RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 PALD1Q9ULE6 856 aa17.9■□□□□ 0.46
VAMP1-203ENST00000400911 MGAMO43451 1857 aa17.9■□□□□ 0.46
VAMP1-203ENST00000400911 DOCK1Q14185 1865 aa17.9■□□□□ 0.46
VAMP1-203ENST00000400911 C19orf81C9J6K1 198 aa17.89■□□□□ 0.45
VAMP1-203ENST00000400911 USP17L10C9JJH3 530 aa17.89■□□□□ 0.45
VAMP1-203ENST00000400911 GDF11O95390 407 aa17.89■□□□□ 0.45
VAMP1-203ENST00000400911 PLCG2P16885 1265 aa17.89■□□□□ 0.45
VAMP1-203ENST00000400911 PPP4CP60510 307 aa17.89■□□□□ 0.45
VAMP1-203ENST00000400911 CACNB2Q08289 660 aaPredicted RBP17.89■□□□□ 0.45
VAMP1-203ENST00000400911 GPR153Q6NV75 609 aa17.89■□□□□ 0.45
VAMP1-203ENST00000400911 Q7L0L9 218 aa17.89■□□□□ 0.45
VAMP1-203ENST00000400911 ADGRA1Q86SQ6 560 aa17.89■□□□□ 0.45
VAMP1-203ENST00000400911 METTL16Q86W50 562 aaKnown RBP17.89■□□□□ 0.45
VAMP1-203ENST00000400911 CRACR2BQ8N4Y2 399 aaPredicted RBP17.89■□□□□ 0.45
VAMP1-203ENST00000400911 SOCS4Q8WXH5 440 aa17.89■□□□□ 0.45
VAMP1-203ENST00000400911 PFASO15067 1338 aa17.89■□□□□ 0.45
VAMP1-203ENST00000400911 PHIPQ8WWQ0 1821 aa17.88■□□□□ 0.45
VAMP1-203ENST00000400911 MAPK4P31152 587 aa17.88■□□□□ 0.45
VAMP1-203ENST00000400911 PDE3AQ14432 1141 aa17.88■□□□□ 0.45
VAMP1-203ENST00000400911 LRIT3Q3SXY7 679 aa17.88■□□□□ 0.45
VAMP1-203ENST00000400911 TTC39AQ5SRH9 613 aa17.88■□□□□ 0.45
VAMP1-203ENST00000400911 POTEEQ6S8J3 1075 aa17.88■□□□□ 0.45
VAMP1-203ENST00000400911 CCAR1Q8IX12 1150 aaKnown RBP17.88■□□□□ 0.45
VAMP1-203ENST00000400911 TDHQ8IZJ6 230 aa17.88■□□□□ 0.45
VAMP1-203ENST00000400911 USP6NLQ92738 828 aa17.88■□□□□ 0.45
VAMP1-203ENST00000400911 TRIM34Q9BYJ4 488 aa17.88■□□□□ 0.45
VAMP1-203ENST00000400911 UBE2OQ9C0C9 1292 aaKnown RBP17.88■□□□□ 0.45
VAMP1-203ENST00000400911 PORCNQ9H237 461 aa17.88■□□□□ 0.45
VAMP1-203ENST00000400911 SAP30BPQ9UHR5 308 aaKnown RBP17.88■□□□□ 0.45
VAMP1-203ENST00000400911 TNNQ9UQP3 1299 aa17.88■□□□□ 0.45
VAMP1-203ENST00000400911 FLT1P17948 1338 aa17.88■□□□□ 0.45
VAMP1-203ENST00000400911 ZKSCAN1P17029 563 aaPredicted RBP17.87■□□□□ 0.45
VAMP1-203ENST00000400911 ERVK-9P63128 1117 aa17.87■□□□□ 0.45
VAMP1-203ENST00000400911 ERVK-24P63145 666 aa17.87■□□□□ 0.45
VAMP1-203ENST00000400911 CCL14Q16627 93 aa17.87■□□□□ 0.45
VAMP1-203ENST00000400911 GPR142Q7Z601 462 aa17.87■□□□□ 0.45
VAMP1-203ENST00000400911 TRMT44Q8IYL2 757 aaKnown RBP17.87■□□□□ 0.45
VAMP1-203ENST00000400911 PAGR1Q9BTK6 254 aa17.87■□□□□ 0.45
VAMP1-203ENST00000400911 EMILIN3Q9NT22 766 aa17.87■□□□□ 0.45
VAMP1-203ENST00000400911 ZBTB21Q9ULJ3 1066 aa17.87■□□□□ 0.45
VAMP1-203ENST00000400911 CYP2E1P05181 493 aaPredicted RBP17.86■□□□□ 0.45
VAMP1-203ENST00000400911 COL6A1P12109 1028 aa17.86■□□□□ 0.45
VAMP1-203ENST00000400911 TRIM27P14373 513 aa17.86■□□□□ 0.45
VAMP1-203ENST00000400911 CCND3P30281 292 aaPredicted RBP17.86■□□□□ 0.45
VAMP1-203ENST00000400911 MORN1Q5T089 497 aa17.86■□□□□ 0.45
VAMP1-203ENST00000400911 LHX8Q68G74 356 aa17.86■□□□□ 0.45
VAMP1-203ENST00000400911 PLEKHH3Q7Z736 793 aa17.86■□□□□ 0.45
VAMP1-203ENST00000400911 DBNDD2Q9BQY9 259 aa17.86■□□□□ 0.45
VAMP1-203ENST00000400911 GINM1Q9NU53 330 aa17.86■□□□□ 0.45
VAMP1-203ENST00000400911 IPO8O15397 1037 aaKnown RBP17.85■□□□□ 0.45
VAMP1-203ENST00000400911 PTPRFP10586 1907 aa17.85■□□□□ 0.45
VAMP1-203ENST00000400911 RGS2P41220 211 aa17.85■□□□□ 0.45
VAMP1-203ENST00000400911 DYNLL1P63167 89 aaKnown RBP17.85■□□□□ 0.45
VAMP1-203ENST00000400911 LRRC26Q2I0M4 334 aa17.85■□□□□ 0.45
VAMP1-203ENST00000400911 TNNI3KQ59H18 835 aa17.85■□□□□ 0.45
VAMP1-203ENST00000400911 CCDC158Q5M9N0 1113 aa17.85■□□□□ 0.45
VAMP1-203ENST00000400911 FPGT-TNNI3KV9GXZ4 949 aa17.85■□□□□ 0.45
VAMP1-203ENST00000400911 ZAP70P43403 619 aa17.84■□□□□ 0.45
VAMP1-203ENST00000400911 USP17L2Q6R6M4 530 aa17.84■□□□□ 0.45
VAMP1-203ENST00000400911 ATF7IPQ6VMQ6 1270 aa17.84■□□□□ 0.45
VAMP1-203ENST00000400911 GTF3C2Q8WUA4 911 aaPredicted RBP17.84■□□□□ 0.45
VAMP1-203ENST00000400911 FRAT1Q92837 279 aaPredicted RBP17.84■□□□□ 0.45
VAMP1-203ENST00000400911 CLUAP1Q96AJ1 413 aa17.84■□□□□ 0.45
VAMP1-203ENST00000400911 GPR108Q9NPR9 543 aa17.84■□□□□ 0.45
VAMP1-203ENST00000400911 PIH1D3Q9NQM4 214 aaKnown RBP17.84■□□□□ 0.45
VAMP1-203ENST00000400911 MTMR10Q9NXD2 777 aa17.84■□□□□ 0.45
VAMP1-203ENST00000400911 STXBP5LQ9Y2K9 1186 aa17.84■□□□□ 0.45
VAMP1-203ENST00000400911 UNC80Q8N2C7 3258 aa17.84■□□□□ 0.45
VAMP1-203ENST00000400911 LAMA2P24043 3122 aaKnown RBP17.83■□□□□ 0.45
VAMP1-203ENST00000400911 BCAR3O75815 825 aa17.83■□□□□ 0.44
VAMP1-203ENST00000400911 GH2P01242 217 aa17.83■□□□□ 0.44
VAMP1-203ENST00000400911 HLA-DOAP06340 250 aa17.83■□□□□ 0.44
VAMP1-203ENST00000400911 MDM2Q00987 491 aaPredicted RBP17.83■□□□□ 0.44
VAMP1-203ENST00000400911 APBA2Q99767 749 aa17.83■□□□□ 0.44
VAMP1-203ENST00000400911 CWC22Q9HCG8 908 aaKnown RBP17.83■□□□□ 0.44
VAMP1-203ENST00000400911 NDUFB9Q9Y6M9 179 aa17.83■□□□□ 0.44
VAMP1-203ENST00000400911 LOC285556D6RIA3 1793 aa17.83■□□□□ 0.44
VAMP1-203ENST00000400911 CNMDO75829 334 aa17.82■□□□□ 0.44
VAMP1-203ENST00000400911 CYP7A1P22680 504 aa17.82■□□□□ 0.44
VAMP1-203ENST00000400911 OS9Q13438 667 aaPredicted RBP17.82■□□□□ 0.44
VAMP1-203ENST00000400911 ZYXQ15942 572 aaKnown RBP17.82■□□□□ 0.44
VAMP1-203ENST00000400911 EDC3Q96F86 508 aaKnown RBP17.82■□□□□ 0.44
VAMP1-203ENST00000400911 DNAH12Q6ZR08 3092 aa17.82■□□□□ 0.44
VAMP1-203ENST00000400911 USP17L15C9J2P7 530 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 USP17L13C9JLJ4 530 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 USP17L11C9JVI0 530 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 USP17L18D6R9N7 530 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 USP17L22D6RA61 530 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 USP17L17D6RBQ6 530 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 USP17L19D6RCP7 530 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 USP17L20D6RJB6 530 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 USP17L24Q0WX57 530 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 MAP2K5Q13163 448 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 POLA2Q14181 598 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 MIGA1Q8NAN2 632 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 ZNF512BQ96KM6 892 aaPredicted RBP17.81■□□□□ 0.44
VAMP1-203ENST00000400911 FLRT1Q9NZU1 646 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 RABGAP1Q9Y3P9 1069 aa17.81■□□□□ 0.44
VAMP1-203ENST00000400911 SURF6O75683 361 aaKnown RBP17.8■□□□□ 0.44
VAMP1-203ENST00000400911 CCNA1P78396 465 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms