RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CCL15-CCL14A0A0B4J2E2 113 aa22.72■■□□□ 1.23
PDLIM7-204ENST00000393546 A0A0D9SFI3 127 aa22.72■■□□□ 1.23
PDLIM7-204ENST00000393546 GDF11O95390 407 aa22.72■■□□□ 1.23
PDLIM7-204ENST00000393546 ALDH1A1P00352 501 aa22.72■■□□□ 1.23
PDLIM7-204ENST00000393546 CCL15Q16663 113 aa22.72■■□□□ 1.23
PDLIM7-204ENST00000393546 IFNL1Q8IU54 200 aa22.72■■□□□ 1.23
PDLIM7-204ENST00000393546 TBC1D2Q9BYX2 928 aa22.72■■□□□ 1.23
PDLIM7-204ENST00000393546 KCNH4Q9UQ05 1017 aa22.72■■□□□ 1.23
PDLIM7-204ENST00000393546 AFG3L2Q9Y4W6 797 aa22.72■■□□□ 1.23
PDLIM7-204ENST00000393546 DOCK1Q14185 1865 aa22.72■■□□□ 1.23
PDLIM7-204ENST00000393546 USP17L5A8MUK1 530 aa22.71■■□□□ 1.23
PDLIM7-204ENST00000393546 MINDY4BA8MYZ0 360 aa22.71■■□□□ 1.23
PDLIM7-204ENST00000393546 SHMT1P34896 483 aa22.71■■□□□ 1.23
PDLIM7-204ENST00000393546 MFAP1P55081 439 aaKnown RBP22.71■■□□□ 1.23
PDLIM7-204ENST00000393546 EVX2Q03828 476 aa22.71■■□□□ 1.23
PDLIM7-204ENST00000393546 DYNLL2Q96FJ2 89 aa22.71■■□□□ 1.23
PDLIM7-204ENST00000393546 EPB41L4AQ9HCS5 686 aaPredicted RBP22.71■■□□□ 1.23
PDLIM7-204ENST00000393546 CWC27Q6UX04 472 aaKnown RBP22.7■■□□□ 1.22
PDLIM7-204ENST00000393546 BRI3BPQ8WY22 251 aa22.7■■□□□ 1.22
PDLIM7-204ENST00000393546 NAPBQ9H115 298 aa22.7■■□□□ 1.22
PDLIM7-204ENST00000393546 AS3MTQ9HBK9 375 aa22.7■■□□□ 1.22
PDLIM7-204ENST00000393546 CABP5Q9NP86 173 aa22.7■■□□□ 1.22
PDLIM7-204ENST00000393546 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.7■■□□□ 1.22
PDLIM7-204ENST00000393546 IGF2BP3O00425 579 aaKnown RBP eCLIP22.69■■□□□ 1.22
PDLIM7-204ENST00000393546 JAG1P78504 1218 aa22.69■■□□□ 1.22
PDLIM7-204ENST00000393546 ABCB5Q2M3G0 1257 aa22.69■■□□□ 1.22
PDLIM7-204ENST00000393546 CCDC84Q86UT8 332 aaPredicted RBP22.69■■□□□ 1.22
PDLIM7-204ENST00000393546 PTPN18Q99952 460 aa22.69■■□□□ 1.22
PDLIM7-204ENST00000393546 TSKSQ9UJT2 592 aa22.69■■□□□ 1.22
PDLIM7-204ENST00000393546 ZBTB21Q9ULJ3 1066 aa22.69■■□□□ 1.22
PDLIM7-204ENST00000393546 GH2P01242 217 aa22.68■■□□□ 1.22
PDLIM7-204ENST00000393546 HSPA8P11142 646 aaKnown RBP22.68■■□□□ 1.22
PDLIM7-204ENST00000393546 CDK8P49336 464 aa22.68■■□□□ 1.22
PDLIM7-204ENST00000393546 C16orf86Q6ZW13 317 aa22.68■■□□□ 1.22
PDLIM7-204ENST00000393546 SLC44A5Q8NCS7 719 aa22.68■■□□□ 1.22
PDLIM7-204ENST00000393546 ZNF280CQ8ND82 737 aa22.68■■□□□ 1.22
PDLIM7-204ENST00000393546 ATAD5Q96QE3 1844 aa22.68■■□□□ 1.22
PDLIM7-204ENST00000393546 LAMB1P07942 1786 aa22.68■■□□□ 1.22
PDLIM7-204ENST00000393546 CCDC171Q6TFL3 1326 aa22.67■■□□□ 1.22
PDLIM7-204ENST00000393546 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
PDLIM7-204ENST00000393546 SMIM22K7EJ46 135 aa22.67■■□□□ 1.22
PDLIM7-204ENST00000393546 LBX1P52954 281 aa22.67■■□□□ 1.22
PDLIM7-204ENST00000393546 SPP2Q13103 211 aa22.67■■□□□ 1.22
PDLIM7-204ENST00000393546 FASTKD5Q7L8L6 764 aaKnown RBP22.67■■□□□ 1.22
PDLIM7-204ENST00000393546 WDR18Q9BV38 432 aa22.67■■□□□ 1.22
PDLIM7-204ENST00000393546 A0A0G2JLL6 359 aaPredicted RBP22.66■■□□□ 1.22
PDLIM7-204ENST00000393546 MPHOSPH10O00566 681 aaKnown RBP22.66■■□□□ 1.22
PDLIM7-204ENST00000393546 TBC1D8O95759 1140 aa22.66■■□□□ 1.22
PDLIM7-204ENST00000393546 ALX1Q15699 326 aa22.66■■□□□ 1.22
PDLIM7-204ENST00000393546 SHROOM1Q2M3G4 852 aaPredicted RBP22.66■■□□□ 1.22
PDLIM7-204ENST00000393546 VPS53Q5VIR6 699 aa22.66■■□□□ 1.22
PDLIM7-204ENST00000393546 PRRT2Q7Z6L0 340 aaPredicted RBP22.66■■□□□ 1.22
PDLIM7-204ENST00000393546 ZNF589Q86UQ0 364 aaPredicted RBP22.66■■□□□ 1.22
PDLIM7-204ENST00000393546 CCDC17Q96LX7 622 aa22.66■■□□□ 1.22
PDLIM7-204ENST00000393546 MKNK2Q9HBH9 465 aa22.66■■□□□ 1.22
PDLIM7-204ENST00000393546 BTBD19C9JJ37 291 aa22.65■■□□□ 1.22
PDLIM7-204ENST00000393546 SLC3A2P08195 630 aaKnown RBP22.65■■□□□ 1.22
PDLIM7-204ENST00000393546 HSPD1P10809 573 aaKnown RBP22.65■■□□□ 1.22
PDLIM7-204ENST00000393546 RAB3GAP1Q15042 981 aa22.65■■□□□ 1.22
PDLIM7-204ENST00000393546 SKAP1Q86WV1 359 aa22.65■■□□□ 1.22
PDLIM7-204ENST00000393546 RUFY2Q8WXA3 655 aa22.65■■□□□ 1.22
PDLIM7-204ENST00000393546 ZNF287Q9HBT7 754 aa22.65■■□□□ 1.22
PDLIM7-204ENST00000393546 ZCCHC17Q9NP64 241 aaKnown RBP22.65■■□□□ 1.22
PDLIM7-204ENST00000393546 PHIPQ8WWQ0 1821 aa22.65■■□□□ 1.22
PDLIM7-204ENST00000393546 FOXP2O15409 715 aa22.64■■□□□ 1.21
PDLIM7-204ENST00000393546 GADL1Q6ZQY3 521 aa22.64■■□□□ 1.21
PDLIM7-204ENST00000393546 ANKRD23Q86SG2 305 aa22.64■■□□□ 1.21
PDLIM7-204ENST00000393546 STK11IPQ8N1F8 1099 aa22.64■■□□□ 1.21
PDLIM7-204ENST00000393546 FAM43AQ8N2R8 423 aa22.64■■□□□ 1.21
PDLIM7-204ENST00000393546 CFHR5Q9BXR6 569 aa22.64■■□□□ 1.21
PDLIM7-204ENST00000393546 PRDM10Q9NQV6 1147 aa22.64■■□□□ 1.21
PDLIM7-204ENST00000393546 FGAP02671 866 aa22.63■■□□□ 1.21
PDLIM7-204ENST00000393546 CHMLP26374 656 aa22.63■■□□□ 1.21
PDLIM7-204ENST00000393546 PPARAQ07869 468 aa22.63■■□□□ 1.21
PDLIM7-204ENST00000393546 MOGSQ13724 837 aa22.63■■□□□ 1.21
PDLIM7-204ENST00000393546 TMEM179Q6ZVK1 233 aa22.63■■□□□ 1.21
PDLIM7-204ENST00000393546 C19orf81C9J6K1 198 aa22.62■■□□□ 1.21
PDLIM7-204ENST00000393546 USP17L10C9JJH3 530 aa22.62■■□□□ 1.21
PDLIM7-204ENST00000393546 BACE1P56817 501 aa22.62■■□□□ 1.21
PDLIM7-204ENST00000393546 PDE4BQ07343 736 aa22.62■■□□□ 1.21
PDLIM7-204ENST00000393546 SEPT2Q15019 361 aa22.62■■□□□ 1.21
PDLIM7-204ENST00000393546 TAF1CQ15572 869 aaPredicted RBP22.62■■□□□ 1.21
PDLIM7-204ENST00000393546 ZFYVE28Q9HCC9 887 aa22.62■■□□□ 1.21
PDLIM7-204ENST00000393546 MYH8P13535 1937 aa22.62■■□□□ 1.21
PDLIM7-204ENST00000393546 ROBO3Q96MS0 1386 aa22.62■■□□□ 1.21
PDLIM7-204ENST00000393546 PDHXO00330 501 aa22.61■■□□□ 1.21
PDLIM7-204ENST00000393546 AKR1B1P15121 316 aa22.61■■□□□ 1.21
PDLIM7-204ENST00000393546 HMGCS2P54868 508 aa22.61■■□□□ 1.21
PDLIM7-204ENST00000393546 BMP2KLQ5H9B9 411 aa22.61■■□□□ 1.21
PDLIM7-204ENST00000393546 SH3D19Q5HYK7 790 aa22.61■■□□□ 1.21
PDLIM7-204ENST00000393546 GPAT2Q6NUI2 795 aa22.61■■□□□ 1.21
PDLIM7-204ENST00000393546 ZNF444Q8N0Y2 327 aaPredicted RBP22.61■■□□□ 1.21
PDLIM7-204ENST00000393546 PROCA1Q8NCQ7 364 aaPredicted RBP22.61■■□□□ 1.21
PDLIM7-204ENST00000393546 TMOD4Q9NZQ9 345 aa22.61■■□□□ 1.21
PDLIM7-204ENST00000393546 GUCY1A2P33402 732 aa22.6■■□□□ 1.21
PDLIM7-204ENST00000393546 CRHR2Q13324 411 aa22.6■■□□□ 1.21
PDLIM7-204ENST00000393546 MTMR2Q13614 643 aa22.6■■□□□ 1.21
PDLIM7-204ENST00000393546 R3HDMLQ9H3Y0 253 aa22.6■■□□□ 1.21
PDLIM7-204ENST00000393546 ANAPC4Q9UJX5 808 aa22.6■■□□□ 1.21
PDLIM7-204ENST00000393546 ZMYM6O95789 1325 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms