RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 MRPL44Q9H9J2 332 aaKnown RBP11.58□□□□□ -0.56
COL4A6-203ENST00000394872 CUTAO60888 179 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 CTSWP56202 376 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 PAK1Q13153 545 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 HERC4Q5GLZ8 1057 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-203ENST00000394872 RAD51AP2Q09MP3 1159 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 CCDC121Q6ZUS5 278 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 SEC62Q99442 399 aaKnown RBP11.58□□□□□ -0.56
COL4A6-203ENST00000394872 SLC5A4Q9NY91 659 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 SPC25Q9HBM1 224 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 AOX1Q06278 1338 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 ERVV-2B6SEH9 535 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 ARID4AP29374 1257 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-203ENST00000394872 TPD52P55327 224 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-203ENST00000394872 KMT5BQ4FZB7 885 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 OTUD7AQ8TE49 926 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-203ENST00000394872 TIGD1Q96MW7 591 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 DNAJC21Q5F1R6 531 aaKnown RBP11.57□□□□□ -0.56
COL4A6-203ENST00000394872 MFSD14BQ5SR56 506 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 CPLX4Q7Z7G2 160 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 CABP7Q86V35 215 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 UBL4BQ8N7F7 174 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 TNFAIP1Q13829 316 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 ARHGEF16Q5VV41 709 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 DPY19L2Q6NUT2 758 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 ARHGAP27Q6ZUM4 889 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 C2CD5Q86YS7 1000 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 HACE1Q8IYU2 909 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 IPO4Q8TEX9 1081 aaKnown RBP11.57□□□□□ -0.56
COL4A6-203ENST00000394872 ARPP21Q9UBL0 812 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-203ENST00000394872 USTQ9Y2C2 406 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 ADAMTS12P58397 1594 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-203ENST00000394872 EXOC3O60645 756 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 RPS8P62241 208 aaKnown RBP11.57□□□□□ -0.56
COL4A6-203ENST00000394872 NLRX1Q86UT6 975 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 PPANQ9NQ55 473 aaKnown RBP11.57□□□□□ -0.56
COL4A6-203ENST00000394872 VPS18Q9P253 973 aa11.57□□□□□ -0.56
COL4A6-203ENST00000394872 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.57□□□□□ -0.56
COL4A6-203ENST00000394872 ZEB2O60315 1214 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 MNAT1P51948 309 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 FAM47CQ5HY64 1035 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 OTUD7BQ6GQQ9 843 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 CYP26C1Q6V0L0 522 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 GADL1Q6ZQY3 521 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 GLG1Q92896 1179 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 OTUD6AQ7L8S5 288 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 ZNF496Q96IT1 587 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-203ENST00000394872 CFAP57Q96MR6 1250 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 ZKSCAN5Q9Y2L8 839 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 hCG_1642624A0A1W2PR95 340 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 TCP10L2B9ZVM9 353 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 GMNNO75496 209 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 KIF22Q14807 665 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 CEP128Q6ZU80 1094 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 CCDC125Q86Z20 511 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 TPH2Q8IWU9 490 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 NELFCDQ8IXH7 590 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 METTL13Q8N6R0 699 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 CHURC1Q8WUH1 139 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 NSMCE1Q8WV22 266 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 MRRFQ96E11 262 aaKnown RBP11.56□□□□□ -0.56
COL4A6-203ENST00000394872 KCNJ14Q9UNX9 436 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 WDR62O43379 1518 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 FLAD1Q8NFF5 587 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 CCDC160A6NGH7 325 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 RNASE9P60153 205 aaKnown RBP11.56□□□□□ -0.56
COL4A6-203ENST00000394872 PPARAQ07869 468 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 PPP2R5BQ15173 497 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 DCUN1D2Q6PH85 259 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 CHL1O00533 1208 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 BIRC2Q13490 618 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 PPP2R5DQ14738 602 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 MLXIPQ9HAP2 919 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 PFDN4Q9NQP4 134 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 SAMD15Q9P1V8 674 aa11.56□□□□□ -0.56
COL4A6-203ENST00000394872 ABCC2Q92887 1545 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 SHANK2Q9UPX8 1470 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 ZWINTO95229 277 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 CD19P15391 556 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 ATP5DP30049 168 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 IRX5P78411 483 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-203ENST00000394872 DOK7Q18PE1 504 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 CARD10Q9BWT7 1032 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 MAPKBP1O60336 1514 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 TESPA1A2RU30 521 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-203ENST00000394872 SORBS3O60504 671 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 CAPN2P17655 700 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 ITIH3Q06033 890 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 SETDB1Q15047 1291 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 CLUL1Q15846 466 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 ZNF365Q70YC5 407 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 PNMA6EA0A0J9YXQ4 647 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 FRMPD2Q68DX3 1309 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-203ENST00000394872 ERCC3P19447 782 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 EIF4A1P60842 406 aaKnown RBP11.55□□□□□ -0.56
COL4A6-203ENST00000394872 MIER3Q7Z3K6 550 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 REXO1Q8N1G1 1221 aaKnown RBP11.55□□□□□ -0.56
COL4A6-203ENST00000394872 GABPB2Q8TAK5 448 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-203ENST00000394872 NUP58Q9BVL2 599 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms