RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 ASTLQ6HA08 431 aaPredicted RBP10.55□□□□□ -0.72
BRCC3-206ENST00000399042 DLK2Q6UY11 383 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 SH3BP5LQ7L8J4 393 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 C2orf69Q8N8R5 385 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 NCOA7Q8NI08 942 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 ESR2Q92731 530 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 JAKMIP1Q96N16 626 aaKnown RBP10.55□□□□□ -0.72
BRCC3-206ENST00000399042 EHD4Q9H223 541 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 PICK1Q9NRD5 415 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 BMP2KQ9NSY1 1161 aaPredicted RBP10.55□□□□□ -0.72
BRCC3-206ENST00000399042 MKRN1Q9UHC7 482 aaKnown RBP10.55□□□□□ -0.72
BRCC3-206ENST00000399042 WDR90Q96KV7 1748 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 SCN4AP35499 1836 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 ERICH2A1L162 156 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 E7EWF7 191 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 FOXP2O15409 715 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 ATMINO43313 823 aaPredicted RBP10.54□□□□□ -0.72
BRCC3-206ENST00000399042 HMGB1P09429 215 aaKnown RBP10.54□□□□□ -0.72
BRCC3-206ENST00000399042 PCP11498 1178 aaKnown RBP10.54□□□□□ -0.72
BRCC3-206ENST00000399042 ATP2B2Q01814 1243 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 SART3Q15020 963 aaKnown RBP10.54□□□□□ -0.72
BRCC3-206ENST00000399042 FAM47AQ5JRC9 791 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 C16orf86Q6ZW13 317 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 TBC1D10CQ8IV04 446 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 CDAN1Q8IWY9 1227 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 SLC44A5Q8NCS7 719 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 STAG1Q8WVM7 1258 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 NEK1Q96PY6 1258 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 WRNIP1Q96S55 665 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 UBAC1Q9BSL1 405 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 INCENPQ9NQS7 918 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 ANAPC4Q9UJX5 808 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 ANGEL1Q9UNK9 670 aaKnown RBP10.54□□□□□ -0.72
BRCC3-206ENST00000399042 CSADQ9Y600 493 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 CYP46A1Q9Y6A2 500 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 MYH7P12883 1935 aa10.54□□□□□ -0.72
BRCC3-206ENST00000399042 ATRNL1Q5VV63 1379 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 ADAMTSL1Q8N6G6 1762 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 B4E1Z4 1266 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 KIF3CO14782 793 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 RAD21O60216 631 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 TBC1D12O60347 775 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 KDM4AO75164 1064 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 GDF11O95390 407 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 CASTP20810 708 aaKnown RBP10.53□□□□□ -0.72
BRCC3-206ENST00000399042 MCM5P33992 734 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 TFAP4Q01664 338 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 RAB3GAP1Q15042 981 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 ABCB5Q2M3G0 1257 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 BLOC1S2Q6QNY1 142 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 IQCA1Q86XH1 822 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 RBM46Q8TBY0 533 aaKnown RBP10.53□□□□□ -0.72
BRCC3-206ENST00000399042 CCDC17Q96LX7 622 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 TEPSINQ96N21 525 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 TAOK2Q9UL54 1235 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 NAP1L2Q9ULW6 460 aaPredicted RBP10.53□□□□□ -0.72
BRCC3-206ENST00000399042 SNX14Q9Y5W7 946 aa10.53□□□□□ -0.72
BRCC3-206ENST00000399042 TTLL13PA6NNM8 815 aa10.52□□□□□ -0.73
BRCC3-206ENST00000399042 SMIM22K7EJ46 135 aa10.52□□□□□ -0.73
BRCC3-206ENST00000399042 ANAPC15P60006 121 aa10.52□□□□□ -0.73
BRCC3-206ENST00000399042 MAP3K9P80192 1104 aa10.52□□□□□ -0.73
BRCC3-206ENST00000399042 PDAP1Q13442 181 aaKnown RBP10.52□□□□□ -0.73
BRCC3-206ENST00000399042 PPP4R3BQ5MIZ7 849 aa10.52□□□□□ -0.73
BRCC3-206ENST00000399042 NFXL1Q6ZNB6 911 aa10.52□□□□□ -0.73
BRCC3-206ENST00000399042 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
BRCC3-206ENST00000399042 GBA2Q9HCG7 927 aaPredicted RBP10.52□□□□□ -0.73
BRCC3-206ENST00000399042 ISY1Q9ULR0 285 aaKnown RBP10.52□□□□□ -0.73
BRCC3-206ENST00000399042 FZD1Q9UP38 647 aa10.52□□□□□ -0.73
BRCC3-206ENST00000399042 NEDD4P46934 1319 aa10.52□□□□□ -0.73
BRCC3-206ENST00000399042 COL2A1P02458 1487 aaPredicted RBP10.51□□□□□ -0.73
BRCC3-206ENST00000399042 UBE2Q2LH0YL09 131 aa10.51□□□□□ -0.73
BRCC3-206ENST00000399042 IFIT3O14879 490 aaKnown RBP10.51□□□□□ -0.73
BRCC3-206ENST00000399042 ORC4O43929 436 aa10.51□□□□□ -0.73
BRCC3-206ENST00000399042 CTNND1O60716 968 aaKnown RBP10.51□□□□□ -0.73
BRCC3-206ENST00000399042 GH2P01242 217 aa10.51□□□□□ -0.73
BRCC3-206ENST00000399042 SLURP2P0DP57 97 aa10.51□□□□□ -0.73
BRCC3-206ENST00000399042 SHMT1P34896 483 aa10.51□□□□□ -0.73
BRCC3-206ENST00000399042 PSEN1P49768 467 aa10.51□□□□□ -0.73
BRCC3-206ENST00000399042 FMR1Q06787 632 aaKnown RBP eCLIP10.51□□□□□ -0.73
BRCC3-206ENST00000399042 FSTL1Q12841 308 aa10.51□□□□□ -0.73
BRCC3-206ENST00000399042 CCDC178Q5BJE1 867 aa10.51□□□□□ -0.73
BRCC3-206ENST00000399042 CHST3Q7LGC8 479 aa10.51□□□□□ -0.73
BRCC3-206ENST00000399042 SLC10A4Q96EP9 437 aa10.51□□□□□ -0.73
BRCC3-206ENST00000399042 ZKSCAN3Q9BRR0 538 aa10.51□□□□□ -0.73
BRCC3-206ENST00000399042 UPF3BQ9BZI7 483 aaKnown RBP10.51□□□□□ -0.73
BRCC3-206ENST00000399042 PDRG1Q9NUG6 133 aa10.51□□□□□ -0.73
BRCC3-206ENST00000399042 ABT1Q9ULW3 272 aaKnown RBP10.51□□□□□ -0.73
BRCC3-206ENST00000399042 ZNF646O15015 1829 aaPredicted RBP10.51□□□□□ -0.73
BRCC3-206ENST00000399042 PRC1O43663 620 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 ST18O60284 1047 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 USP2O75604 605 aaPredicted RBP10.5□□□□□ -0.73
BRCC3-206ENST00000399042 ASNSP08243 561 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 AKR1B1P15121 316 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 RASA1P20936 1047 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 CAP2P40123 477 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 NT5C2P49902 561 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 NEK4P51957 841 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 ATN1P54259 1190 aaPredicted RBP10.5□□□□□ -0.73
BRCC3-206ENST00000399042 FKBP1BP68106 108 aa10.5□□□□□ -0.73
BRCC3-206ENST00000399042 GABPAQ06546 454 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms