RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 AIFM3Q96NN9 605 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 SLC40A1Q9NP59 571 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 WWC3Q9ULE0 1092 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 FAM184BQ9ULE4 1060 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 MAP3K2Q9Y2U5 619 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 SETD1BQ9UPS6 1966 aaKnown RBP8.09□□□□□ -1.11
NPHP1-203ENST00000393272 MLH3Q9UHC1 1453 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 GOLGA8BA8MQT2 603 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 TMCO5BA8MYB1 307 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 SKAP2O75563 359 aaPredicted RBP8.09□□□□□ -1.11
NPHP1-203ENST00000393272 IRX1P78414 480 aaPredicted RBP8.09□□□□□ -1.11
NPHP1-203ENST00000393272 SARNPP82979 210 aaKnown RBP8.09□□□□□ -1.11
NPHP1-203ENST00000393272 SKOR1P84550 965 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 YTHDF3Q7Z739 585 aaKnown RBP8.09□□□□□ -1.11
NPHP1-203ENST00000393272 VPS37DQ86XT2 251 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 SPATS2Q86XZ4 545 aaKnown RBP8.09□□□□□ -1.11
NPHP1-203ENST00000393272 CNGA4Q8IV77 575 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 SH2D3CQ8N5H7 860 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 ADD3Q9UEY8 706 aaKnown RBP8.09□□□□□ -1.11
NPHP1-203ENST00000393272 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.09□□□□□ -1.11
NPHP1-203ENST00000393272 SAR1BQ9Y6B6 198 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 ZMYM6O95789 1325 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 RNF225M0QZC1 329 aaPredicted RBP8.09□□□□□ -1.11
NPHP1-203ENST00000393272 ATP5JP18859 108 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 CDC25AP30304 524 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 SF3B2Q13435 895 aaKnown RBP8.09□□□□□ -1.11
NPHP1-203ENST00000393272 MORC3Q14149 939 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 NBPF14Q5TI25 921 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 FAM228AQ86W67 206 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 RBM28Q9NW13 759 aaKnown RBP8.09□□□□□ -1.11
NPHP1-203ENST00000393272 TFR2Q9UP52 801 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 HPS5Q9UPZ3 1129 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 REXO2Q9Y3B8 237 aaKnown RBP8.09□□□□□ -1.11
NPHP1-203ENST00000393272 MRC1P22897 1456 aa8.09□□□□□ -1.11
NPHP1-203ENST00000393272 FLT4P35916 1363 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 RFX7Q2KHR2 1363 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 A0A1B0GUA9 196 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 PSMD14O00487 310 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 SSBP05455 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
NPHP1-203ENST00000393272 STX17P56962 302 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 C2orf54Q08AI8 447 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 E2F5Q15329 346 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 TTC39AQ5SRH9 613 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 FAM43BQ6ZT52 329 aaPredicted RBP8.08□□□□□ -1.12
NPHP1-203ENST00000393272 TXNDC2Q86VQ3 553 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 TMTC1Q8IUR5 882 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 MAP3K14Q99558 947 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 SEC31BQ9NQW1 1179 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 ABHD10Q9NUJ1 306 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 DACH1Q9UI36 760 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 USP31Q70CQ4 1352 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 SH3TC1Q8TE82 1336 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 KLF18A0A0U1RQI7 1052 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 KLHL33A6NCF5 533 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 PDE2AO00408 941 aaPredicted RBP8.08□□□□□ -1.12
NPHP1-203ENST00000393272 CPLX1O14810 134 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 ZNF185O15231 689 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 LSP1P33241 339 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 SARSP49591 514 aaKnown RBP8.08□□□□□ -1.12
NPHP1-203ENST00000393272 PLCD1P51178 756 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 HDGFP51858 240 aaKnown RBP8.08□□□□□ -1.12
NPHP1-203ENST00000393272 CDR1P51861 262 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 EIF4A1P60842 406 aaKnown RBP8.08□□□□□ -1.12
NPHP1-203ENST00000393272 IFT88Q13099 833 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 PLCB4Q15147 1175 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 SNCBQ16143 134 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 NT5DC1Q5TFE4 455 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 KCTD16Q68DU8 428 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 KLHL10Q6JEL2 608 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 MICALCLQ6ZW33 695 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 TSEN2Q8NCE0 465 aaKnown RBP8.08□□□□□ -1.12
NPHP1-203ENST00000393272 ZNF483Q8TF39 744 aaPredicted RBP8.08□□□□□ -1.12
NPHP1-203ENST00000393272 ZNF473Q8WTR7 871 aaKnown RBP8.08□□□□□ -1.12
NPHP1-203ENST00000393272 SCLT1Q96NL6 688 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 PAGR1Q9BTK6 254 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 BABAM1Q9NWV8 329 aa8.08□□□□□ -1.12
NPHP1-203ENST00000393272 ANKARQ7Z5J8 1434 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 PALLDQ8WX93 1383 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 GRM8O00222 908 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 KCNQ3O43525 872 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 HDLBPQ00341 1268 aaKnown RBP8.07□□□□□ -1.12
NPHP1-203ENST00000393272 GUCY1A3Q02108 690 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 GRIN1Q05586 938 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 GRIK3Q13003 919 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 NAA25Q14CX7 972 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 EZH2Q15910 746 aaKnown RBP8.07□□□□□ -1.12
NPHP1-203ENST00000393272 TLDC1Q6P9B6 456 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 CYB5D1Q6P9G0 228 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 CYP26C1Q6V0L0 522 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 PARP9Q8IXQ6 854 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 CAGE1Q8TC20 777 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 ANKRD24Q8TF21 1146 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 HDAC7Q8WUI4 952 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 JAKMIP2Q96AA8 810 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 CCDC51Q96ER9 411 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 OVOS2A0A0G2JMS6 1433 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 C4AP0C0L4 1744 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 C4BP0C0L5 1744 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 SYNRGQ9UMZ2 1314 aa8.07□□□□□ -1.12
NPHP1-203ENST00000393272 EME2A4GXA9 379 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms