RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SPATA5Q8NB90 893 aa18.48■□□□□ 0.55
SEC13-206ENST00000397102 GTF3C2Q8WUA4 911 aaPredicted RBP18.48■□□□□ 0.55
SEC13-206ENST00000397102 GUCD1Q96NT3 240 aa18.48■□□□□ 0.55
SEC13-206ENST00000397102 DHX36Q9H2U1 1008 aaKnown RBP18.48■□□□□ 0.55
SEC13-206ENST00000397102 RBPJLQ9UBG7 517 aa18.48■□□□□ 0.55
SEC13-206ENST00000397102 FOCADQ5VW36 1801 aa18.48■□□□□ 0.55
SEC13-206ENST00000397102 ERVK-9P63128 1117 aa18.47■□□□□ 0.55
SEC13-206ENST00000397102 ERVK-24P63145 666 aa18.47■□□□□ 0.55
SEC13-206ENST00000397102 CCL14Q16627 93 aa18.47■□□□□ 0.55
SEC13-206ENST00000397102 MORN1Q5T089 497 aa18.47■□□□□ 0.55
SEC13-206ENST00000397102 PI16Q6UXB8 463 aa18.47■□□□□ 0.55
SEC13-206ENST00000397102 TBC1D9Q6ZT07 1266 aa18.47■□□□□ 0.55
SEC13-206ENST00000397102 GPR142Q7Z601 462 aa18.47■□□□□ 0.55
SEC13-206ENST00000397102 CCAR1Q8IX12 1150 aaKnown RBP18.47■□□□□ 0.55
SEC13-206ENST00000397102 APBA2Q99767 749 aa18.47■□□□□ 0.55
SEC13-206ENST00000397102 GINM1Q9NU53 330 aa18.47■□□□□ 0.55
SEC13-206ENST00000397102 RAI14Q9P0K7 980 aa18.47■□□□□ 0.55
SEC13-206ENST00000397102 USP17L10C9JJH3 530 aa18.46■□□□□ 0.55
SEC13-206ENST00000397102 Q3C1V9 767 aa18.46■□□□□ 0.55
SEC13-206ENST00000397102 PLEKHH3Q7Z736 793 aa18.46■□□□□ 0.55
SEC13-206ENST00000397102 SH3RF3Q8TEJ3 882 aaPredicted RBP18.46■□□□□ 0.55
SEC13-206ENST00000397102 NEUROD6Q96NK8 337 aa18.46■□□□□ 0.55
SEC13-206ENST00000397102 PORCNQ9H237 461 aa18.46■□□□□ 0.55
SEC13-206ENST00000397102 LTBP2Q14767 1821 aa18.45■□□□□ 0.54
SEC13-206ENST00000397102 ARID4AP29374 1257 aaPredicted RBP18.45■□□□□ 0.54
SEC13-206ENST00000397102 JAG1P78504 1218 aa18.45■□□□□ 0.54
SEC13-206ENST00000397102 SLFN5Q08AF3 891 aa18.45■□□□□ 0.54
SEC13-206ENST00000397102 METTL16Q86W50 562 aaKnown RBP18.45■□□□□ 0.54
SEC13-206ENST00000397102 MEIS3Q99687 375 aa18.45■□□□□ 0.54
SEC13-206ENST00000397102 LBHD1Q9BQE6 289 aaPredicted RBP18.45■□□□□ 0.54
SEC13-206ENST00000397102 NOL10Q9BSC4 688 aaKnown RBP18.45■□□□□ 0.54
SEC13-206ENST00000397102 DNAJC18Q9H819 358 aa18.45■□□□□ 0.54
SEC13-206ENST00000397102 UNC80Q8N2C7 3258 aa18.45■□□□□ 0.54
SEC13-206ENST00000397102 GORABQ5T7V8 394 aa18.44■□□□□ 0.54
SEC13-206ENST00000397102 FOXP4Q8IVH2 680 aaPredicted RBP18.44■□□□□ 0.54
SEC13-206ENST00000397102 PAGR1Q9BTK6 254 aa18.44■□□□□ 0.54
SEC13-206ENST00000397102 API5Q9BZZ5 524 aaKnown RBP18.44■□□□□ 0.54
SEC13-206ENST00000397102 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.44■□□□□ 0.54
SEC13-206ENST00000397102 SRGAP3O43295 1099 aa18.43■□□□□ 0.54
SEC13-206ENST00000397102 BAG3O95817 575 aa18.43■□□□□ 0.54
SEC13-206ENST00000397102 PLCG2P16885 1265 aa18.43■□□□□ 0.54
SEC13-206ENST00000397102 MAP2K5Q13163 448 aa18.43■□□□□ 0.54
SEC13-206ENST00000397102 MTX1Q13505 466 aa18.43■□□□□ 0.54
SEC13-206ENST00000397102 SENP6Q9GZR1 1112 aaPredicted RBP18.43■□□□□ 0.54
SEC13-206ENST00000397102 LRP2BPQ9P2M1 347 aa18.43■□□□□ 0.54
SEC13-206ENST00000397102 ZBTB21Q9ULJ3 1066 aa18.43■□□□□ 0.54
SEC13-206ENST00000397102 NOB1Q9ULX3 412 aaKnown RBP18.43■□□□□ 0.54
SEC13-206ENST00000397102 GDF11O95390 407 aa18.42■□□□□ 0.54
SEC13-206ENST00000397102 MCAMP43121 646 aa18.42■□□□□ 0.54
SEC13-206ENST00000397102 ZNF697Q5TEC3 545 aa18.42■□□□□ 0.54
SEC13-206ENST00000397102 POTEEQ6S8J3 1075 aa18.42■□□□□ 0.54
SEC13-206ENST00000397102 CRACR2BQ8N4Y2 399 aaPredicted RBP18.42■□□□□ 0.54
SEC13-206ENST00000397102 EDC3Q96F86 508 aaKnown RBP18.42■□□□□ 0.54
SEC13-206ENST00000397102 FAM161BQ96MY7 647 aa18.42■□□□□ 0.54
SEC13-206ENST00000397102 TRIM34Q9BYJ4 488 aa18.42■□□□□ 0.54
SEC13-206ENST00000397102 CWC22Q9HCG8 908 aaKnown RBP18.42■□□□□ 0.54
SEC13-206ENST00000397102 AATFQ9NY61 560 aaKnown RBP eCLIP18.42■□□□□ 0.54
SEC13-206ENST00000397102 FLT1P17948 1338 aa18.42■□□□□ 0.54
SEC13-206ENST00000397102 MSCO60682 206 aa18.41■□□□□ 0.54
SEC13-206ENST00000397102 GLRX3O76003 335 aaKnown RBP18.41■□□□□ 0.54
SEC13-206ENST00000397102 UQCRFS1P1P0C7P4 283 aa18.41■□□□□ 0.54
SEC13-206ENST00000397102 SHROOM1Q2M3G4 852 aaPredicted RBP18.41■□□□□ 0.54
SEC13-206ENST00000397102 MFSD14CQ5VZR4 134 aa18.41■□□□□ 0.54
SEC13-206ENST00000397102 NAA16Q6N069 864 aaPredicted RBP18.41■□□□□ 0.54
SEC13-206ENST00000397102 USP17L2Q6R6M4 530 aa18.41■□□□□ 0.54
SEC13-206ENST00000397102 MAPKAPK5Q8IW41 473 aa18.41■□□□□ 0.54
SEC13-206ENST00000397102 TGFBRAP1Q8WUH2 860 aa18.41■□□□□ 0.54
SEC13-206ENST00000397102 EMILIN3Q9NT22 766 aa18.41■□□□□ 0.54
SEC13-206ENST00000397102 RABGAP1Q9Y3P9 1069 aa18.41■□□□□ 0.54
SEC13-206ENST00000397102 GNAI3P08754 354 aa18.4■□□□□ 0.54
SEC13-206ENST00000397102 PPP4CP60510 307 aa18.4■□□□□ 0.54
SEC13-206ENST00000397102 CCNA1P78396 465 aa18.4■□□□□ 0.54
SEC13-206ENST00000397102 LPAR1Q92633 364 aa18.4■□□□□ 0.54
SEC13-206ENST00000397102 C12orf42Q96LP6 360 aa18.4■□□□□ 0.54
SEC13-206ENST00000397102 FLRT1Q9NZU1 646 aa18.4■□□□□ 0.54
SEC13-206ENST00000397102 PRKAG2Q9UGJ0 569 aa18.4■□□□□ 0.54
SEC13-206ENST00000397102 DDX20Q9UHI6 824 aaKnown RBP18.4■□□□□ 0.54
SEC13-206ENST00000397102 RLFQ13129 1914 aa18.4■□□□□ 0.54
SEC13-206ENST00000397102 SLC15A5A6NIM6 579 aa18.39■□□□□ 0.53
SEC13-206ENST00000397102 DNM1LO00429 736 aa18.39■□□□□ 0.53
SEC13-206ENST00000397102 CNMDO75829 334 aa18.39■□□□□ 0.53
SEC13-206ENST00000397102 PALD1Q9ULE6 856 aa18.39■□□□□ 0.53
SEC13-206ENST00000397102 MYO5AQ9Y4I1 1855 aaKnown RBP18.39■□□□□ 0.53
SEC13-206ENST00000397102 MYH1P12882 1939 aa18.39■□□□□ 0.53
SEC13-206ENST00000397102 HLA-DOAP06340 250 aa18.38■□□□□ 0.53
SEC13-206ENST00000397102 CT47B1P0C2W7 299 aaPredicted RBP18.38■□□□□ 0.53
SEC13-206ENST00000397102 PTPREP23469 700 aa18.38■□□□□ 0.53
SEC13-206ENST00000397102 ATN1P54259 1190 aaPredicted RBP18.38■□□□□ 0.53
SEC13-206ENST00000397102 RTP1P59025 263 aa18.38■□□□□ 0.53
SEC13-206ENST00000397102 ATF7IPQ6VMQ6 1270 aa18.38■□□□□ 0.53
SEC13-206ENST00000397102 USP17L15C9J2P7 530 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 USP17L13C9JLJ4 530 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 USP17L11C9JVI0 530 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 USP17L18D6R9N7 530 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 USP17L22D6RA61 530 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 USP17L17D6RBQ6 530 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 USP17L19D6RCP7 530 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 USP17L20D6RJB6 530 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 HOXC6P09630 235 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 CNGA1P29973 690 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms