RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 SEC23AQ15436 765 aa22.48■■□□□ 1.19
RCCD1-201ENST00000394258 RGS22Q8NE09 1264 aa22.48■■□□□ 1.19
RCCD1-201ENST00000394258 OSBPL5Q9H0X9 879 aaPredicted RBP22.48■■□□□ 1.19
RCCD1-201ENST00000394258 PAXBP1Q9Y5B6 917 aa22.48■■□□□ 1.19
RCCD1-201ENST00000394258 FANCCQ00597 558 aa22.47■■□□□ 1.19
RCCD1-201ENST00000394258 SF3B3Q15393 1217 aaKnown RBP22.47■■□□□ 1.19
RCCD1-201ENST00000394258 MYH2Q9UKX2 1941 aa22.46■■□□□ 1.19
RCCD1-201ENST00000394258 USP17L12C9JPN9 530 aa22.46■■□□□ 1.19
RCCD1-201ENST00000394258 USP17L21D6R901 530 aa22.46■■□□□ 1.19
RCCD1-201ENST00000394258 POLR2DO15514 142 aaKnown RBP22.46■■□□□ 1.19
RCCD1-201ENST00000394258 AKAP17AQ02040 695 aaKnown RBP22.46■■□□□ 1.19
RCCD1-201ENST00000394258 FAM182BQ5T319 152 aa22.46■■□□□ 1.19
RCCD1-201ENST00000394258 GRAMD1CQ8IYS0 662 aa22.46■■□□□ 1.19
RCCD1-201ENST00000394258 SHISA4Q96DD7 197 aa22.46■■□□□ 1.19
RCCD1-201ENST00000394258 ZSCAN10Q96SZ4 725 aaPredicted RBP22.46■■□□□ 1.19
RCCD1-201ENST00000394258 BAZ2AQ9UIF9 1905 aaKnown RBP22.46■■□□□ 1.19
RCCD1-201ENST00000394258 GOLGA8FQ08AF8 430 aa22.46■■□□□ 1.19
RCCD1-201ENST00000394258 GOLGA8DPQ0D2H9 430 aa22.46■■□□□ 1.19
RCCD1-201ENST00000394258 E4F1Q66K89 784 aaPredicted RBP22.46■■□□□ 1.19
RCCD1-201ENST00000394258 USP49Q70CQ1 688 aa22.46■■□□□ 1.19
RCCD1-201ENST00000394258 FOXP1Q9H334 677 aaPredicted RBP22.46■■□□□ 1.19
RCCD1-201ENST00000394258 V9GY48 417 aaPredicted RBP22.46■■□□□ 1.19
RCCD1-201ENST00000394258 COL22A1Q8NFW1 1626 aaPredicted RBP22.46■■□□□ 1.19
RCCD1-201ENST00000394258 PLEKHA8P1O95397 391 aa22.45■■□□□ 1.19
RCCD1-201ENST00000394258 GSDMDP57764 484 aa22.45■■□□□ 1.19
RCCD1-201ENST00000394258 IFIT1BQ5T764 474 aaKnown RBP22.45■■□□□ 1.19
RCCD1-201ENST00000394258 AATFQ9NY61 560 aaKnown RBP eCLIP22.45■■□□□ 1.19
RCCD1-201ENST00000394258 AHDC1Q5TGY3 1603 aaPredicted RBP22.45■■□□□ 1.18
RCCD1-201ENST00000394258 NMT2O60551 498 aa22.45■■□□□ 1.18
RCCD1-201ENST00000394258 RILPL1Q5EBL4 403 aa22.45■■□□□ 1.18
RCCD1-201ENST00000394258 GTPBP4Q9BZE4 634 aaKnown RBP22.45■■□□□ 1.18
RCCD1-201ENST00000394258 FBXO2Q9UK22 296 aaPredicted RBP22.45■■□□□ 1.18
RCCD1-201ENST00000394258 SERPINC1P01008 464 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 BARGINQ6ZT62 677 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 BCORQ6W2J9 1755 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 BMP6P22004 513 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 RPS8P62241 208 aaKnown RBP22.44■■□□□ 1.18
RCCD1-201ENST00000394258 PDE4BQ07343 736 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 CTR9Q6PD62 1173 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 IMPACTQ9P2X3 320 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 SERTAD1Q9UHV2 236 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 TIAM2Q8IVF5 1701 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 FAM237AA0A1B0GTK4 181 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 PRR29P0C7W0 189 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 MECOMQ03112 1051 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 ZNF827Q17R98 1081 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 EARS2Q5JPH6 523 aaKnown RBP22.44■■□□□ 1.18
RCCD1-201ENST00000394258 FAM47AQ5JRC9 791 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 OLFM4Q6UX06 510 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 NBPF5PQ86XG9 351 aaPredicted RBP22.44■■□□□ 1.18
RCCD1-201ENST00000394258 FANCLQ9NW38 375 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 ANAPC4Q9UJX5 808 aa22.44■■□□□ 1.18
RCCD1-201ENST00000394258 CICQ96RK0 1608 aaPredicted RBP22.43■■□□□ 1.18
RCCD1-201ENST00000394258 PTPREP23469 700 aa22.43■■□□□ 1.18
RCCD1-201ENST00000394258 PRDX5P30044 214 aa22.43■■□□□ 1.18
RCCD1-201ENST00000394258 MYL5Q02045 173 aa22.43■■□□□ 1.18
RCCD1-201ENST00000394258 SLC51AQ86UW1 340 aa22.43■■□□□ 1.18
RCCD1-201ENST00000394258 ZNF215Q9UL58 517 aaPredicted RBP22.43■■□□□ 1.18
RCCD1-201ENST00000394258 IKBKBO14920 756 aa22.43■■□□□ 1.18
RCCD1-201ENST00000394258 SFPQP23246 707 aaKnown RBP eCLIP22.43■■□□□ 1.18
RCCD1-201ENST00000394258 UBASH3AP57075 661 aa22.43■■□□□ 1.18
RCCD1-201ENST00000394258 CFAP100Q494V2 611 aa22.43■■□□□ 1.18
RCCD1-201ENST00000394258 CATIPQ7Z7H3 387 aa22.43■■□□□ 1.18
RCCD1-201ENST00000394258 SETDB2Q96T68 719 aa22.43■■□□□ 1.18
RCCD1-201ENST00000394258 NID2Q14112 1375 aa22.42■■□□□ 1.18
RCCD1-201ENST00000394258 TMEM232C9JQI7 657 aa22.42■■□□□ 1.18
RCCD1-201ENST00000394258 IQCA1Q86XH1 822 aa22.42■■□□□ 1.18
RCCD1-201ENST00000394258 NLRP3Q96P20 1036 aa22.42■■□□□ 1.18
RCCD1-201ENST00000394258 CYP2D6P10635 497 aa22.42■■□□□ 1.18
RCCD1-201ENST00000394258 PKN1Q16512 942 aa22.42■■□□□ 1.18
RCCD1-201ENST00000394258 NOM1Q5C9Z4 860 aaKnown RBP22.42■■□□□ 1.18
RCCD1-201ENST00000394258 TXNRD3Q86VQ6 643 aa22.42■■□□□ 1.18
RCCD1-201ENST00000394258 NSUN4Q96CB9 384 aaKnown RBP22.42■■□□□ 1.18
RCCD1-201ENST00000394258 C8orf37Q96NL8 207 aa22.42■■□□□ 1.18
RCCD1-201ENST00000394258 CSRNP2Q9H175 543 aa22.42■■□□□ 1.18
RCCD1-201ENST00000394258 RNF26Q9BY78 433 aaPredicted RBP22.41■■□□□ 1.18
RCCD1-201ENST00000394258 GNPATO15228 680 aa22.41■■□□□ 1.18
RCCD1-201ENST00000394258 NPHP1O15259 732 aa22.41■■□□□ 1.18
RCCD1-201ENST00000394258 MDM2Q00987 491 aaPredicted RBP22.41■■□□□ 1.18
RCCD1-201ENST00000394258 POSTNQ15063 836 aa22.41■■□□□ 1.18
RCCD1-201ENST00000394258 FBXO33Q7Z6M2 555 aa22.41■■□□□ 1.18
RCCD1-201ENST00000394258 PPP1R13BQ96KQ4 1090 aa22.41■■□□□ 1.18
RCCD1-201ENST00000394258 HIBADHP31937 336 aaKnown RBP22.4■■□□□ 1.18
RCCD1-201ENST00000394258 MTA3Q9BTC8 594 aa22.4■■□□□ 1.18
RCCD1-201ENST00000394258 BRIP1Q9BX63 1249 aa22.4■■□□□ 1.18
RCCD1-201ENST00000394258 NRAPQ86VF7 1730 aa22.4■■□□□ 1.18
RCCD1-201ENST00000394258 AMIGO3Q86WK7 504 aa22.4■■□□□ 1.18
RCCD1-201ENST00000394258 MAN1B1Q9UKM7 699 aa22.4■■□□□ 1.18
RCCD1-201ENST00000394258 CACNA1SQ13698 1873 aa22.4■■□□□ 1.18
RCCD1-201ENST00000394258 WNT7AO00755 349 aa22.39■■□□□ 1.18
RCCD1-201ENST00000394258 TRMT44Q8IYL2 757 aaKnown RBP22.39■■□□□ 1.18
RCCD1-201ENST00000394258 CCDC150Q8NCX0 1101 aa22.39■■□□□ 1.18
RCCD1-201ENST00000394258 NGLY1Q96IV0 654 aa22.39■■□□□ 1.18
RCCD1-201ENST00000394258 ZPR1O75312 459 aa22.39■■□□□ 1.17
RCCD1-201ENST00000394258 TROAPQ12815 778 aa22.39■■□□□ 1.17
RCCD1-201ENST00000394258 XBP1P17861 261 aa22.38■■□□□ 1.17
RCCD1-201ENST00000394258 FUT2Q10981 343 aa22.38■■□□□ 1.17
RCCD1-201ENST00000394258 EPSTI1Q96J88 318 aa22.38■■□□□ 1.17
RCCD1-201ENST00000394258 DCP1AQ9NPI6 582 aaPredicted RBP22.38■■□□□ 1.17
RCCD1-201ENST00000394258 SRPRBQ9Y5M8 271 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms