RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 ASCC2Q9H1I8 757 aaPredicted RBP17.41■□□□□ 0.38
SNRNP25-203ENST00000397876 TAOK2Q9UL54 1235 aa17.41■□□□□ 0.38
SNRNP25-203ENST00000397876 GDF11O95390 407 aa17.4■□□□□ 0.38
SNRNP25-203ENST00000397876 INHAP05111 366 aa17.4■□□□□ 0.38
SNRNP25-203ENST00000397876 USP5P45974 858 aa17.4■□□□□ 0.38
SNRNP25-203ENST00000397876 IRX3P78415 501 aaPredicted RBP17.4■□□□□ 0.38
SNRNP25-203ENST00000397876 MAGEB6Q8N7X4 407 aa17.4■□□□□ 0.38
SNRNP25-203ENST00000397876 U2AF1L4Q8WU68 220 aaKnown RBP17.4■□□□□ 0.38
SNRNP25-203ENST00000397876 UNC93B1Q9H1C4 597 aa17.4■□□□□ 0.38
SNRNP25-203ENST00000397876 ZBTB21Q9ULJ3 1066 aa17.4■□□□□ 0.38
SNRNP25-203ENST00000397876 C19orf81C9J6K1 198 aa17.39■□□□□ 0.37
SNRNP25-203ENST00000397876 NDUFB9Q9Y6M9 179 aa17.39■□□□□ 0.37
SNRNP25-203ENST00000397876 USP17L10C9JJH3 530 aa17.38■□□□□ 0.37
SNRNP25-203ENST00000397876 JAG1P78504 1218 aa17.38■□□□□ 0.37
SNRNP25-203ENST00000397876 RHPN1Q8TCX5 695 aa17.38■□□□□ 0.37
SNRNP25-203ENST00000397876 HTATIP2Q9BUP3 242 aa17.38■□□□□ 0.37
SNRNP25-203ENST00000397876 ANTXR1Q9H6X2 564 aa17.38■□□□□ 0.37
SNRNP25-203ENST00000397876 IL1RAPL2Q9NP60 686 aa17.38■□□□□ 0.37
SNRNP25-203ENST00000397876 MYH1P12882 1939 aa17.38■□□□□ 0.37
SNRNP25-203ENST00000397876 CEP290O15078 2479 aa17.37■□□□□ 0.37
SNRNP25-203ENST00000397876 H0YGN5 161 aa17.37■□□□□ 0.37
SNRNP25-203ENST00000397876 HMMRO75330 724 aa17.37■□□□□ 0.37
SNRNP25-203ENST00000397876 FARP2O94887 1054 aaPredicted RBP17.37■□□□□ 0.37
SNRNP25-203ENST00000397876 SGPL1O95470 568 aa17.37■□□□□ 0.37
SNRNP25-203ENST00000397876 CAPN2P17655 700 aa17.37■□□□□ 0.37
SNRNP25-203ENST00000397876 HOXA7P31268 230 aaPredicted RBP17.37■□□□□ 0.37
SNRNP25-203ENST00000397876 TTF1Q15361 905 aaPredicted RBP17.37■□□□□ 0.37
SNRNP25-203ENST00000397876 SHROOM1Q2M3G4 852 aaPredicted RBP17.37■□□□□ 0.37
SNRNP25-203ENST00000397876 DPF3Q92784 378 aa17.37■□□□□ 0.37
SNRNP25-203ENST00000397876 EHD4Q9H223 541 aa17.37■□□□□ 0.37
SNRNP25-203ENST00000397876 MORF4L1Q9UBU8 362 aa17.37■□□□□ 0.37
SNRNP25-203ENST00000397876 UBE2Q1Q7Z7E8 422 aa17.36■□□□□ 0.37
SNRNP25-203ENST00000397876 TTC6Q86TZ1 520 aa17.36■□□□□ 0.37
SNRNP25-203ENST00000397876 CLASRPQ8N2M8 674 aaKnown RBP17.36■□□□□ 0.37
SNRNP25-203ENST00000397876 SERPINB13Q9UIV8 391 aa17.36■□□□□ 0.37
SNRNP25-203ENST00000397876 DDX19BQ9UMR2 479 aa17.36■□□□□ 0.37
SNRNP25-203ENST00000397876 APBB1O00213 710 aa17.35■□□□□ 0.37
SNRNP25-203ENST00000397876 GH2P01242 217 aa17.35■□□□□ 0.37
SNRNP25-203ENST00000397876 HMGCRP04035 888 aa17.35■□□□□ 0.37
SNRNP25-203ENST00000397876 HERVK_113P62684 666 aa17.35■□□□□ 0.37
SNRNP25-203ENST00000397876 RPAP2Q8IXW5 612 aaPredicted RBP17.35■□□□□ 0.37
SNRNP25-203ENST00000397876 GTF3C2Q8WUA4 911 aaPredicted RBP17.35■□□□□ 0.37
SNRNP25-203ENST00000397876 KIF1BPQ96EK5 621 aa17.35■□□□□ 0.37
SNRNP25-203ENST00000397876 DEFB118Q96PH6 123 aa17.35■□□□□ 0.37
SNRNP25-203ENST00000397876 FEZ1Q99689 392 aa17.35■□□□□ 0.37
SNRNP25-203ENST00000397876 PAK6Q9NQU5 681 aaPredicted RBP17.35■□□□□ 0.37
SNRNP25-203ENST00000397876 COLQQ9Y215 455 aaPredicted RBP17.35■□□□□ 0.37
SNRNP25-203ENST00000397876 DOCK3Q8IZD9 2030 aa17.35■□□□□ 0.37
SNRNP25-203ENST00000397876 TFRCP02786 760 aaKnown RBP17.34■□□□□ 0.37
SNRNP25-203ENST00000397876 IFIT2P09913 472 aaKnown RBP17.34■□□□□ 0.37
SNRNP25-203ENST00000397876 DDX60LQ5H9U9 1706 aaKnown RBP17.34■□□□□ 0.37
SNRNP25-203ENST00000397876 TATDN1Q6P1N9 297 aa17.34■□□□□ 0.37
SNRNP25-203ENST00000397876 USP17L2Q6R6M4 530 aa17.34■□□□□ 0.37
SNRNP25-203ENST00000397876 NAV1Q8NEY1 1877 aa17.34■□□□□ 0.37
SNRNP25-203ENST00000397876 GPRC5AQ8NFJ5 357 aa17.34■□□□□ 0.37
SNRNP25-203ENST00000397876 P2RX7Q99572 595 aaKnown RBP17.34■□□□□ 0.37
SNRNP25-203ENST00000397876 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNRNP25-203ENST00000397876 CHMP4BQ9H444 224 aaKnown RBP17.34■□□□□ 0.37
SNRNP25-203ENST00000397876 MAGEB6P1A0A0J9YX57 407 aa17.33■□□□□ 0.36
SNRNP25-203ENST00000397876 SLC9C2Q5TAH2 1124 aa17.33■□□□□ 0.36
SNRNP25-203ENST00000397876 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.33■□□□□ 0.36
SNRNP25-203ENST00000397876 SOCS4Q8WXH5 440 aa17.33■□□□□ 0.36
SNRNP25-203ENST00000397876 RIOK1Q9BRS2 568 aaKnown RBP17.33■□□□□ 0.36
SNRNP25-203ENST00000397876 COG6Q9Y2V7 657 aa17.33■□□□□ 0.36
SNRNP25-203ENST00000397876 NR2E3Q9Y5X4 410 aa17.33■□□□□ 0.36
SNRNP25-203ENST00000397876 PDE6AP16499 860 aa17.32■□□□□ 0.36
SNRNP25-203ENST00000397876 RAB3GAP1Q15042 981 aa17.32■□□□□ 0.36
SNRNP25-203ENST00000397876 CERKLQ49MI3 558 aaPredicted RBP17.32■□□□□ 0.36
SNRNP25-203ENST00000397876 CCAR1Q8IX12 1150 aaKnown RBP17.32■□□□□ 0.36
SNRNP25-203ENST00000397876 C12orf42Q96LP6 360 aa17.32■□□□□ 0.36
SNRNP25-203ENST00000397876 DNAJC2Q99543 621 aaKnown RBP17.32■□□□□ 0.36
SNRNP25-203ENST00000397876 CRNKL1Q9BZJ0 848 aaKnown RBP17.32■□□□□ 0.36
SNRNP25-203ENST00000397876 TXNRD2Q9NNW7 524 aa17.32■□□□□ 0.36
SNRNP25-203ENST00000397876 CABP5Q9NP86 173 aa17.32■□□□□ 0.36
SNRNP25-203ENST00000397876 EMILIN3Q9NT22 766 aa17.32■□□□□ 0.36
SNRNP25-203ENST00000397876 ZBTB40Q9NUA8 1239 aa17.32■□□□□ 0.36
SNRNP25-203ENST00000397876 GJD2Q9UKL4 321 aa17.32■□□□□ 0.36
SNRNP25-203ENST00000397876 GOLIM4O00461 696 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 RAB11FIP3O75154 756 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 POLR3DP05423 398 aaPredicted RBP17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 MAPK4P31152 587 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 USP14P54578 494 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 ERVK-9P63128 1117 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 ERVK-24P63145 666 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 PDE3AQ14432 1141 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 ZYXQ15942 572 aaKnown RBP17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 ABCB5Q2M3G0 1257 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 CHRDL2Q6WN34 429 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 NUDT12Q9BQG2 462 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 PAGR1Q9BTK6 254 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 CRISPLD2Q9H0B8 497 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 PLXNB2O15031 1838 aa17.31■□□□□ 0.36
SNRNP25-203ENST00000397876 RPTORQ8N122 1335 aa17.3■□□□□ 0.36
SNRNP25-203ENST00000397876 ZNF532Q9HCE3 1301 aa17.3■□□□□ 0.36
SNRNP25-203ENST00000397876 PEX10O60683 326 aa17.3■□□□□ 0.36
SNRNP25-203ENST00000397876 FXR1P51114 621 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNRNP25-203ENST00000397876 SIRT2Q8IXJ6 389 aa17.3■□□□□ 0.36
SNRNP25-203ENST00000397876 CWC22Q9HCG8 908 aaKnown RBP17.3■□□□□ 0.36
SNRNP25-203ENST00000397876 HMX1Q9NP08 348 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms