RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 TBC1D2Q9BYX2 928 aa16.26■□□□□ 0.19
GAPDH-204ENST00000396859 ROBO3Q96MS0 1386 aa16.26■□□□□ 0.19
GAPDH-204ENST00000396859 FAM155AB1AL88 458 aaPredicted RBP16.25■□□□□ 0.19
GAPDH-204ENST00000396859 FOXP2O15409 715 aa16.25■□□□□ 0.19
GAPDH-204ENST00000396859 GDF11O95390 407 aa16.25■□□□□ 0.19
GAPDH-204ENST00000396859 SHMT1P34896 483 aa16.25■□□□□ 0.19
GAPDH-204ENST00000396859 MKRN3Q13064 507 aaKnown RBP16.25■□□□□ 0.19
GAPDH-204ENST00000396859 PPIL2Q13356 520 aa16.25■□□□□ 0.19
GAPDH-204ENST00000396859 IMMTQ16891 758 aaKnown RBP16.25■□□□□ 0.19
GAPDH-204ENST00000396859 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
GAPDH-204ENST00000396859 STK11IPQ8N1F8 1099 aa16.25■□□□□ 0.19
GAPDH-204ENST00000396859 DNAJC5GQ8N7S2 189 aa16.25■□□□□ 0.19
GAPDH-204ENST00000396859 AS3MTQ9HBK9 375 aa16.25■□□□□ 0.19
GAPDH-204ENST00000396859 MYH8P13535 1937 aa16.25■□□□□ 0.19
GAPDH-204ENST00000396859 ATAD5Q96QE3 1844 aa16.24■□□□□ 0.19
GAPDH-204ENST00000396859 MANSC4A6NHS7 340 aaPredicted RBP16.24■□□□□ 0.19
GAPDH-204ENST00000396859 USP17L5A8MUK1 530 aa16.24■□□□□ 0.19
GAPDH-204ENST00000396859 ZNF213O14771 459 aa16.24■□□□□ 0.19
GAPDH-204ENST00000396859 AOC2O75106 756 aa16.24■□□□□ 0.19
GAPDH-204ENST00000396859 PTPRAP18433 802 aa16.24■□□□□ 0.19
GAPDH-204ENST00000396859 EVX2Q03828 476 aa16.24■□□□□ 0.19
GAPDH-204ENST00000396859 SREBF2Q12772 1141 aa16.24■□□□□ 0.19
GAPDH-204ENST00000396859 ZNF444Q8N0Y2 327 aaPredicted RBP16.24■□□□□ 0.19
GAPDH-204ENST00000396859 SLC44A5Q8NCS7 719 aa16.24■□□□□ 0.19
GAPDH-204ENST00000396859 ANAPC4Q9UJX5 808 aa16.24■□□□□ 0.19
GAPDH-204ENST00000396859 ZBTB21Q9ULJ3 1066 aa16.24■□□□□ 0.19
GAPDH-204ENST00000396859 ZHX2Q9Y6X8 837 aa16.24■□□□□ 0.19
GAPDH-204ENST00000396859 U3KPZ7 1027 aaPredicted RBP16.24■□□□□ 0.19
GAPDH-204ENST00000396859 GH2P01242 217 aa16.23■□□□□ 0.19
GAPDH-204ENST00000396859 GTF2A2P52657 109 aa16.23■□□□□ 0.19
GAPDH-204ENST00000396859 INHBEP58166 350 aa16.23■□□□□ 0.19
GAPDH-204ENST00000396859 KIF23Q02241 960 aaPredicted RBP16.23■□□□□ 0.19
GAPDH-204ENST00000396859 CTDSPL2Q05D32 466 aa16.23■□□□□ 0.19
GAPDH-204ENST00000396859 SNAPC2Q13487 334 aa16.23■□□□□ 0.19
GAPDH-204ENST00000396859 IL25Q9H293 177 aa16.23■□□□□ 0.19
GAPDH-204ENST00000396859 RNF41Q9H4P4 317 aaPredicted RBP16.23■□□□□ 0.19
GAPDH-204ENST00000396859 ANO2Q9NQ90 1003 aa16.23■□□□□ 0.19
GAPDH-204ENST00000396859 TOMM22Q9NS69 142 aa16.23■□□□□ 0.19
GAPDH-204ENST00000396859 PCP11498 1178 aaKnown RBP16.22■□□□□ 0.19
GAPDH-204ENST00000396859 MAP2K1Q02750 393 aaPredicted RBP16.22■□□□□ 0.19
GAPDH-204ENST00000396859 RRP1BQ14684 758 aaKnown RBP16.22■□□□□ 0.19
GAPDH-204ENST00000396859 RAB3GAP1Q15042 981 aa16.22■□□□□ 0.19
GAPDH-204ENST00000396859 TMEM179Q6ZVK1 233 aa16.22■□□□□ 0.19
GAPDH-204ENST00000396859 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
GAPDH-204ENST00000396859 BEGAINQ9BUH8 593 aa16.22■□□□□ 0.19
GAPDH-204ENST00000396859 SMIM22K7EJ46 135 aa16.21■□□□□ 0.19
GAPDH-204ENST00000396859 CXCL11O14625 94 aa16.21■□□□□ 0.19
GAPDH-204ENST00000396859 IRF6O14896 467 aa16.21■□□□□ 0.19
GAPDH-204ENST00000396859 CETPP11597 493 aa16.21■□□□□ 0.19
GAPDH-204ENST00000396859 GJA5P36382 358 aa16.21■□□□□ 0.19
GAPDH-204ENST00000396859 HAND2P61296 217 aa16.21■□□□□ 0.19
GAPDH-204ENST00000396859 PTH1RQ03431 593 aa16.21■□□□□ 0.19
GAPDH-204ENST00000396859 MFSD6Q6ZSS7 791 aa16.21■□□□□ 0.19
GAPDH-204ENST00000396859 ZNF280CQ8ND82 737 aa16.21■□□□□ 0.19
GAPDH-204ENST00000396859 THSD7BQ9C0I4 1608 aa16.2■□□□□ 0.18
GAPDH-204ENST00000396859 TRIM75PA6NK02 468 aa16.2■□□□□ 0.18
GAPDH-204ENST00000396859 EIF5BO60841 1220 aaKnown RBP16.2■□□□□ 0.18
GAPDH-204ENST00000396859 PRDM1O75626 825 aa16.2■□□□□ 0.18
GAPDH-204ENST00000396859 TSPY3P0CV98 308 aa16.2■□□□□ 0.18
GAPDH-204ENST00000396859 TSPY8P0CW00 308 aa16.2■□□□□ 0.18
GAPDH-204ENST00000396859 RASA1P20936 1047 aa16.2■□□□□ 0.18
GAPDH-204ENST00000396859 AKNAD1Q5T1N1 836 aa16.2■□□□□ 0.18
GAPDH-204ENST00000396859 OTUD7BQ6GQQ9 843 aa16.2■□□□□ 0.18
GAPDH-204ENST00000396859 FEZ1Q99689 392 aa16.2■□□□□ 0.18
GAPDH-204ENST00000396859 AFG3L2Q9Y4W6 797 aa16.2■□□□□ 0.18
GAPDH-204ENST00000396859 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 CCL15-CCL14A0A0B4J2E2 113 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 TSPY2A6NKD2 308 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 RANBP6O60518 1105 aaKnown RBP16.19■□□□□ 0.18
GAPDH-204ENST00000396859 REC8O95072 547 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 AKR1B1P15121 316 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 SPP2Q13103 211 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 SEPT2Q15019 361 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 CCL15Q16663 113 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 RRP12Q5JTH9 1297 aaKnown RBP16.19■□□□□ 0.18
GAPDH-204ENST00000396859 PPP4R3BQ5MIZ7 849 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 CCDC84Q86UT8 332 aaPredicted RBP16.19■□□□□ 0.18
GAPDH-204ENST00000396859 MAP4K1Q92918 833 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 WDR18Q9BV38 432 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 ARHGEF10LQ9HCE6 1279 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.19■□□□□ 0.18
GAPDH-204ENST00000396859 KCNH4Q9UQ05 1017 aa16.19■□□□□ 0.18
GAPDH-204ENST00000396859 RBM8AQ9Y5S9 174 aaKnown RBP16.19■□□□□ 0.18
GAPDH-204ENST00000396859 ORC4O43929 436 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 NT5C2P49902 561 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 JAG1P78504 1218 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 ICA1Q05084 483 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 TRDNQ13061 729 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 RNF20Q5VTR2 975 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 FASTKD5Q7L8L6 764 aaKnown RBP16.18■□□□□ 0.18
GAPDH-204ENST00000396859 JMYQ8N9B5 988 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 STAG1Q8WVM7 1258 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 ZIC5Q96T25 663 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 LSG1Q9H089 658 aaKnown RBP16.18■□□□□ 0.18
GAPDH-204ENST00000396859 SH2D4AQ9H788 454 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 CNNM2Q9H8M5 875 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 KANSL2Q9H9L4 492 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 TMOD4Q9NZQ9 345 aa16.18■□□□□ 0.18
GAPDH-204ENST00000396859 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
GAPDH-204ENST00000396859 C19orf81C9J6K1 198 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms