RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 TMOD4Q9NZQ9 345 aa13.58□□□□□ -0.23
SIN3A-202ENST00000394947 BMP15O95972 392 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 CCDC38Q502W7 563 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 CMTR1Q8N1G2 835 aaKnown RBP13.58□□□□□ -0.24
SIN3A-202ENST00000394947 ARFGAP2Q8N6H7 521 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 SYNDIG1LA6NDD5 238 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 RPL13P26373 211 aaKnown RBP13.58□□□□□ -0.24
SIN3A-202ENST00000394947 LONRF2Q1L5Z9 754 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 EAPPQ56P03 285 aaPredicted RBP13.58□□□□□ -0.24
SIN3A-202ENST00000394947 PSPC1Q8WXF1 523 aaKnown RBP13.58□□□□□ -0.24
SIN3A-202ENST00000394947 KIF9Q9HAQ2 790 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 NLRC4Q9NPP4 1024 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 LRRC9Q6ZRR7 1453 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 MYLK4Q86YV6 388 aaPredicted RBP13.58□□□□□ -0.24
SIN3A-202ENST00000394947 SECISBP2LQ93073 1101 aaKnown RBP13.58□□□□□ -0.24
SIN3A-202ENST00000394947 CABS1Q96KC9 395 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 RAB3IPQ96QF0 476 aaPredicted RBP13.58□□□□□ -0.24
SIN3A-202ENST00000394947 PHEXP78562 749 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 PLCB4Q15147 1175 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 BMP2KLQ5H9B9 411 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 DENND2CQ68D51 928 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 CYP26C1Q6V0L0 522 aa13.58□□□□□ -0.24
SIN3A-202ENST00000394947 STMN1P16949 149 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 MTX1Q13505 466 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 SND1Q7KZF4 910 aaKnown RBP eCLIP13.57□□□□□ -0.24
SIN3A-202ENST00000394947 TAOK1Q7L7X3 1001 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 CERS3Q8IU89 383 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 HDAC11Q96DB2 347 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 TRIM56Q9BRZ2 755 aaKnown RBP13.57□□□□□ -0.24
SIN3A-202ENST00000394947 AATFQ9NY61 560 aaKnown RBP eCLIP13.57□□□□□ -0.24
SIN3A-202ENST00000394947 INPP5FQ9Y2H2 1132 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
SIN3A-202ENST00000394947 GAPVD1Q14C86 1478 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 RNF113AO15541 343 aaKnown RBP13.57□□□□□ -0.24
SIN3A-202ENST00000394947 TNNI1P19237 187 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 IFT20Q8IY31 132 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 UBE2Q2Q8WVN8 375 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 TSC1Q92574 1164 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 PHKBQ93100 1093 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 MMS19Q96T76 1030 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 SUFUQ9UMX1 484 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 NUB1Q9Y5A7 615 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 CAMSAP2Q08AD1 1489 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 CALML3P27482 149 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 GCKP35557 465 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 ELP1O95163 1332 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 GRM8O00222 908 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 CNGA1P29973 690 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 ABTB1Q969K4 478 aaPredicted RBP13.57□□□□□ -0.24
SIN3A-202ENST00000394947 PTPN22Q9Y2R2 807 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 ATF7P17544 494 aaPredicted RBP13.57□□□□□ -0.24
SIN3A-202ENST00000394947 KRT24Q2M2I5 525 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 CNGA4Q8IV77 575 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 ANKRD35Q8N283 1001 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 CARD10Q9BWT7 1032 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 DPH5Q9H2P9 285 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 BICC1Q9H694 974 aaKnown RBP13.57□□□□□ -0.24
SIN3A-202ENST00000394947 IRS4O14654 1257 aaPredicted RBP13.57□□□□□ -0.24
SIN3A-202ENST00000394947 GNA11P29992 359 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 CYP2J2P51589 502 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 MMEL1Q495T6 779 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 ANKRD20A3Q5VUR7 823 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 IQUBQ8NA54 791 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 NOX5Q96PH1 765 aa13.57□□□□□ -0.24
SIN3A-202ENST00000394947 LLGL1Q15334 1064 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 MYSM1Q5VVJ2 828 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 PHLDB2Q86SQ0 1253 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 TEX11Q8IYF3 940 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 FAM207AQ9NSI2 230 aaPredicted RBP13.56□□□□□ -0.24
SIN3A-202ENST00000394947 CAPN7Q9Y6W3 813 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
SIN3A-202ENST00000394947 SRGAP1Q7Z6B7 1085 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 TTC30AQ86WT1 665 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 ADKP55263 362 aaKnown RBP13.56□□□□□ -0.24
SIN3A-202ENST00000394947 MIER3Q7Z3K6 550 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 B4DLN1 442 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 STX2P32856 288 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 MRPL12P52815 198 aaKnown RBP13.56□□□□□ -0.24
SIN3A-202ENST00000394947 YARSP54577 528 aaKnown RBP13.56□□□□□ -0.24
SIN3A-202ENST00000394947 RCN2Q14257 317 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 APOL6Q9BWW8 343 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 LRPPRCP42704 1394 aaKnown RBP13.56□□□□□ -0.24
SIN3A-202ENST00000394947 APOEP02649 317 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 FAM102BQ5T8I3 360 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 TPH2Q8IWU9 490 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 NME8Q8N427 588 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 CDC26Q8NHZ8 85 aa13.56□□□□□ -0.24
SIN3A-202ENST00000394947 V9GY48 417 aaPredicted RBP13.56□□□□□ -0.24
SIN3A-202ENST00000394947 ZCRB1Q8TBF4 217 aaKnown RBP13.55□□□□□ -0.24
SIN3A-202ENST00000394947 KIAA1107Q9UPP5 1409 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 NAA35Q5VZE5 725 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 CFBP00751 764 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 DBN1Q16643 649 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 TTBK2Q6IQ55 1244 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 RYBPQ8N488 228 aaPredicted RBP13.55□□□□□ -0.24
SIN3A-202ENST00000394947 U2AF1L4Q8WU68 220 aaKnown RBP13.55□□□□□ -0.24
SIN3A-202ENST00000394947 KCNJ14Q9UNX9 436 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 LPXNO60711 386 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 KRT3P12035 628 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 MYL5Q02045 173 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms