RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 HNRNPUQ00839 825 aaKnown RBP eCLIP21.36■■□□□ 1.01
SNRPA1-202ENST00000394082 MTMR2Q13614 643 aa21.36■■□□□ 1.01
SNRPA1-202ENST00000394082 ERC1Q8IUD2 1116 aa21.36■■□□□ 1.01
SNRPA1-202ENST00000394082 TRIM34Q9BYJ4 488 aa21.36■■□□□ 1.01
SNRPA1-202ENST00000394082 C1orf115Q9H7X2 142 aa21.36■■□□□ 1.01
SNRPA1-202ENST00000394082 PALD1Q9ULE6 856 aa21.36■■□□□ 1.01
SNRPA1-202ENST00000394082 MYO5AQ9Y4I1 1855 aaKnown RBP21.35■■□□□ 1.01
SNRPA1-202ENST00000394082 HMGCRP04035 888 aa21.35■■□□□ 1.01
SNRPA1-202ENST00000394082 IRX3P78415 501 aaPredicted RBP21.35■■□□□ 1.01
SNRPA1-202ENST00000394082 GTF3C2Q8WUA4 911 aaPredicted RBP21.35■■□□□ 1.01
SNRPA1-202ENST00000394082 DEFB118Q96PH6 123 aa21.35■■□□□ 1.01
SNRPA1-202ENST00000394082 ZBTB21Q9ULJ3 1066 aa21.35■■□□□ 1.01
SNRPA1-202ENST00000394082 TFRCP02786 760 aaKnown RBP21.34■■□□□ 1.01
SNRPA1-202ENST00000394082 CYP7A1P22680 504 aa21.34■■□□□ 1.01
SNRPA1-202ENST00000394082 JAG1P78504 1218 aa21.34■■□□□ 1.01
SNRPA1-202ENST00000394082 TATDN1Q6P1N9 297 aa21.34■■□□□ 1.01
SNRPA1-202ENST00000394082 CEP85Q6P2H3 762 aa21.34■■□□□ 1.01
SNRPA1-202ENST00000394082 ANKLE1Q8NAG6 615 aa21.34■■□□□ 1.01
SNRPA1-202ENST00000394082 CCDC8Q9H0W5 538 aaPredicted RBP21.34■■□□□ 1.01
SNRPA1-202ENST00000394082 EHD4Q9H223 541 aa21.34■■□□□ 1.01
SNRPA1-202ENST00000394082 PRO3102Q9H379 93 aa21.34■■□□□ 1.01
SNRPA1-202ENST00000394082 TLR7Q9NYK1 1049 aaKnown RBP21.34■■□□□ 1.01
SNRPA1-202ENST00000394082 XRCC5P13010 732 aaKnown RBP21.33■■□□□ 1.01
SNRPA1-202ENST00000394082 HSP90AB4PQ58FF6 505 aa21.33■■□□□ 1.01
SNRPA1-202ENST00000394082 CHRDL2Q6WN34 429 aa21.33■■□□□ 1.01
SNRPA1-202ENST00000394082 GPRC5AQ8NFJ5 357 aa21.33■■□□□ 1.01
SNRPA1-202ENST00000394082 RPTORQ8N122 1335 aa21.32■■□□□ 1
SNRPA1-202ENST00000394082 IDH1O75874 414 aaKnown RBP21.32■■□□□ 1
SNRPA1-202ENST00000394082 HERVK_113P62684 666 aa21.32■■□□□ 1
SNRPA1-202ENST00000394082 MAP3K12Q12852 859 aa21.32■■□□□ 1
SNRPA1-202ENST00000394082 SOCS4Q8WXH5 440 aa21.32■■□□□ 1
SNRPA1-202ENST00000394082 P2RX7Q99572 595 aaKnown RBP21.32■■□□□ 1
SNRPA1-202ENST00000394082 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.32■■□□□ 1
SNRPA1-202ENST00000394082 SZT2Q5T011 3432 aa21.32■■□□□ 1
SNRPA1-202ENST00000394082 TRIOBPQ9H2D6 2365 aa21.32■■□□□ 1
SNRPA1-202ENST00000394082 MAPK4P31152 587 aa21.31■■□□□ 1
SNRPA1-202ENST00000394082 DYNLL1P63167 89 aaKnown RBP21.31■■□□□ 1
SNRPA1-202ENST00000394082 TRMT44Q8IYL2 757 aaKnown RBP21.31■■□□□ 1
SNRPA1-202ENST00000394082 C12orf42Q96LP6 360 aa21.31■■□□□ 1
SNRPA1-202ENST00000394082 HMX1Q9NP08 348 aaPredicted RBP21.31■■□□□ 1
SNRPA1-202ENST00000394082 SERPINB13Q9UIV8 391 aa21.31■■□□□ 1
SNRPA1-202ENST00000394082 TAOK2Q9UL54 1235 aa21.31■■□□□ 1
SNRPA1-202ENST00000394082 PLXNB2O15031 1838 aa21.3■■□□□ 1
SNRPA1-202ENST00000394082 A0A1W2PPC1 479 aa21.3■■□□□ 1
SNRPA1-202ENST00000394082 GDF11O95390 407 aa21.3■■□□□ 1
SNRPA1-202ENST00000394082 MS4A1P11836 297 aa21.3■■□□□ 1
SNRPA1-202ENST00000394082 USP17L2Q6R6M4 530 aa21.3■■□□□ 1
SNRPA1-202ENST00000394082 NECAB2Q7Z6G3 386 aa21.3■■□□□ 1
SNRPA1-202ENST00000394082 TTC6Q86TZ1 520 aa21.3■■□□□ 1
SNRPA1-202ENST00000394082 MAGEB6Q8N7X4 407 aa21.3■■□□□ 1
SNRPA1-202ENST00000394082 EMILIN3Q9NT22 766 aa21.3■■□□□ 1
SNRPA1-202ENST00000394082 RBM27Q9P2N5 1060 aaKnown RBP21.3■■□□□ 1
SNRPA1-202ENST00000394082 RBPJLQ9UBG7 517 aa21.3■■□□□ 1
SNRPA1-202ENST00000394082 SAP30BPQ9UHR5 308 aaKnown RBP21.3■■□□□ 1
SNRPA1-202ENST00000394082 ZBED9Q6R2W3 1325 aa21.29■■□□□ 1
SNRPA1-202ENST00000394082 USP5P45974 858 aa21.29■■□□□ 1
SNRPA1-202ENST00000394082 TTF1Q15361 905 aaPredicted RBP21.29■■□□□ 1
SNRPA1-202ENST00000394082 MAP3K21Q5TCX8 1036 aa21.29■■□□□ 1
SNRPA1-202ENST00000394082 NUDT12Q9BQG2 462 aa21.29■■□□□ 1
SNRPA1-202ENST00000394082 TXNRD2Q9NNW7 524 aa21.29■■□□□ 1
SNRPA1-202ENST00000394082 MYH1P12882 1939 aa21.29■■□□□ 1
SNRPA1-202ENST00000394082 EVI5O60447 810 aa21.28■■□□□ 1
SNRPA1-202ENST00000394082 GH2P01242 217 aa21.28■■□□□ 1
SNRPA1-202ENST00000394082 ERVK-9P63128 1117 aa21.28■■□□□ 1
SNRPA1-202ENST00000394082 ERVK-24P63145 666 aa21.28■■□□□ 1
SNRPA1-202ENST00000394082 SHROOM1Q2M3G4 852 aaPredicted RBP21.28■■□□□ 1
SNRPA1-202ENST00000394082 AACSQ86V21 672 aa21.28■■□□□ 1
SNRPA1-202ENST00000394082 MIGA1Q8NAN2 632 aa21.28■■□□□ 1
SNRPA1-202ENST00000394082 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.28■■□□□ 1
SNRPA1-202ENST00000394082 PAWRQ96IZ0 340 aaKnown RBP21.28■■□□□ 1
SNRPA1-202ENST00000394082 USP14P54578 494 aa21.27■■□□□ 1
SNRPA1-202ENST00000394082 TRIB2Q92519 343 aa21.27■■□□□ 1
SNRPA1-202ENST00000394082 USP6NLQ92738 828 aa21.27■■□□□ 1
SNRPA1-202ENST00000394082 RIOK1Q9BRS2 568 aaKnown RBP21.27■■□□□ 1
SNRPA1-202ENST00000394082 KIAA1683Q9H0B3 1180 aa21.27■■□□□ 1
SNRPA1-202ENST00000394082 ANTXR1Q9H6X2 564 aa21.27■■□□□ 1
SNRPA1-202ENST00000394082 EXOC6BQ9Y2D4 811 aa21.27■■□□□ 1
SNRPA1-202ENST00000394082 PDE3AQ14432 1141 aa21.26■□□□□ 0.99
SNRPA1-202ENST00000394082 LBX2Q6XYB7 198 aa21.26■□□□□ 0.99
SNRPA1-202ENST00000394082 RPAP2Q8IXW5 612 aaPredicted RBP21.26■□□□□ 0.99
SNRPA1-202ENST00000394082 MIER1Q8N108 512 aa21.26■□□□□ 0.99
SNRPA1-202ENST00000394082 RHPN1Q8TCX5 695 aa21.26■□□□□ 0.99
SNRPA1-202ENST00000394082 OGDHLQ9ULD0 1010 aa21.26■□□□□ 0.99
SNRPA1-202ENST00000394082 RABGAP1Q9Y3P9 1069 aa21.26■□□□□ 0.99
SNRPA1-202ENST00000394082 USP17L15C9J2P7 530 aa21.25■□□□□ 0.99
SNRPA1-202ENST00000394082 USP17L13C9JLJ4 530 aa21.25■□□□□ 0.99
SNRPA1-202ENST00000394082 USP17L11C9JVI0 530 aa21.25■□□□□ 0.99
SNRPA1-202ENST00000394082 USP17L18D6R9N7 530 aa21.25■□□□□ 0.99
SNRPA1-202ENST00000394082 USP17L22D6RA61 530 aa21.25■□□□□ 0.99
SNRPA1-202ENST00000394082 USP17L17D6RBQ6 530 aa21.25■□□□□ 0.99
SNRPA1-202ENST00000394082 USP17L19D6RCP7 530 aa21.25■□□□□ 0.99
SNRPA1-202ENST00000394082 USP17L20D6RJB6 530 aa21.25■□□□□ 0.99
SNRPA1-202ENST00000394082 USP17L24Q0WX57 530 aa21.25■□□□□ 0.99
SNRPA1-202ENST00000394082 Q3C1V9 767 aa21.25■□□□□ 0.99
SNRPA1-202ENST00000394082 CERKLQ49MI3 558 aaPredicted RBP21.25■□□□□ 0.99
SNRPA1-202ENST00000394082 NBPF3Q9H094 633 aa21.25■□□□□ 0.99
SNRPA1-202ENST00000394082 CYP2B6P20813 491 aa21.24■□□□□ 0.99
SNRPA1-202ENST00000394082 ABCB5Q2M3G0 1257 aa21.24■□□□□ 0.99
SNRPA1-202ENST00000394082 MORN1Q5T089 497 aa21.24■□□□□ 0.99
SNRPA1-202ENST00000394082 POTEEQ6S8J3 1075 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms