RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 FAM193AP78312 1265 aa10.05□□□□□ -0.8
LINC01139-201ENST00000400946 FANCCQ00597 558 aa10.05□□□□□ -0.8
LINC01139-201ENST00000400946 IER5LQ5T953 404 aa10.05□□□□□ -0.8
LINC01139-201ENST00000400946 FILIP1Q7Z7B0 1213 aa10.05□□□□□ -0.8
LINC01139-201ENST00000400946 SLC4A9Q96Q91 983 aa10.05□□□□□ -0.8
LINC01139-201ENST00000400946 SRRTQ9BXP5 876 aaKnown RBP10.05□□□□□ -0.8
LINC01139-201ENST00000400946 RNF26Q9BY78 433 aaPredicted RBP10.05□□□□□ -0.8
LINC01139-201ENST00000400946 XPO4Q9C0E2 1151 aaKnown RBP10.05□□□□□ -0.8
LINC01139-201ENST00000400946 L2HGDHQ9H9P8 463 aa10.05□□□□□ -0.8
LINC01139-201ENST00000400946 GNL3LQ9NVN8 582 aaKnown RBP10.05□□□□□ -0.8
LINC01139-201ENST00000400946 WWC3Q9ULE0 1092 aa10.05□□□□□ -0.8
LINC01139-201ENST00000400946 ZNF330Q9Y3S2 320 aaPredicted RBP10.05□□□□□ -0.8
LINC01139-201ENST00000400946 PDS5AQ29RF7 1337 aaKnown RBP10.05□□□□□ -0.8
LINC01139-201ENST00000400946 EP400Q96L91 3159 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 DOT1LQ8TEK3 1739 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 SEMA3EO15041 775 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 MBD4O95243 580 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 CALM1P0DP23 149 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 CALM2P0DP24 149 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 CALM3P0DP25 149 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 IGHMBP2P38935 993 aaKnown RBP10.04□□□□□ -0.8
LINC01139-201ENST00000400946 NCBP1Q09161 790 aaKnown RBP10.04□□□□□ -0.8
LINC01139-201ENST00000400946 WTAPQ15007 396 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 RTN1Q16799 776 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 OTUD7BQ6GQQ9 843 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 PI16Q6UXB8 463 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 MAGEB6Q8N7X4 407 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 PYM1Q9BRP8 204 aaKnown RBP10.04□□□□□ -0.8
LINC01139-201ENST00000400946 GTPBP4Q9BZE4 634 aaKnown RBP10.04□□□□□ -0.8
LINC01139-201ENST00000400946 CCDC87Q9NVE4 849 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 OGFRQ9NZT2 677 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 IFNKQ9P0W0 207 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 KCNH3Q9ULD8 1083 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 ZNF652Q9Y2D9 606 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 PCDHB13Q9Y5F0 798 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 ZNF804BA4D1E1 1349 aa10.04□□□□□ -0.8
LINC01139-201ENST00000400946 SMC2O95347 1197 aa10.03□□□□□ -0.8
LINC01139-201ENST00000400946 SLU7O95391 586 aaKnown RBP10.03□□□□□ -0.8
LINC01139-201ENST00000400946 FGRP09769 529 aa10.03□□□□□ -0.8
LINC01139-201ENST00000400946 SARSP49591 514 aaKnown RBP10.03□□□□□ -0.8
LINC01139-201ENST00000400946 SEMA3FQ13275 785 aa10.03□□□□□ -0.8
LINC01139-201ENST00000400946 RASGRF1Q13972 1273 aa10.03□□□□□ -0.8
LINC01139-201ENST00000400946 CLEC4GQ6UXB4 293 aa10.03□□□□□ -0.8
LINC01139-201ENST00000400946 MICU3Q86XE3 530 aa10.03□□□□□ -0.8
LINC01139-201ENST00000400946 CRACR2BQ8N4Y2 399 aaPredicted RBP10.03□□□□□ -0.8
LINC01139-201ENST00000400946 CNNM3Q8NE01 707 aa10.03□□□□□ -0.8
LINC01139-201ENST00000400946 ENOX1Q8TC92 643 aaKnown RBP10.03□□□□□ -0.8
LINC01139-201ENST00000400946 ESR2Q92731 530 aa10.03□□□□□ -0.8
LINC01139-201ENST00000400946 TMX1Q9H3N1 280 aa10.03□□□□□ -0.8
LINC01139-201ENST00000400946 EPB41L4AQ9HCS5 686 aaPredicted RBP10.03□□□□□ -0.8
LINC01139-201ENST00000400946 RBM28Q9NW13 759 aaKnown RBP10.03□□□□□ -0.8
LINC01139-201ENST00000400946 COLQQ9Y215 455 aaPredicted RBP10.03□□□□□ -0.8
LINC01139-201ENST00000400946 SRPRBQ9Y5M8 271 aaKnown RBP10.03□□□□□ -0.8
LINC01139-201ENST00000400946 PHLPP2Q6ZVD8 1323 aa10.03□□□□□ -0.8
LINC01139-201ENST00000400946 DLEC1Q9Y238 1755 aa10.03□□□□□ -0.8
LINC01139-201ENST00000400946 ZSCAN12O43309 604 aa10.02□□□□□ -0.8
LINC01139-201ENST00000400946 RANBP6O60518 1105 aaKnown RBP10.02□□□□□ -0.8
LINC01139-201ENST00000400946 ERCC5P28715 1186 aaPredicted RBP10.02□□□□□ -0.8
LINC01139-201ENST00000400946 GTF2E1P29083 439 aaPredicted RBP10.02□□□□□ -0.8
LINC01139-201ENST00000400946 MDM2Q00987 491 aaPredicted RBP10.02□□□□□ -0.8
LINC01139-201ENST00000400946 UBE4AQ14139 1066 aa10.02□□□□□ -0.8
LINC01139-201ENST00000400946 PPP4R3BQ5MIZ7 849 aa10.02□□□□□ -0.8
LINC01139-201ENST00000400946 TMC6Q7Z403 805 aa10.02□□□□□ -0.8
LINC01139-201ENST00000400946 VSTM4Q8IW00 320 aa10.02□□□□□ -0.8
LINC01139-201ENST00000400946 FAM177A1Q8N128 213 aaPredicted RBP10.02□□□□□ -0.8
LINC01139-201ENST00000400946 SYNE4Q8N205 404 aa10.02□□□□□ -0.8
LINC01139-201ENST00000400946 FANCBQ8NB91 859 aa10.02□□□□□ -0.8
LINC01139-201ENST00000400946 ZNF397Q8NF99 534 aaPredicted RBP10.02□□□□□ -0.8
LINC01139-201ENST00000400946 SMARCC1Q92922 1105 aaPredicted RBP10.02□□□□□ -0.8
LINC01139-201ENST00000400946 CCDC85AQ96PX6 553 aaPredicted RBP10.02□□□□□ -0.8
LINC01139-201ENST00000400946 BRIP1Q9BX63 1249 aa10.02□□□□□ -0.8
LINC01139-201ENST00000400946 SLC26A6Q9BXS9 759 aa10.02□□□□□ -0.8
LINC01139-201ENST00000400946 IQSEC3Q9UPP2 1182 aaPredicted RBP10.02□□□□□ -0.8
LINC01139-201ENST00000400946 MROH7-TTC4A0A0A0MT08 1334 aa10.02□□□□□ -0.8
LINC01139-201ENST00000400946 A0A1B0GUL6 1792 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 ARHGAP6O43182 974 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 TDO2P48775 406 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 UBASH3AP57075 661 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 SF3B3Q15393 1217 aaKnown RBP10.02□□□□□ -0.81
LINC01139-201ENST00000400946 FAM182BQ5T319 152 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 SUSD4Q5VX71 490 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 E4F1Q66K89 784 aaPredicted RBP10.02□□□□□ -0.81
LINC01139-201ENST00000400946 ARMCX5Q6P1M9 558 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 INTS5Q6P9B9 1019 aaKnown RBP10.02□□□□□ -0.81
LINC01139-201ENST00000400946 CREBRFQ8IUR6 639 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 DIS3L2Q8IYB7 885 aaKnown RBP10.02□□□□□ -0.81
LINC01139-201ENST00000400946 SPATA20Q8TB22 786 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 FERMT2Q96AC1 680 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 UBAC1Q9BSL1 405 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 HSD3B7Q9H2F3 369 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 FBXO2Q9UK22 296 aaPredicted RBP10.02□□□□□ -0.81
LINC01139-201ENST00000400946 SLC4A4Q9Y6R1 1079 aa10.02□□□□□ -0.81
LINC01139-201ENST00000400946 PRPF3O43395 683 aaKnown RBP10.01□□□□□ -0.81
LINC01139-201ENST00000400946 DDAH1O94760 285 aa10.01□□□□□ -0.81
LINC01139-201ENST00000400946 CAMTA2O94983 1202 aa10.01□□□□□ -0.81
LINC01139-201ENST00000400946 NTSR2O95665 410 aa10.01□□□□□ -0.81
LINC01139-201ENST00000400946 SERPINC1P01008 464 aa10.01□□□□□ -0.81
LINC01139-201ENST00000400946 TPM1P09493 284 aa10.01□□□□□ -0.81
LINC01139-201ENST00000400946 MARCKSP29966 332 aaPredicted RBP10.01□□□□□ -0.81
LINC01139-201ENST00000400946 TRAPPC10P48553 1259 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms