RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 TFAP4Q01664 338 aa17.78■□□□□ 0.44
PTPN20-206ENST00000395722 APOBRQ0VD83 1088 aa17.78■□□□□ 0.44
PTPN20-206ENST00000395722 ST3GAL1Q11201 340 aa17.78■□□□□ 0.44
PTPN20-206ENST00000395722 SART3Q15020 963 aaKnown RBP17.78■□□□□ 0.44
PTPN20-206ENST00000395722 FAM47AQ5JRC9 791 aa17.78■□□□□ 0.44
PTPN20-206ENST00000395722 ZNF444Q8N0Y2 327 aaPredicted RBP17.78■□□□□ 0.44
PTPN20-206ENST00000395722 NEDD1Q8NHV4 660 aa17.78■□□□□ 0.44
PTPN20-206ENST00000395722 CSRNP1Q96S65 589 aa17.78■□□□□ 0.44
PTPN20-206ENST00000395722 GREB1LQ9C091 1923 aaPredicted RBP17.78■□□□□ 0.44
PTPN20-206ENST00000395722 TMEM39BQ9GZU3 492 aa17.78■□□□□ 0.44
PTPN20-206ENST00000395722 BRPF3Q9ULD4 1205 aa17.78■□□□□ 0.44
PTPN20-206ENST00000395722 SCN4AP35499 1836 aa17.77■□□□□ 0.44
PTPN20-206ENST00000395722 TNKSO95271 1327 aa17.77■□□□□ 0.44
PTPN20-206ENST00000395722 RASA3Q14644 834 aa17.77■□□□□ 0.44
PTPN20-206ENST00000395722 TATDN1Q6P1N9 297 aa17.77■□□□□ 0.44
PTPN20-206ENST00000395722 IQCA1Q86XH1 822 aa17.77■□□□□ 0.44
PTPN20-206ENST00000395722 ENAHQ8N8S7 591 aaPredicted RBP17.77■□□□□ 0.44
PTPN20-206ENST00000395722 ANKS1AQ92625 1134 aa17.77■□□□□ 0.44
PTPN20-206ENST00000395722 TEPSINQ96N21 525 aa17.77■□□□□ 0.44
PTPN20-206ENST00000395722 UBAC1Q9BSL1 405 aa17.77■□□□□ 0.44
PTPN20-206ENST00000395722 SENP2Q9HC62 589 aa17.77■□□□□ 0.44
PTPN20-206ENST00000395722 HERC5Q9UII4 1024 aaKnown RBP17.77■□□□□ 0.44
PTPN20-206ENST00000395722 PITPNM2Q9BZ72 1349 aa17.77■□□□□ 0.43
PTPN20-206ENST00000395722 TSPY2A6NKD2 308 aa17.77■□□□□ 0.43
PTPN20-206ENST00000395722 PFKFB2O60825 505 aa17.77■□□□□ 0.43
PTPN20-206ENST00000395722 MAP3K10Q02779 954 aa17.77■□□□□ 0.43
PTPN20-206ENST00000395722 APOBEC3FQ8IUX4 373 aaKnown RBP17.77■□□□□ 0.43
PTPN20-206ENST00000395722 TMTC2Q8N394 836 aa17.77■□□□□ 0.43
PTPN20-206ENST00000395722 INTS4Q96HW7 963 aaKnown RBP17.77■□□□□ 0.43
PTPN20-206ENST00000395722 ZKSCAN3Q9BRR0 538 aa17.77■□□□□ 0.43
PTPN20-206ENST00000395722 IL17RBQ9NRM6 502 aa17.77■□□□□ 0.43
PTPN20-206ENST00000395722 TBC1D12O60347 775 aa17.76■□□□□ 0.43
PTPN20-206ENST00000395722 PDIA3P30101 505 aaKnown RBP17.76■□□□□ 0.43
PTPN20-206ENST00000395722 NOVP48745 357 aa17.76■□□□□ 0.43
PTPN20-206ENST00000395722 WTAPQ15007 396 aa17.76■□□□□ 0.43
PTPN20-206ENST00000395722 CCDC178Q5BJE1 867 aa17.76■□□□□ 0.43
PTPN20-206ENST00000395722 ANGEL2Q5VTE6 544 aaKnown RBP17.76■□□□□ 0.43
PTPN20-206ENST00000395722 CRACR2BQ8N4Y2 399 aaPredicted RBP17.76■□□□□ 0.43
PTPN20-206ENST00000395722 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.76■□□□□ 0.43
PTPN20-206ENST00000395722 ERICH2A1L162 156 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 TSPY3P0CV98 308 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 TSPY8P0CW00 308 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 SLURP2P0DP57 97 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 RCSD1Q6JBY9 416 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 CDAN1Q8IWY9 1227 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 CCDC17Q96LX7 622 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 HPS5Q9UPZ3 1129 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 NID2Q14112 1375 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 IGKV6D-41A0A0C4DH26 115 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 KLF18A0A0U1RQI7 1052 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 GTF3C6Q969F1 213 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 GGA3Q9NZ52 723 aa17.75■□□□□ 0.43
PTPN20-206ENST00000395722 POTECB2RU33 542 aa17.74■□□□□ 0.43
PTPN20-206ENST00000395722 NMT2O60551 498 aa17.74■□□□□ 0.43
PTPN20-206ENST00000395722 AKR1B1P15121 316 aa17.74■□□□□ 0.43
PTPN20-206ENST00000395722 RCAN1P53805 252 aa17.74■□□□□ 0.43
PTPN20-206ENST00000395722 APOA5Q6Q788 366 aa17.74■□□□□ 0.43
PTPN20-206ENST00000395722 USP50Q70EL3 339 aaPredicted RBP17.74■□□□□ 0.43
PTPN20-206ENST00000395722 DGKHQ86XP1 1220 aa17.74■□□□□ 0.43
PTPN20-206ENST00000395722 DEFB129Q9H1M3 183 aa17.74■□□□□ 0.43
PTPN20-206ENST00000395722 PPP2R3BQ9Y5P8 575 aa17.74■□□□□ 0.43
PTPN20-206ENST00000395722 FAM196BA6NMK8 535 aa17.73■□□□□ 0.43
PTPN20-206ENST00000395722 DDIT3P35638 169 aa17.73■□□□□ 0.43
PTPN20-206ENST00000395722 NECAB1Q8N987 351 aa17.73■□□□□ 0.43
PTPN20-206ENST00000395722 UTRNP46939 3433 aa17.73■□□□□ 0.43
PTPN20-206ENST00000395722 EPHX2P34913 555 aa17.73■□□□□ 0.43
PTPN20-206ENST00000395722 CCDC83Q8IWF9 413 aa17.73■□□□□ 0.43
PTPN20-206ENST00000395722 TRIM34Q9BYJ4 488 aa17.73■□□□□ 0.43
PTPN20-206ENST00000395722 SLKQ9H2G2 1235 aaPredicted RBP17.73■□□□□ 0.43
PTPN20-206ENST00000395722 IQCA1LA6NCM1 817 aa17.72■□□□□ 0.43
PTPN20-206ENST00000395722 CCDC69A6NI79 296 aa17.72■□□□□ 0.43
PTPN20-206ENST00000395722 GOLGA8BA8MQT2 603 aa17.72■□□□□ 0.43
PTPN20-206ENST00000395722 SCRN1Q12765 414 aa17.72■□□□□ 0.43
PTPN20-206ENST00000395722 IFIT1BQ5T764 474 aaKnown RBP17.72■□□□□ 0.43
PTPN20-206ENST00000395722 TAF1DQ9H5J8 278 aaPredicted RBP17.72■□□□□ 0.43
PTPN20-206ENST00000395722 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.72■□□□□ 0.43
PTPN20-206ENST00000395722 HSP90AA1P07900 732 aaKnown RBP17.71■□□□□ 0.43
PTPN20-206ENST00000395722 STK3Q13188 491 aa17.71■□□□□ 0.43
PTPN20-206ENST00000395722 CERKLQ49MI3 558 aaPredicted RBP17.71■□□□□ 0.43
PTPN20-206ENST00000395722 NFXL1Q6ZNB6 911 aa17.71■□□□□ 0.43
PTPN20-206ENST00000395722 SPRYD3Q8NCJ5 442 aa17.71■□□□□ 0.43
PTPN20-206ENST00000395722 ZC3H15Q8WU90 426 aaKnown RBP17.71■□□□□ 0.43
PTPN20-206ENST00000395722 SCAF8Q9UPN6 1271 aaKnown RBP17.71■□□□□ 0.43
PTPN20-206ENST00000395722 SLC12A7Q9Y666 1083 aa17.71■□□□□ 0.43
PTPN20-206ENST00000395722 RRP1BQ14684 758 aaKnown RBP17.71■□□□□ 0.43
PTPN20-206ENST00000395722 ZNF654Q8IZM8 581 aa17.71■□□□□ 0.43
PTPN20-206ENST00000395722 CEP95Q96GE4 821 aa17.71■□□□□ 0.43
PTPN20-206ENST00000395722 MTMR4Q9NYA4 1195 aa17.71■□□□□ 0.43
PTPN20-206ENST00000395722 ZBTB43O43298 467 aa17.7■□□□□ 0.42
PTPN20-206ENST00000395722 CHMP4CQ96CF2 233 aa17.7■□□□□ 0.42
PTPN20-206ENST00000395722 CWC22Q9HCG8 908 aaKnown RBP17.7■□□□□ 0.42
PTPN20-206ENST00000395722 FOXD4L1Q9NU39 408 aa17.7■□□□□ 0.42
PTPN20-206ENST00000395722 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.7■□□□□ 0.42
PTPN20-206ENST00000395722 POLR2AP24928 1970 aaKnown RBP17.7■□□□□ 0.42
PTPN20-206ENST00000395722 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
PTPN20-206ENST00000395722 DDAH1O94760 285 aa17.7■□□□□ 0.42
PTPN20-206ENST00000395722 TROAPQ12815 778 aa17.7■□□□□ 0.42
PTPN20-206ENST00000395722 LLPHQ9BRT6 129 aaKnown RBP17.7■□□□□ 0.42
PTPN20-206ENST00000395722 FAM217BQ9NTX9 383 aaPredicted RBP17.7■□□□□ 0.42
PTPN20-206ENST00000395722 GUCY1A2P33402 732 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms