RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 EXOC5O00471 708 aa8.07□□□□□ -1.12
AP3S1-202ENST00000395548 CABP4P57796 275 aa8.07□□□□□ -1.12
AP3S1-202ENST00000395548 MAP2K1Q02750 393 aaPredicted RBP8.07□□□□□ -1.12
AP3S1-202ENST00000395548 PDE4CQ08493 712 aa8.07□□□□□ -1.12
AP3S1-202ENST00000395548 PRSS36Q5K4E3 855 aa8.07□□□□□ -1.12
AP3S1-202ENST00000395548 C9orf131Q5VYM1 1079 aa8.07□□□□□ -1.12
AP3S1-202ENST00000395548 KLHL23Q8NBE8 558 aa8.07□□□□□ -1.12
AP3S1-202ENST00000395548 ADAM19Q9H013 955 aa8.07□□□□□ -1.12
AP3S1-202ENST00000395548 EGFL7Q9UHF1 273 aa8.07□□□□□ -1.12
AP3S1-202ENST00000395548 CNTNAP1P78357 1384 aa8.07□□□□□ -1.12
AP3S1-202ENST00000395548 ABCC11Q96J66 1382 aa8.07□□□□□ -1.12
AP3S1-202ENST00000395548 TRPM3Q9HCF6 1732 aaPredicted RBP8.06□□□□□ -1.12
AP3S1-202ENST00000395548 ANKARQ7Z5J8 1434 aa8.06□□□□□ -1.12
AP3S1-202ENST00000395548 A0A0C4DFX4 3053 aa8.06□□□□□ -1.12
AP3S1-202ENST00000395548 F8W735 103 aaPredicted RBP8.06□□□□□ -1.12
AP3S1-202ENST00000395548 PHACTR2O75167 634 aa8.06□□□□□ -1.12
AP3S1-202ENST00000395548 VEGFAP15692 232 aaPredicted RBP8.06□□□□□ -1.12
AP3S1-202ENST00000395548 HMGB2P26583 209 aaKnown RBP8.06□□□□□ -1.12
AP3S1-202ENST00000395548 CD68P34810 354 aaPredicted RBP8.06□□□□□ -1.12
AP3S1-202ENST00000395548 LRRC37A3O60309 1634 aa8.06□□□□□ -1.12
AP3S1-202ENST00000395548 CPDO75976 1380 aa8.06□□□□□ -1.12
AP3S1-202ENST00000395548 RPGRIP1LQ68CZ1 1315 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 KCPQ6ZWJ8 1503 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 FSCN2O14926 492 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 FZD6O60353 706 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 TNFRSF21O75509 655 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 CDC25BP30305 580 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 ZNF211Q13398 564 aaPredicted RBP8.05□□□□□ -1.12
AP3S1-202ENST00000395548 TXNDC11Q6PKC3 985 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 DZIP1LQ8IYY4 767 aaKnown RBP8.05□□□□□ -1.12
AP3S1-202ENST00000395548 Q8N3U1 123 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 GALNT11Q8NCW6 608 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 NGDNQ8NEJ9 315 aaKnown RBP8.05□□□□□ -1.12
AP3S1-202ENST00000395548 SNX29Q8TEQ0 813 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 WNT8BQ93098 351 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 MEGF10Q96KG7 1140 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 CHRDQ9H2X0 955 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 ANO2Q9NQ90 1003 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 SH2B1Q9NRF2 756 aaPredicted RBP8.05□□□□□ -1.12
AP3S1-202ENST00000395548 DZANK1Q9NVP4 752 aa8.05□□□□□ -1.12
AP3S1-202ENST00000395548 CRYBG1Q9Y4K1 1723 aa8.04□□□□□ -1.12
AP3S1-202ENST00000395548 PDE2AO00408 941 aaPredicted RBP8.04□□□□□ -1.12
AP3S1-202ENST00000395548 ALX3O95076 343 aa8.04□□□□□ -1.12
AP3S1-202ENST00000395548 EDN3P14138 238 aa8.04□□□□□ -1.12
AP3S1-202ENST00000395548 TOM1L2Q6ZVM7 507 aa8.04□□□□□ -1.12
AP3S1-202ENST00000395548 FLAD1Q8NFF5 587 aa8.04□□□□□ -1.12
AP3S1-202ENST00000395548 SEC31BQ9NQW1 1179 aa8.04□□□□□ -1.12
AP3S1-202ENST00000395548 PLEKHH1Q9ULM0 1364 aa8.04□□□□□ -1.12
AP3S1-202ENST00000395548 USP6P35125 1406 aa8.03□□□□□ -1.12
AP3S1-202ENST00000395548 TNRC6CQ9HCJ0 1690 aaKnown RBP8.03□□□□□ -1.12
AP3S1-202ENST00000395548 COL5A2P05997 1499 aaPredicted RBP8.03□□□□□ -1.12
AP3S1-202ENST00000395548 H3BRJ5 948 aa8.03□□□□□ -1.12
AP3S1-202ENST00000395548 NFKBIEO00221 500 aa8.03□□□□□ -1.12
AP3S1-202ENST00000395548 ICMTO60725 284 aa8.03□□□□□ -1.12
AP3S1-202ENST00000395548 EPHA1P21709 976 aa8.03□□□□□ -1.12
AP3S1-202ENST00000395548 HABP4Q5JVS0 413 aaKnown RBP8.03□□□□□ -1.12
AP3S1-202ENST00000395548 COL23A1Q86Y22 540 aaPredicted RBP8.03□□□□□ -1.12
AP3S1-202ENST00000395548 GJD3Q8N144 294 aa8.03□□□□□ -1.12
AP3S1-202ENST00000395548 TMEM102Q8N9M5 508 aaPredicted RBP8.03□□□□□ -1.12
AP3S1-202ENST00000395548 ACSBG1Q96GR2 724 aa8.03□□□□□ -1.12
AP3S1-202ENST00000395548 CCDC87Q9NVE4 849 aa8.03□□□□□ -1.12
AP3S1-202ENST00000395548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.03□□□□□ -1.12
AP3S1-202ENST00000395548 RGPD8O14715 1765 aaPredicted RBP8.02□□□□□ -1.13
AP3S1-202ENST00000395548 AKAP12Q02952 1782 aa8.02□□□□□ -1.13
AP3S1-202ENST00000395548 EIF3AQ14152 1382 aaKnown RBP8.02□□□□□ -1.13
AP3S1-202ENST00000395548 EREGO14944 169 aa8.02□□□□□ -1.13
AP3S1-202ENST00000395548 GLB1P16278 677 aa8.02□□□□□ -1.13
AP3S1-202ENST00000395548 ADAMTSL4Q6UY14 1074 aa8.02□□□□□ -1.13
AP3S1-202ENST00000395548 Q6ZS46 218 aa8.02□□□□□ -1.13
AP3S1-202ENST00000395548 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.02□□□□□ -1.13
AP3S1-202ENST00000395548 GLYCTKQ8IVS8 523 aa8.02□□□□□ -1.13
AP3S1-202ENST00000395548 SLC17A8Q8NDX2 589 aa8.02□□□□□ -1.13
AP3S1-202ENST00000395548 OSMRQ99650 979 aa8.02□□□□□ -1.13
AP3S1-202ENST00000395548 CARD10Q9BWT7 1032 aa8.02□□□□□ -1.13
AP3S1-202ENST00000395548 OSGEPQ9NPF4 335 aa8.02□□□□□ -1.13
AP3S1-202ENST00000395548 ACPPP15309 386 aa8.01□□□□□ -1.13
AP3S1-202ENST00000395548 ARL4DP49703 201 aa8.01□□□□□ -1.13
AP3S1-202ENST00000395548 DUOXA2Q1HG44 320 aa8.01□□□□□ -1.13
AP3S1-202ENST00000395548 FOXD4L6Q3SYB3 417 aaPredicted RBP8.01□□□□□ -1.13
AP3S1-202ENST00000395548 XP32Q5T750 250 aa8.01□□□□□ -1.13
AP3S1-202ENST00000395548 FOXD4L3Q6VB84 417 aaPredicted RBP8.01□□□□□ -1.13
AP3S1-202ENST00000395548 PRR23CQ6ZRP0 262 aa8.01□□□□□ -1.13
AP3S1-202ENST00000395548 ACAD11Q709F0 780 aa8.01□□□□□ -1.13
AP3S1-202ENST00000395548 SLC51AQ86UW1 340 aa8.01□□□□□ -1.13
AP3S1-202ENST00000395548 CEP41Q9BYV8 373 aa8.01□□□□□ -1.13
AP3S1-202ENST00000395548 MCOLN1Q9GZU1 580 aa8.01□□□□□ -1.13
AP3S1-202ENST00000395548 BRPF3Q9ULD4 1205 aa8.01□□□□□ -1.13
AP3S1-202ENST00000395548 NHSQ6T4R5 1651 aa8.01□□□□□ -1.13
AP3S1-202ENST00000395548 LMO7Q8WWI1 1683 aa8□□□□□ -1.13
AP3S1-202ENST00000395548 SCO2A0A1W2PP80 73 aa8□□□□□ -1.13
AP3S1-202ENST00000395548 AGGF1Q8N302 714 aaeCLIP8□□□□□ -1.13
AP3S1-202ENST00000395548 BSNDQ8WZ55 320 aa8□□□□□ -1.13
AP3S1-202ENST00000395548 NXPE3Q969Y0 559 aa8□□□□□ -1.13
AP3S1-202ENST00000395548 KLHDC7BQ96G42 594 aa8□□□□□ -1.13
AP3S1-202ENST00000395548 ZFYVE28Q9HCC9 887 aa8□□□□□ -1.13
AP3S1-202ENST00000395548 RNF181Q9P0P0 153 aa8□□□□□ -1.13
AP3S1-202ENST00000395548 FOXD3Q9UJU5 478 aaPredicted RBP8□□□□□ -1.13
AP3S1-202ENST00000395548 IFT172Q9UG01 1749 aa8□□□□□ -1.13
AP3S1-202ENST00000395548 TRPM1Q7Z4N2 1603 aa8□□□□□ -1.13
AP3S1-202ENST00000395548 NUP155O75694 1391 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms