RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ERO1BQ86YB8 467 aa30.24■■■□□ 2.43
TMEM55B-202ENST00000398020 PTPRAP18433 802 aa30.23■■■□□ 2.43
TMEM55B-202ENST00000398020 ESYT1Q9BSJ8 1104 aa30.23■■■□□ 2.43
TMEM55B-202ENST00000398020 SWAP70Q9UH65 585 aa30.23■■■□□ 2.43
TMEM55B-202ENST00000398020 MYH8P13535 1937 aa30.23■■■□□ 2.43
TMEM55B-202ENST00000398020 KIF23Q02241 960 aaPredicted RBP30.23■■■□□ 2.43
TMEM55B-202ENST00000398020 CTDSPL2Q05D32 466 aa30.23■■■□□ 2.43
TMEM55B-202ENST00000398020 ROBO3Q96MS0 1386 aa30.22■■■□□ 2.43
TMEM55B-202ENST00000398020 ZBTB48P10074 688 aaPredicted RBP30.22■■■□□ 2.43
TMEM55B-202ENST00000398020 DSCC1Q9BVC3 393 aa30.22■■■□□ 2.43
TMEM55B-202ENST00000398020 ZHX2Q9Y6X8 837 aa30.22■■■□□ 2.43
TMEM55B-202ENST00000398020 GH2P01242 217 aa30.21■■■□□ 2.43
TMEM55B-202ENST00000398020 HAND2P61296 217 aa30.21■■■□□ 2.43
TMEM55B-202ENST00000398020 PTH1RQ03431 593 aa30.21■■■□□ 2.43
TMEM55B-202ENST00000398020 ZBTB21Q9ULJ3 1066 aa30.21■■■□□ 2.43
TMEM55B-202ENST00000398020 IRF6O14896 467 aa30.2■■■□□ 2.43
TMEM55B-202ENST00000398020 PRDM1O75626 825 aa30.2■■■□□ 2.43
TMEM55B-202ENST00000398020 PPATQ06203 517 aa30.2■■■□□ 2.43
TMEM55B-202ENST00000398020 ABCB5Q2M3G0 1257 aa30.2■■■□□ 2.43
TMEM55B-202ENST00000398020 CASC1Q6TDU7 716 aa30.2■■■□□ 2.43
TMEM55B-202ENST00000398020 ZMYM6O95789 1325 aa30.2■■■□□ 2.43
TMEM55B-202ENST00000398020 MPHOSPH10O00566 681 aaKnown RBP30.2■■■□□ 2.42
TMEM55B-202ENST00000398020 THSD7BQ9C0I4 1608 aa30.19■■■□□ 2.42
TMEM55B-202ENST00000398020 ASNSP08243 561 aa30.19■■■□□ 2.42
TMEM55B-202ENST00000398020 MAP2K2P36507 400 aa30.19■■■□□ 2.42
TMEM55B-202ENST00000398020 MKNK2Q9HBH9 465 aa30.19■■■□□ 2.42
TMEM55B-202ENST00000398020 INCENPQ9NQS7 918 aa30.19■■■□□ 2.42
TMEM55B-202ENST00000398020 AKR1B1P15121 316 aa30.18■■■□□ 2.42
TMEM55B-202ENST00000398020 PPIL2Q13356 520 aa30.18■■■□□ 2.42
TMEM55B-202ENST00000398020 PHIPQ8WWQ0 1821 aa30.17■■■□□ 2.42
TMEM55B-202ENST00000398020 RAB3GAP1Q15042 981 aa30.17■■■□□ 2.42
TMEM55B-202ENST00000398020 TAOK2Q9UL54 1235 aa30.17■■■□□ 2.42
TMEM55B-202ENST00000398020 TACC3Q9Y6A5 838 aa30.17■■■□□ 2.42
TMEM55B-202ENST00000398020 SLC3A2P08195 630 aaKnown RBP30.17■■■□□ 2.42
TMEM55B-202ENST00000398020 ANAPC4Q9UJX5 808 aa30.17■■■□□ 2.42
TMEM55B-202ENST00000398020 TRIM75PA6NK02 468 aa30.16■■■□□ 2.42
TMEM55B-202ENST00000398020 USP17L5A8MUK1 530 aa30.16■■■□□ 2.42
TMEM55B-202ENST00000398020 RASA1P20936 1047 aa30.16■■■□□ 2.42
TMEM55B-202ENST00000398020 NBPF3Q9H094 633 aa30.16■■■□□ 2.42
TMEM55B-202ENST00000398020 CABP5Q9NP86 173 aa30.16■■■□□ 2.42
TMEM55B-202ENST00000398020 AFG3L2Q9Y4W6 797 aa30.16■■■□□ 2.42
TMEM55B-202ENST00000398020 PDE4BQ07343 736 aa30.15■■■□□ 2.42
TMEM55B-202ENST00000398020 KIAA1211Q6ZU35 1233 aa30.15■■■□□ 2.42
TMEM55B-202ENST00000398020 ANO2Q9NQ90 1003 aa30.15■■■□□ 2.42
TMEM55B-202ENST00000398020 ZNF213O14771 459 aa30.14■■■□□ 2.42
TMEM55B-202ENST00000398020 GUCY1A2P33402 732 aa30.14■■■□□ 2.42
TMEM55B-202ENST00000398020 SEPT2Q15019 361 aa30.14■■■□□ 2.42
TMEM55B-202ENST00000398020 MS4A4AQ96JQ5 239 aa30.14■■■□□ 2.42
TMEM55B-202ENST00000398020 JMYQ8N9B5 988 aa30.14■■■□□ 2.41
TMEM55B-202ENST00000398020 LSG1Q9H089 658 aaKnown RBP30.14■■■□□ 2.41
TMEM55B-202ENST00000398020 ZNF287Q9HBT7 754 aa30.14■■■□□ 2.41
TMEM55B-202ENST00000398020 CTNNA3Q9UI47 895 aa30.14■■■□□ 2.41
TMEM55B-202ENST00000398020 LAMA4Q16363 1823 aa30.13■■■□□ 2.41
TMEM55B-202ENST00000398020 MANSC4A6NHS7 340 aaPredicted RBP30.13■■■□□ 2.41
TMEM55B-202ENST00000398020 GTF2A2P52657 109 aa30.13■■■□□ 2.41
TMEM55B-202ENST00000398020 SPP2Q13103 211 aa30.13■■■□□ 2.41
TMEM55B-202ENST00000398020 CLEC10AQ8IUN9 316 aa30.13■■■□□ 2.41
TMEM55B-202ENST00000398020 TBC1D10CQ8IV04 446 aa30.13■■■□□ 2.41
TMEM55B-202ENST00000398020 CCDC17Q96LX7 622 aa30.13■■■□□ 2.41
TMEM55B-202ENST00000398020 GINM1Q9NU53 330 aa30.13■■■□□ 2.41
TMEM55B-202ENST00000398020 SNAPC2Q13487 334 aa30.12■■■□□ 2.41
TMEM55B-202ENST00000398020 ZNF444Q8N0Y2 327 aaPredicted RBP30.12■■■□□ 2.41
TMEM55B-202ENST00000398020 ZNF280CQ8ND82 737 aa30.12■■■□□ 2.41
TMEM55B-202ENST00000398020 KCNH4Q9UQ05 1017 aa30.12■■■□□ 2.41
TMEM55B-202ENST00000398020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.12■■■□□ 2.41
TMEM55B-202ENST00000398020 CCL15-CCL14A0A0B4J2E2 113 aa30.11■■■□□ 2.41
TMEM55B-202ENST00000398020 CCL15Q16663 113 aa30.11■■■□□ 2.41
TMEM55B-202ENST00000398020 IMMTQ16891 758 aaKnown RBP30.11■■■□□ 2.41
TMEM55B-202ENST00000398020 TMEM179Q6ZVK1 233 aa30.11■■■□□ 2.41
TMEM55B-202ENST00000398020 MAP4K1Q92918 833 aa30.11■■■□□ 2.41
TMEM55B-202ENST00000398020 AS3MTQ9HBK9 375 aa30.11■■■□□ 2.41
TMEM55B-202ENST00000398020 TOMM22Q9NS69 142 aa30.11■■■□□ 2.41
TMEM55B-202ENST00000398020 SREBF2Q12772 1141 aa30.11■■■□□ 2.41
TMEM55B-202ENST00000398020 FAM47AQ5JRC9 791 aa30.11■■■□□ 2.41
TMEM55B-202ENST00000398020 BRI3BPQ8WY22 251 aa30.11■■■□□ 2.41
TMEM55B-202ENST00000398020 U3KPZ7 1027 aaPredicted RBP30.11■■■□□ 2.41
TMEM55B-202ENST00000398020 DGKZQ13574 1117 aa30.1■■■□□ 2.41
TMEM55B-202ENST00000398020 RRP12Q5JTH9 1297 aaKnown RBP30.1■■■□□ 2.41
TMEM55B-202ENST00000398020 RBM8AQ9Y5S9 174 aaKnown RBP30.1■■■□□ 2.41
TMEM55B-202ENST00000398020 CXCL11O14625 94 aa30.09■■■□□ 2.41
TMEM55B-202ENST00000398020 AKNAD1Q5T1N1 836 aa30.09■■■□□ 2.41
TMEM55B-202ENST00000398020 PTPN18Q99952 460 aa30.09■■■□□ 2.41
TMEM55B-202ENST00000398020 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.09■■■□□ 2.41
TMEM55B-202ENST00000398020 PTPRFP10586 1907 aa30.08■■■□□ 2.41
TMEM55B-202ENST00000398020 CETPP11597 493 aa30.08■■■□□ 2.41
TMEM55B-202ENST00000398020 TM4SF4P48230 202 aa30.08■■■□□ 2.41
TMEM55B-202ENST00000398020 MAP2K1Q02750 393 aaPredicted RBP30.08■■■□□ 2.41
TMEM55B-202ENST00000398020 MTMR2Q13614 643 aa30.08■■■□□ 2.41
TMEM55B-202ENST00000398020 WDR18Q9BV38 432 aa30.08■■■□□ 2.41
TMEM55B-202ENST00000398020 IGF2BP3O00425 579 aaKnown RBP eCLIP30.07■■■□□ 2.41
TMEM55B-202ENST00000398020 CYP21A2P08686 494 aa30.07■■■□□ 2.41
TMEM55B-202ENST00000398020 TFAP4Q01664 338 aa30.07■■■□□ 2.41
TMEM55B-202ENST00000398020 MFSD6Q6ZSS7 791 aa30.07■■■□□ 2.41
TMEM55B-202ENST00000398020 ACER1Q8TDN7 264 aa30.07■■■□□ 2.41
TMEM55B-202ENST00000398020 STAG1Q8WVM7 1258 aa30.07■■■□□ 2.41
TMEM55B-202ENST00000398020 NEDD4P46934 1319 aa30.07■■■□□ 2.4
TMEM55B-202ENST00000398020 A0A0G2JLL6 359 aaPredicted RBP30.07■■■□□ 2.4
TMEM55B-202ENST00000398020 RANBP6O60518 1105 aaKnown RBP30.07■■■□□ 2.4
TMEM55B-202ENST00000398020 FGRP09769 529 aa30.07■■■□□ 2.4
TMEM55B-202ENST00000398020 TSPY3P0CV98 308 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms