RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 RPGRIP1Q96KN7 1286 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 ZSWIM6Q9HCJ5 1215 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 SAP30BPQ9UHR5 308 aaKnown RBP14.63□□□□□ -0.07
LCA5-202ENST00000392959 BACH1O14867 736 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 BRD3Q15059 726 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 CROCCP2Q86T23 111 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 VEZTQ9HBM0 779 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 SSX2IPQ9Y2D8 614 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 ZNF532Q9HCE3 1301 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 KLHL7Q8IXQ5 586 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 GLT8D2Q9H1C3 349 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 TSKSQ9UJT2 592 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 TPCN1Q9ULQ1 816 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 KLHL30Q0D2K2 578 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 FCHSD1Q86WN1 690 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 UBL4BQ8N7F7 174 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 FNBP1Q96RU3 617 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 FAM169AQ9Y6X4 670 aa14.62□□□□□ -0.07
LCA5-202ENST00000392959 A0A0D9SFI3 127 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 APBB1IPQ7Z5R6 666 aaPredicted RBP14.61□□□□□ -0.07
LCA5-202ENST00000392959 OR8K1Q8NGG5 319 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 EAF2Q96CJ1 260 aaPredicted RBP14.61□□□□□ -0.07
LCA5-202ENST00000392959 SLC52A2Q9HAB3 445 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 MKRN1Q9UHC7 482 aaKnown RBP14.61□□□□□ -0.07
LCA5-202ENST00000392959 SAR1BQ9Y6B6 198 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 B4DLN1 442 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 KRT5P13647 590 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 ARHGAP25P42331 645 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 IRX3P78415 501 aaPredicted RBP14.61□□□□□ -0.07
LCA5-202ENST00000392959 WDR44Q5JSH3 913 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 CEP128Q6ZU80 1094 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 DYMQ7RTS9 669 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 FLOT1O75955 427 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 RPS6KA1Q15418 735 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 DAAM2Q86T65 1068 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 ZNF496Q96IT1 587 aaPredicted RBP14.61□□□□□ -0.07
LCA5-202ENST00000392959 VPS54Q9P1Q0 977 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 RIMBP2O15034 1052 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 CALUO43852 315 aaPredicted RBP14.61□□□□□ -0.07
LCA5-202ENST00000392959 MAP7D1Q3KQU3 841 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 ZNF354CQ86Y25 554 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 STMN2Q93045 179 aa14.61□□□□□ -0.07
LCA5-202ENST00000392959 IFIH1Q9BYX4 1025 aaKnown RBP14.61□□□□□ -0.07
LCA5-202ENST00000392959 ERCC3P19447 782 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 SP4Q02446 784 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 RAB3IL1Q8TBN0 382 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 CCDC110Q8TBZ0 833 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 BLZF1Q9H2G9 400 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 CTTNBP2NLQ9P2B4 639 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 CFAP43Q8NDM7 1665 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 hCG_1642624A0A1W2PR95 340 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 STX10O60499 249 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 PFKFB2O60825 505 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 ARID4AP29374 1257 aaPredicted RBP14.6□□□□□ -0.07
LCA5-202ENST00000392959 ZSCAN26Q16670 478 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 GPIHBP1Q8IV16 184 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 FAM207AQ9NSI2 230 aaPredicted RBP14.6□□□□□ -0.07
LCA5-202ENST00000392959 NDC80O14777 642 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 TAF5LO75529 589 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 CMA1P23946 247 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 UAP1Q16222 522 aaPredicted RBP14.6□□□□□ -0.07
LCA5-202ENST00000392959 LRRC8AQ8IWT6 810 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 EYA3Q99504 573 aa14.6□□□□□ -0.07
LCA5-202ENST00000392959 WHAMMP3Q1A5X7 153 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 CABP7Q86V35 215 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 SPATA5Q8NB90 893 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 CHAMP1Q96JM3 812 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 GDAP1L1Q96MZ0 367 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 DESI2Q9BSY9 194 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 NUCKS1Q9H1E3 243 aaKnown RBP14.59□□□□□ -0.07
LCA5-202ENST00000392959 PKD2L1Q9P0L9 805 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 CHMP2AO43633 222 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 PSMC4P43686 418 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 EIF6P56537 245 aaKnown RBP14.59□□□□□ -0.07
LCA5-202ENST00000392959 ATP11AP98196 1134 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 CLUL1Q15846 466 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 CFAP157Q5JU67 520 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 NOSTRINQ8IVI9 506 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 IQCDQ96DY2 449 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 AATFQ9NY61 560 aaKnown RBP eCLIP14.59□□□□□ -0.07
LCA5-202ENST00000392959 ASIC3Q9UHC3 531 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 WDR62O43379 1518 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 NEURL1BA8MQ27 555 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 RGS12O14924 1447 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 SMTNP53814 917 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 SFMBT2Q5VUG0 894 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 RRAGAQ7L523 313 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 DDX41Q9UJV9 622 aaKnown RBP14.59□□□□□ -0.07
LCA5-202ENST00000392959 ANAPC4Q9UJX5 808 aa14.59□□□□□ -0.07
LCA5-202ENST00000392959 NCBP1Q09161 790 aaKnown RBP14.58□□□□□ -0.07
LCA5-202ENST00000392959 CCDC14Q49A88 953 aa14.58□□□□□ -0.07
LCA5-202ENST00000392959 PEX26Q7Z412 305 aa14.58□□□□□ -0.07
LCA5-202ENST00000392959 ZNF654Q8IZM8 581 aa14.58□□□□□ -0.07
LCA5-202ENST00000392959 TTC16Q8NEE8 873 aa14.58□□□□□ -0.07
LCA5-202ENST00000392959 MAK16Q9BXY0 300 aaKnown RBP14.58□□□□□ -0.07
LCA5-202ENST00000392959 NLRC4Q9NPP4 1024 aa14.58□□□□□ -0.07
LCA5-202ENST00000392959 KRT71Q3SY84 523 aa14.58□□□□□ -0.08
LCA5-202ENST00000392959 TYW1BQ6NUM6 668 aa14.58□□□□□ -0.08
LCA5-202ENST00000392959 PNMA8AQ86V59 439 aaPredicted RBP14.58□□□□□ -0.08
LCA5-202ENST00000392959 VSIG1Q86XK7 387 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms