RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 ZNF213O14771 459 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GNB5O14775 395 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MGST3O14880 152 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FSCN2O14926 492 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 EREGO14944 169 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 AURKAO14965 403 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 HNRNPDLO14979 420 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RIMBP2O15034 1052 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KHNYNO15037 678 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ERC2O15083 957 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MUSKO15146 869 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GPR182O15218 404 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RTL8CO15255 209 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ATXN7O15265 892 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FANCGO15287 622 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FOXN1O15353 648 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MEFVO15553 781 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SGSM2O43147 1006 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MAP3K7O43318 606 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 DHHO43323 396 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CBFA2T2O43439 604 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SUV39H1O43463 412 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KLF4O43474 513 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNQ2O43526 872 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SMAD6O43541 496 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FOXS1O43638 330 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KRT86O43790 486 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NRDCO43847 1150 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 AIREO43918 545 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ADCY3O60266 1144 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF500O60304 480 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PCDHGA12O60330 932 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TBC1D12O60347 775 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GRIN3BO60391 1043 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MAN1A2O60476 641 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 B4GALT3O60512 393 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PSPNO60542 156 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PEX10O60683 326 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LPXNO60711 386 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ICMTO60725 284 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MMP20O60882 483 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LRP3O75074 770 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 AOC2O75106 756 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ATG13O75143 517 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RNF40O75150 1001 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CNOT3O75175 753 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CILPO75339 1184 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 VAMP4O75379 141 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MOSPD3O75425 235 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MAFO75444 373 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PAGE1O75459 146 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NR1I2O75469 434 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LGR5O75473 907 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SRSF10O75494 262 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TNFRSF21O75509 655 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PRDM1O75626 825 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PAK3O75914 559 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 DNAJB5O75953 348 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SASH3O75995 380 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CDKL5O76039 1030 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 STC2O76061 302 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ECM2O94769 699 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 DDNO94850 711 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MICAL2O94851 1124 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FCHSD2O94868 740 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FARP2O94887 1054 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KLHL18O94889 574 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LRIG2O94898 1065 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 UBOX5O94941 541 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 WDR47O94967 919 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SOX30O94993 753 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PRSS23O95084 383 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZFPL1O95159 310 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF205O95201 554 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 EPN2O95208 641 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KAT7O95251 611 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ATE1O95260 518 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RASGRP1O95267 797 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TNFRSF6BO95407 300 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZIC2O95409 532 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FMNL1O95466 1100 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CNOT4O95628 575 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NTN1O95631 604 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NFATC1O95644 943 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PPP1R3DO95685 299 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TSPAN15O95858 294 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ONECUT2O95948 504 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TOP3BO95985 862 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TOMM40O96008 361 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 WNT11O96014 354 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 B3GALT4O96024 378 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ALDH1A1P00352 501 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PLGP00747 810 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PLATP00750 562 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CST3P01034 146 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KNG1P01042 644 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GNRH1P01148 92 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FSHBP01225 129 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 IGLV2-14P01704 120 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LMNAP02545 664 aaKnown RBP-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms