST00000403162 KRI1Q8N9T8 703 aaKnown RBP22.71■■□□□ 1.23
CCDC47-202ENST00000403162 INTS13Q9NVM9 706 aa22.71■■□□□ 1.23
CCDC47-202ENST00000403162 ARGLU1Q9NWB6 273 aaPredicted RBP22.71■■□□□ 1.23
CCDC47-202ENST00000403162 HOOK1Q9UJC3 728 aaKnown RBP22.71■■□□□ 1.23
CCDC47-202ENST00000403162 FANCGO15287 622 aa22.7■■□□□ 1.23
CCDC47-202ENST00000403162 LIFRP42702 1097 aa22.7■■□□□ 1.23
CCDC47-202ENST00000403162 PIH1D3Q9NQM4 214 aaKnown RBP22.7■■□□□ 1.23
CCDC47-202ENST00000403162 PARP3Q9Y6F1 533 aa22.7■■□□□ 1.23
CCDC47-202ENST00000403162 CHD4Q14839 1912 aa22.7■■□□□ 1.22
CCDC47-202ENST00000403162 LAMB2P55268 1798 aa22.7■■□□□ 1.22
CCDC47-202ENST00000403162 NID2Q14112 1375 aa22.7■■□□□ 1.22
CCDC47-202ENST00000403162 ANKRD18BA2A2Z9 1011 aa22.7■■□□□ 1.22
CCDC47-202ENST00000403162 EFCAB8A8MWE9 144 aa22.7■■□□□ 1.22
CCDC47-202ENST00000403162 ZRANB2O95218 330 aaKnown RBP eCLIP22.7■■□□□ 1.22
CCDC47-202ENST00000403162 APPP05067 770 aa22.7■■□□□ 1.22
CCDC47-202ENST00000403162 BMP6P22004 513 aa22.7■■□□□ 1.22
CCDC47-202ENST00000403162 CCDC152Q4G0S7 254 aa22.7■■□□□ 1.22
CCDC47-202ENST00000403162 VGLL2Q8N8G2 317 aa22.7■■□□□ 1.22
CCDC47-202ENST00000403162 MPHOSPH8Q99549 860 aa22.7■■□□□ 1.22
CCDC47-202ENST00000403162 ZNF532Q9HCE3 1301 aa22.69■■□□□ 1.22
CCDC47-202ENST00000403162 VWA3AA6NCI4 1184 aa22.69■■□□□ 1.22
CCDC47-202ENST00000403162 GOLGA6L9A6NEM1 432 aa22.69■■□□□ 1.22
CCDC47-202ENST00000403162 POLRMTO00411 1230 aaKnown RBP22.69■■□□□ 1.22
CCDC47-202ENST00000403162 TPM1P09493 284 aa22.69■■□□□ 1.22
CCDC47-202ENST00000403162 PNMA6AP0CW24 399 aaPredicted RBP22.69■■□□□ 1.22
CCDC47-202ENST00000403162 PDE4BQ07343 736 aa22.69■■□□□ 1.22
CCDC47-202ENST00000403162 LDHAL6AQ6ZMR3 332 aa22.69■■□□□ 1.22
CCDC47-202ENST00000403162 NFXL1Q6ZNB6 911 aa22.69■■□□□ 1.22
CCDC47-202ENST00000403162 C3orf67Q6ZVT6 689 aa22.69■■□□□ 1.22
CCDC47-202ENST00000403162 MNS1Q8NEH6 495 aa22.69■■□□□ 1.22
CCDC47-202ENST00000403162 PPP2R2CQ9Y2T4 447 aa22.69■■□□□ 1.22
CCDC47-202ENST00000403162 FMNL1O95466 1100 aaPredicted RBP22.69■■□□□ 1.22
CCDC47-202ENST00000403162 SSRP1Q08945 709 aaKnown RBP22.69■■□□□ 1.22
CCDC47-202ENST00000403162 TMEM67Q5HYA8 995 aa22.69■■□□□ 1.22
CCDC47-202ENST00000403162 NOSTRINQ8IVI9 506 aa22.69■■□□□ 1.22
CCDC47-202ENST00000403162 TCRBV5S4A2TA0A5A2 114 aa22.68■■□□□ 1.22
CCDC47-202ENST00000403162 URI1O94763 535 aaPredicted RBP22.68■■□□□ 1.22
CCDC47-202ENST00000403162 PDE6AP16499 860 aa22.68■■□□□ 1.22
CCDC47-202ENST00000403162 NT5DC1Q5TFE4 455 aa22.68■■□□□ 1.22
CCDC47-202ENST00000403162 PRR5LQ6MZQ0 368 aa22.68■■□□□ 1.22
CCDC47-202ENST00000403162 WASF1Q92558 559 aa22.68■■□□□ 1.22
CCDC47-202ENST00000403162 NLRP3Q96P20 1036 aa22.68■■□□□ 1.22
CCDC47-202ENST00000403162 QSER1Q2KHR3 1735 aa22.68■■□□□ 1.22
CCDC47-202ENST00000403162 TIAM2Q8IVF5 1701 aa22.68■■□□□ 1.22
CCDC47-202ENST00000403162 IDH1O75874 414 aaKnown RBP22.67■■□□□ 1.22
CCDC47-202ENST00000403162 ARID4AP29374 1257 aaPredicted RBP22.67■■□□□ 1.22
CCDC47-202ENST00000403162 STK11IPQ8N1F8 1099 aa22.67■■□□□ 1.22
CCDC47-202ENST00000403162 STRBPQ96SI9 672 aaKnown RBP22.67■■□□□ 1.22
CCDC47-202ENST00000403162 STX10O60499 249 aa22.67■■□□□ 1.22
CCDC47-202ENST00000403162 MMP10P09238 476 aa22.67■■□□□ 1.22
CCDC47-202ENST00000403162 ZNF18P17022 549 aa22.67■■□□□ 1.22
CCDC47-202ENST00000403162 GOLGA8FQ08AF8 430 aa22.67■■□□□ 1.22
CCDC47-202ENST00000403162 GOLGA8DPQ0D2H9 430 aa22.67■■□□□ 1.22
CCDC47-202ENST00000403162 BAG1Q99933 345 aaPredicted RBP22.67■■□□□ 1.22
CCDC47-202ENST00000403162 ST7Q9NRC1 585 aa22.67■■□□□ 1.22
CCDC47-202ENST00000403162 MAN1B1Q9UKM7 699 aa22.67■■□□□ 1.22
CCDC47-202ENST00000403162 IFNAR1P17181 557 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 ST5P78524 1137 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 POSTNQ15063 836 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 TMCO3Q6UWJ1 677 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 MLKLQ8NB16 471 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 SLC26A6Q9BXS9 759 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 PDGFDQ9GZP0 370 aaPredicted RBP22.66■■□□□ 1.22
CCDC47-202ENST00000403162 DACH1Q9UI36 760 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 SLC12A7Q9Y666 1083 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 CCDC66A2RUB6 948 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 MMP1P03956 469 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 SF3B3Q15393 1217 aaKnown RBP22.66■■□□□ 1.22
CCDC47-202ENST00000403162 ENOX1Q8TC92 643 aaKnown RBP22.66■■□□□ 1.22
CCDC47-202ENST00000403162 NOL10Q9BSC4 688 aaKnown RBP22.66■■□□□ 1.22
CCDC47-202ENST00000403162 CARD6Q9BX69 1037 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 SEC31BQ9NQW1 1179 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 CNNM1Q9NRU3 951 aa22.66■■□□□ 1.22
CCDC47-202ENST00000403162 ARAP2Q8WZ64 1704 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms