RNA–Protein interactions for RNA: ENST00000399756.8

TRPV1-202, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-202ENST00000399756 SPAG1Q07617 926 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 RASGRP4Q8TDF6 673 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 PSMB7Q99436 277 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 GBP3Q9H0R5 595 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 RMND1Q9NWS8 449 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 CEMIPQ8WUJ3 1361 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 USO1O60763 962 aaKnown RBP11.36□□□□□ -0.59
TRPV1-202ENST00000399756 CALM1P0DP23 149 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 CALM2P0DP24 149 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 CALM3P0DP25 149 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 TFAP4Q01664 338 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 PPP1R13BQ96KQ4 1090 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRPV1-202ENST00000399756 CSRNP2Q9H175 543 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 PCDHB6Q9Y5E3 794 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 USP42Q9H9J4 1324 aaKnown RBP11.36□□□□□ -0.59
TRPV1-202ENST00000399756 GOLGA8HP0CJ92 632 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 RBM6P78332 1123 aaKnown RBP11.36□□□□□ -0.59
TRPV1-202ENST00000399756 ST3GAL1Q11201 340 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 FAM182BQ5T319 152 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 MAPKAPK5Q8IW41 473 aa11.36□□□□□ -0.59
TRPV1-202ENST00000399756 LUC7LQ9NQ29 371 aaKnown RBP11.36□□□□□ -0.59
TRPV1-202ENST00000399756 SAMSN1Q9NSI8 373 aaKnown RBP11.36□□□□□ -0.59
TRPV1-202ENST00000399756 KIF28PB7ZC32 967 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 CALML3P27482 149 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 CDC27P30260 824 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 SRRTQ9BXP5 876 aaKnown RBP11.35□□□□□ -0.59
TRPV1-202ENST00000399756 RAB34Q9BZG1 259 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 SH2B2O14492 632 aaPredicted RBP11.35□□□□□ -0.59
TRPV1-202ENST00000399756 WDHD1O75717 1129 aaPredicted RBP11.35□□□□□ -0.59
TRPV1-202ENST00000399756 CCDC122Q5T0U0 273 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 VPS18Q9P253 973 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 FOXN1O15353 648 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 PAFAH1B1P43034 410 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 TBC1D8BQ0IIM8 1120 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 PTGDRQ13258 359 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 FAM98CQ17RN3 349 aaKnown RBP11.35□□□□□ -0.59
TRPV1-202ENST00000399756 FMR1NBQ8N0W7 255 aaPredicted RBP11.35□□□□□ -0.59
TRPV1-202ENST00000399756 TSG101Q99816 390 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 CARD10Q9BWT7 1032 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 PPP2R2CQ9Y2T4 447 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 TXKP42681 527 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 NOP2P46087 812 aaKnown RBP11.35□□□□□ -0.59
TRPV1-202ENST00000399756 AMPD3Q01432 767 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 RAD51AP2Q09MP3 1159 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 PARP10Q53GL7 1025 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 DNAJC21Q5F1R6 531 aaKnown RBP11.35□□□□□ -0.59
TRPV1-202ENST00000399756 WWC2Q6AWC2 1192 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 TAF4BQ92750 862 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 SMARCC1Q92922 1105 aaPredicted RBP11.35□□□□□ -0.59
TRPV1-202ENST00000399756 EPSTI1Q96J88 318 aa11.35□□□□□ -0.59
TRPV1-202ENST00000399756 GTPBP4Q9BZE4 634 aaKnown RBP11.35□□□□□ -0.59
TRPV1-202ENST00000399756 TMEM232C9JQI7 657 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 RFX5P48382 616 aaPredicted RBP11.34□□□□□ -0.59
TRPV1-202ENST00000399756 RABL6Q3YEC7 729 aaPredicted RBP11.34□□□□□ -0.59
TRPV1-202ENST00000399756 ODF2Q5BJF6 829 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 SMIM5Q71RC9 77 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 CNGA4Q8IV77 575 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 SMARCC2Q8TAQ2 1214 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 SYMPKQ92797 1274 aaKnown RBP11.34□□□□□ -0.59
TRPV1-202ENST00000399756 CCDC42Q96M95 316 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 STRBPQ96SI9 672 aaKnown RBP11.34□□□□□ -0.59
TRPV1-202ENST00000399756 SENP2Q9HC62 589 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 GPCPD1Q9NPB8 672 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 CTDNEP1O95476 244 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 PDE4DQ08499 809 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 HLTFQ14527 1009 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRPV1-202ENST00000399756 TGFBRAP1Q8WUH2 860 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 NEDD4P46934 1319 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 MYO5BQ9ULV0 1848 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 BAZ2BQ9UIF8 2168 aaKnown RBP11.34□□□□□ -0.59
TRPV1-202ENST00000399756 CHMP4BP1P59074 171 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 NCBP1Q09161 790 aaKnown RBP11.34□□□□□ -0.59
TRPV1-202ENST00000399756 CTR9Q6PD62 1173 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 DYMQ7RTS9 669 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 ZSCAN10Q96SZ4 725 aaPredicted RBP11.34□□□□□ -0.59
TRPV1-202ENST00000399756 PLEKHA4Q9H4M7 779 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 CALCOCO1Q9P1Z2 691 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 MED23Q9ULK4 1368 aa11.34□□□□□ -0.59
TRPV1-202ENST00000399756 TMCO5BA8MYB1 307 aa11.33□□□□□ -0.6
TRPV1-202ENST00000399756 SEC31AO94979 1220 aaKnown RBP11.33□□□□□ -0.6
TRPV1-202ENST00000399756 CYLC1P35663 651 aaPredicted RBP11.33□□□□□ -0.6
TRPV1-202ENST00000399756 CRKLP46109 303 aaKnown RBP11.33□□□□□ -0.6
TRPV1-202ENST00000399756 GNAQP50148 359 aa11.33□□□□□ -0.6
TRPV1-202ENST00000399756 RNASE9P60153 205 aaKnown RBP11.33□□□□□ -0.6
TRPV1-202ENST00000399756 PAK1Q13153 545 aa11.33□□□□□ -0.6
TRPV1-202ENST00000399756 IQCEQ6IPM2 695 aa11.33□□□□□ -0.6
TRPV1-202ENST00000399756 PLA2G4DQ86XP0 818 aa11.33□□□□□ -0.6
TRPV1-202ENST00000399756 CSGALNACT2Q8N6G5 542 aa11.33□□□□□ -0.6
TRPV1-202ENST00000399756 PPP1R1BQ9UD71 204 aaPredicted RBP11.33□□□□□ -0.6
TRPV1-202ENST00000399756 UBE2Q2LH0YL09 131 aa11.33□□□□□ -0.6
TRPV1-202ENST00000399756 RPS8P62241 208 aaKnown RBP11.33□□□□□ -0.6
TRPV1-202ENST00000399756 EXOSC10Q01780 885 aaKnown RBP11.33□□□□□ -0.6
TRPV1-202ENST00000399756 SUSD4Q5VX71 490 aa11.33□□□□□ -0.6
TRPV1-202ENST00000399756 MB21D2Q8IYB1 491 aaPredicted RBP11.33□□□□□ -0.6
TRPV1-202ENST00000399756 NELFBQ8WX92 580 aa11.33□□□□□ -0.6
TRPV1-202ENST00000399756 FAM107BQ9H098 131 aa11.33□□□□□ -0.6
TRPV1-202ENST00000399756 RABEP2Q9H5N1 569 aa11.33□□□□□ -0.6
TRPV1-202ENST00000399756 RBM28Q9NW13 759 aaKnown RBP11.33□□□□□ -0.6
TRPV1-202ENST00000399756 RTCBQ9Y3I0 505 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms