RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 NBPF6Q5VWK0 638 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 IGF2-ASQ6U949 168 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 NBPF5PQ86XG9 351 aaPredicted RBP3.18□□□□□ -1.9
TRAV41-201ENST00000390468 NME9Q86XW9 330 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 CERS3Q8IU89 383 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 EGFL6Q8IUX8 553 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 DTWD1Q8N5C7 304 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 IL22RA1Q8N6P7 574 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 ADAMTS19Q8TE59 1207 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 PBXIP1Q96AQ6 731 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 NBPF4Q96M43 638 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 NSUN5Q96P11 429 aaKnown RBP3.18□□□□□ -1.9
TRAV41-201ENST00000390468 UCN2Q96RP3 112 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 GZF1Q9H116 711 aaPredicted RBP3.18□□□□□ -1.9
TRAV41-201ENST00000390468 C19orf44Q9H6X5 657 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 GRPEL1Q9HAV7 217 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 BRMS1Q9HCU9 246 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 NUDCQ9Y266 331 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 BCS1LQ9Y276 419 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 MRVI1Q9Y6F6 885 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 NRAPQ86VF7 1730 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 AHDC1Q5TGY3 1603 aaPredicted RBP3.18□□□□□ -1.9
TRAV41-201ENST00000390468 ABCC6O95255 1503 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 TNS3Q68CZ2 1445 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 ZNF335Q9H4Z2 1342 aaPredicted RBP3.18□□□□□ -1.9
TRAV41-201ENST00000390468 MAPK8IP3Q9UPT6 1336 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 CASZ1Q86V15 1759 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 MYH3P11055 1940 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 PXDNQ92626 1479 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 RTL1A6NKG5 1358 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 FLT4P35916 1363 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 FSD2A1L4K1 749 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 U2SURPO15042 1029 aaKnown RBP3.17□□□□□ -1.9
TRAV41-201ENST00000390468 DIAPH1O60610 1272 aaKnown RBP3.17□□□□□ -1.9
TRAV41-201ENST00000390468 GHRHP01286 108 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 XRCC6P12956 609 aaKnown RBP eCLIP3.17□□□□□ -1.9
TRAV41-201ENST00000390468 TAL1P17542 331 aaPredicted RBP3.17□□□□□ -1.9
TRAV41-201ENST00000390468 LIG1P18858 919 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 GRNP28799 593 aaKnown RBP3.17□□□□□ -1.9
TRAV41-201ENST00000390468 MCM5P33992 734 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 KCNJ4P48050 445 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 ARSDP51689 593 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 GTF2A1P52655 376 aaPredicted RBP3.17□□□□□ -1.9
TRAV41-201ENST00000390468 SEC13P55735 322 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 HS1BP3Q53T59 392 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 TXNDC11Q6PKC3 985 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 FAM43BQ6ZT52 329 aaPredicted RBP3.17□□□□□ -1.9
TRAV41-201ENST00000390468 PLEKHM2Q8IWE5 1019 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 CCDC146Q8IYE0 955 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 RGL4Q8IZJ4 473 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 CMTR1Q8N1G2 835 aaKnown RBP3.17□□□□□ -1.9
TRAV41-201ENST00000390468 ABTB2Q8N961 1025 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 VTI1AQ96AJ9 217 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 PLD4Q96BZ4 506 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 IFT43Q96FT9 208 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 PAIP2Q9BPZ3 127 aaKnown RBP3.17□□□□□ -1.9
TRAV41-201ENST00000390468 SMC4Q9NTJ3 1288 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 BSDC1Q9NW68 430 aaPredicted RBP3.17□□□□□ -1.9
TRAV41-201ENST00000390468 FRRS1LQ9P0K9 344 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 R3HCC1Q9Y3T6 440 aaKnown RBP3.17□□□□□ -1.9
TRAV41-201ENST00000390468 RNF114Q9Y508 228 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 CEP83Q9Y592 693 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 OAS3Q9Y6K5 1087 aaKnown RBP3.17□□□□□ -1.9
TRAV41-201ENST00000390468 LTBP4Q8N2S1 1624 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 NPHP3Q7Z494 1330 aa3.17□□□□□ -1.9
TRAV41-201ENST00000390468 SBF2Q86WG5 1849 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 SBNO1A3KN83 1393 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 COL16A1Q07092 1604 aaPredicted RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 PNPLA6Q8IY17 1366 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 KRTAP4-8A0A0G2JLE6 195 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 F8W735 103 aaPredicted RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 M0R2N6 131 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 DLL1O00548 723 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 MICAL2O94851 1124 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 MED26O95402 600 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 CCDC172P0C7W6 258 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 U2AF1L5P0DN76 240 aaPredicted RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 YBX3P16989 372 aaKnown RBP eCLIP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 ARID4AP29374 1257 aaPredicted RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 CD97P48960 835 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 AMPHP49418 695 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 GP2P55259 537 aaKnown RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 RIPK4P57078 832 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 GPLD1P80108 840 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 U2AF1Q01081 240 aaKnown RBP eCLIP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 MAP2K1Q02750 393 aaPredicted RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 CHAF1AQ13111 956 aaPredicted RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 PDE3BQ13370 1112 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 RRS1Q15050 365 aaKnown RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 ZKSCAN8Q15776 578 aaPredicted RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 IER5Q5VY09 327 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 NUTM2GQ5VZR2 741 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 LARP1Q6PKG0 1096 aaKnown RBP3.16□□□□□ -1.9
TRAV41-201ENST00000390468 SIX5Q8N196 739 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 PDCL2Q8N4E4 241 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 NGEFQ8N5V2 710 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 KCNH5Q8NCM2 988 aa3.16□□□□□ -1.9
TRAV41-201ENST00000390468 TRPM4Q8TD43 1214 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms