RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 GPKOWQ92917 476 aaPredicted RBP eCLIP21.43■■□□□ 1.028e-7■■■■□ 23.2
SMARCC2-203ENST00000394023 IPO7O95373 1038 aaKnown RBP21.43■■□□□ 1.02
SMARCC2-203ENST00000394023 USP17L8P0C7I0 530 aa21.43■■□□□ 1.02
SMARCC2-203ENST00000394023 ST5P78524 1137 aa21.43■■□□□ 1.02
SMARCC2-203ENST00000394023 FAM196AQ6ZSG2 479 aa21.43■■□□□ 1.02
SMARCC2-203ENST00000394023 FAM84BQ96KN1 310 aaPredicted RBP21.43■■□□□ 1.02
SMARCC2-203ENST00000394023 BLZF1Q9H2G9 400 aa21.43■■□□□ 1.02
SMARCC2-203ENST00000394023 STAG1Q8WVM7 1258 aa21.43■■□□□ 1.02
SMARCC2-203ENST00000394023 CSRNP2Q9H175 543 aa21.43■■□□□ 1.02
SMARCC2-203ENST00000394023 GOLGA8HP0CJ92 632 aa21.42■■□□□ 1.02
SMARCC2-203ENST00000394023 TERF1P54274 439 aa21.42■■□□□ 1.02
SMARCC2-203ENST00000394023 RBM6P78332 1123 aaKnown RBP21.42■■□□□ 1.02
SMARCC2-203ENST00000394023 GSTO1P78417 241 aa21.42■■□□□ 1.02
SMARCC2-203ENST00000394023 TEX11Q8IYF3 940 aa21.42■■□□□ 1.02
SMARCC2-203ENST00000394023 THRAP3Q9Y2W1 955 aaKnown RBP21.42■■□□□ 1.02
SMARCC2-203ENST00000394023 N4BP3O15049 544 aa21.42■■□□□ 1.02
SMARCC2-203ENST00000394023 DYNLL2Q96FJ2 89 aa21.42■■□□□ 1.02
SMARCC2-203ENST00000394023 STAT6P42226 847 aa21.42■■□□□ 1.02
SMARCC2-203ENST00000394023 NAPAP54920 295 aa21.42■■□□□ 1.02
SMARCC2-203ENST00000394023 STIM1Q13586 685 aa21.42■■□□□ 1.02
SMARCC2-203ENST00000394023 ZHX3Q9H4I2 956 aa21.42■■□□□ 1.02
SMARCC2-203ENST00000394023 KDM3BQ7LBC6 1761 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 FOXN1O15353 648 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 GNG11P61952 73 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 IQCB1Q15051 598 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 ALX1Q15699 326 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 ILDR1Q86SU0 546 aaPredicted RBP21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 ABCC12Q96J65 1359 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 BCL9O00512 1426 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 PPP6R2O75170 966 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 CCDC96Q2M329 555 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 CLEC4GQ6UXB4 293 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 LINC00116Q8NCU8 138 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 ZSWIM4Q9H7M6 989 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 BCL2L12Q9HB09 334 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 SHC4Q6S5L8 630 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 PLA2G4DQ86XP0 818 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 ZSCAN12O43309 604 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 ENAHQ8N8S7 591 aaPredicted RBP21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 RASGRP4Q8TDF6 673 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 UBXN4Q92575 508 aa21.41■■□□□ 1.02
SMARCC2-203ENST00000394023 KLRK1P26718 216 aa21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 CDC25AP30304 524 aa21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 C3orf67Q6ZVT6 689 aa21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 SGMS1Q86VZ5 419 aa21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 SMIM22K7EJ46 135 aa21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 KIF2AO00139 706 aaPredicted RBP21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 CCT6AP40227 531 aaKnown RBP21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 VGLL2Q8N8G2 317 aa21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 ENGASEQ8NFI3 743 aa21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 ZNF512BQ96KM6 892 aaPredicted RBP21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 BMP15O95972 392 aa21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 FGFR2P21802 821 aa21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 CASP1P29466 404 aa21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 DHX40Q8IX18 779 aaKnown RBP21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 NUP88Q99567 741 aaPredicted RBP21.4■■□□□ 1.02
SMARCC2-203ENST00000394023 WDR66Q8TBY9 1149 aa21.39■■□□□ 1.02
SMARCC2-203ENST00000394023 EPSTI1Q96J88 318 aa21.39■■□□□ 1.02
SMARCC2-203ENST00000394023 IQUBQ8NA54 791 aa21.39■■□□□ 1.01
SMARCC2-203ENST00000394023 PTGDRQ13258 359 aa21.39■■□□□ 1.01
SMARCC2-203ENST00000394023 SMYD4Q8IYR2 804 aaPredicted RBP21.39■■□□□ 1.01
SMARCC2-203ENST00000394023 FAM205CA6NFA0 338 aa21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 ARHGAP29Q52LW3 1261 aa21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 PNMA1Q8ND90 353 aa21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 ZNF622Q969S3 477 aaKnown RBP eCLIP21.38■■□□□ 1.013e-7■■□□□ 12.6
SMARCC2-203ENST00000394023 FOXP1Q9H334 677 aaPredicted RBP21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 TCP11L1Q9NUJ3 509 aa21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 BAZ2BQ9UIF8 2168 aaKnown RBP21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 CALML3P27482 149 aa21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 KARSQ15046 597 aaKnown RBP21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 WDR19Q8NEZ3 1342 aa21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 ADKP55263 362 aaKnown RBP21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 LETM2Q2VYF4 491 aa21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 ZNF771Q7L3S4 317 aaPredicted RBP21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 UIMC1Q96RL1 719 aa21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 RNF26Q9BY78 433 aaPredicted RBP21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 ADGRA1Q86SQ6 560 aa21.38■■□□□ 1.01
SMARCC2-203ENST00000394023 IDEP14735 1019 aa21.37■■□□□ 1.01
SMARCC2-203ENST00000394023 FOXP2O15409 715 aa21.37■■□□□ 1.01
SMARCC2-203ENST00000394023 SYMPKQ92797 1274 aaKnown RBP21.37■■□□□ 1.01
SMARCC2-203ENST00000394023 NBPF3Q9H094 633 aa21.37■■□□□ 1.01
SMARCC2-203ENST00000394023 ARGLU1Q9NWB6 273 aaPredicted RBP21.37■■□□□ 1.01
SMARCC2-203ENST00000394023 GNAQP50148 359 aa21.37■■□□□ 1.01
SMARCC2-203ENST00000394023 ZBTB9Q96C00 473 aa21.37■■□□□ 1.01
SMARCC2-203ENST00000394023 DTHD1Q6ZMT9 781 aa21.36■■□□□ 1.01
SMARCC2-203ENST00000394023 GGA1Q9UJY5 639 aa21.36■■□□□ 1.01
SMARCC2-203ENST00000394023 TCRBV5S4A2TA0A5A2 114 aa21.36■■□□□ 1.01
SMARCC2-203ENST00000394023 PRKCSHP14314 528 aaPredicted RBP21.36■■□□□ 1.01
SMARCC2-203ENST00000394023 PPP2R5BQ15173 497 aa21.36■■□□□ 1.01
SMARCC2-203ENST00000394023 MLKLQ8NB16 471 aa21.36■■□□□ 1.01
SMARCC2-203ENST00000394023 ARHGEF1Q92888 912 aaKnown RBP21.36■■□□□ 1.01
SMARCC2-203ENST00000394023 ARPP21Q9UBL0 812 aaPredicted RBP21.36■■□□□ 1.01
SMARCC2-203ENST00000394023 MROH7-TTC4A0A0A0MT08 1334 aa21.36■■□□□ 1.01
SMARCC2-203ENST00000394023 ZC3H12CQ9C0D7 883 aaKnown RBP21.36■■□□□ 1.01
SMARCC2-203ENST00000394023 CTNND2Q9UQB3 1225 aa21.36■■□□□ 1.01
SMARCC2-203ENST00000394023 USP17L3A6NCW0 530 aa21.35■■□□□ 1.01
SMARCC2-203ENST00000394023 USP17L4A6NCW7 530 aa21.35■■□□□ 1.01
SMARCC2-203ENST00000394023 SCG2P13521 617 aa21.35■■□□□ 1.01
SMARCC2-203ENST00000394023 GRIN1Q05586 938 aa21.35■■□□□ 1.01
SMARCC2-203ENST00000394023 CCDC178Q5BJE1 867 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms