RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 WDR18Q9BV38 432 aa8.68□□□□□ -1.02
TRAV27-201ENST00000390457 TBC1D2Q9BYX2 928 aa8.68□□□□□ -1.02
TRAV27-201ENST00000390457 DNAJC18Q9H819 358 aa8.68□□□□□ -1.02
TRAV27-201ENST00000390457 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.68□□□□□ -1.02
TRAV27-201ENST00000390457 METRNQ9UJH8 293 aa8.68□□□□□ -1.02
TRAV27-201ENST00000390457 PNMA3Q9UL41 463 aa8.68□□□□□ -1.02
TRAV27-201ENST00000390457 AKAP2Q9Y2D5 859 aa8.68□□□□□ -1.02
TRAV27-201ENST00000390457 RPTORQ8N122 1335 aa8.68□□□□□ -1.02
TRAV27-201ENST00000390457 USP17L5A8MUK1 530 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 SRGAP3O43295 1099 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 LDHCP07864 332 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 HOXA7P31268 230 aaPredicted RBP8.67□□□□□ -1.02
TRAV27-201ENST00000390457 MCAMP43121 646 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 PPP4CP60510 307 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 PLCB2Q00722 1185 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 EYSQ5T1H1 3165 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 NECAB2Q7Z6G3 386 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 SPATA5Q8NB90 893 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 USP6NLQ92738 828 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 ATAD5Q96QE3 1844 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 HERC5Q9UII4 1024 aaKnown RBP8.67□□□□□ -1.02
TRAV27-201ENST00000390457 OGDHLQ9ULD0 1010 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 CDH23Q9H251 3354 aa8.67□□□□□ -1.02
TRAV27-201ENST00000390457 PNMA6EA0A0J9YXQ4 647 aa8.66□□□□□ -1.02
TRAV27-201ENST00000390457 PEX10O60683 326 aa8.66□□□□□ -1.02
TRAV27-201ENST00000390457 GNAI3P08754 354 aa8.66□□□□□ -1.02
TRAV27-201ENST00000390457 XRCC5P13010 732 aaKnown RBP8.66□□□□□ -1.02
TRAV27-201ENST00000390457 BACE1P56817 501 aa8.66□□□□□ -1.02
TRAV27-201ENST00000390457 GSTO1P78417 241 aa8.66□□□□□ -1.02
TRAV27-201ENST00000390457 ASTLQ6HA08 431 aaPredicted RBP8.66□□□□□ -1.02
TRAV27-201ENST00000390457 GPR153Q6NV75 609 aa8.66□□□□□ -1.02
TRAV27-201ENST00000390457 SH3RF3Q8TEJ3 882 aaPredicted RBP8.66□□□□□ -1.02
TRAV27-201ENST00000390457 TRIB2Q92519 343 aa8.66□□□□□ -1.02
TRAV27-201ENST00000390457 PHF12Q96QT6 1004 aa8.66□□□□□ -1.02
TRAV27-201ENST00000390457 P2RX7Q99572 595 aaKnown RBP8.66□□□□□ -1.02
TRAV27-201ENST00000390457 TXNRD2Q9NNW7 524 aa8.66□□□□□ -1.02
TRAV27-201ENST00000390457 HMX1Q9NP08 348 aaPredicted RBP8.66□□□□□ -1.02
TRAV27-201ENST00000390457 PI4KBQ9UBF8 816 aa8.66□□□□□ -1.02
TRAV27-201ENST00000390457 RBPJLQ9UBG7 517 aa8.66□□□□□ -1.02
TRAV27-201ENST00000390457 PFASO15067 1338 aa8.65□□□□□ -1.02
TRAV27-201ENST00000390457 COL6A1P12109 1028 aa8.65□□□□□ -1.02
TRAV27-201ENST00000390457 PABPC4Q13310 644 aaKnown RBP eCLIP8.65□□□□□ -1.02
TRAV27-201ENST00000390457 SHROOM1Q2M3G4 852 aaPredicted RBP8.65□□□□□ -1.02
TRAV27-201ENST00000390457 Q3C1V9 767 aa8.65□□□□□ -1.02
TRAV27-201ENST00000390457 LRIT3Q3SXY7 679 aa8.65□□□□□ -1.02
TRAV27-201ENST00000390457 LCE2DQ5TA82 110 aaPredicted RBP8.65□□□□□ -1.02
TRAV27-201ENST00000390457 ADGRA1Q86SQ6 560 aa8.65□□□□□ -1.02
TRAV27-201ENST00000390457 HOMEZQ8IX15 550 aa8.65□□□□□ -1.02
TRAV27-201ENST00000390457 TEX11Q8IYF3 940 aa8.65□□□□□ -1.02
TRAV27-201ENST00000390457 NEUROD6Q96NK8 337 aa8.65□□□□□ -1.02
TRAV27-201ENST00000390457 NBPF3Q9H094 633 aa8.65□□□□□ -1.02
TRAV27-201ENST00000390457 DHX36Q9H2U1 1008 aaKnown RBP8.65□□□□□ -1.02
TRAV27-201ENST00000390457 GPR108Q9NPR9 543 aa8.65□□□□□ -1.02
TRAV27-201ENST00000390457 RAI14Q9P0K7 980 aa8.65□□□□□ -1.02
TRAV27-201ENST00000390457 CDK5RAP2Q96SN8 1893 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 DDX60LQ5H9U9 1706 aaKnown RBP8.64□□□□□ -1.03
TRAV27-201ENST00000390457 C19orf81C9J6K1 198 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 TULP1O00294 542 aaPredicted RBP8.64□□□□□ -1.03
TRAV27-201ENST00000390457 CYP2E1P05181 493 aaPredicted RBP8.64□□□□□ -1.03
TRAV27-201ENST00000390457 ASNSP08243 561 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 UQCRFS1P1P0C7P4 283 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 TRIM27P14373 513 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 HERVK_113P62684 666 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 MTMR2Q13614 643 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 MORN1Q5T089 497 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 FOXP4Q8IVH2 680 aaPredicted RBP8.64□□□□□ -1.03
TRAV27-201ENST00000390457 SLC17A8Q8NDX2 589 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 ZNF512BQ96KM6 892 aaPredicted RBP8.64□□□□□ -1.03
TRAV27-201ENST00000390457 AS3MTQ9HBK9 375 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 SCUBE2Q9NQ36 999 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 EMILIN3Q9NT22 766 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 GINM1Q9NU53 330 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 ZMYND8Q9ULU4 1186 aaPredicted RBP8.64□□□□□ -1.03
TRAV27-201ENST00000390457 TNNQ9UQP3 1299 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 MYO5AQ9Y4I1 1855 aaKnown RBP8.64□□□□□ -1.03
TRAV27-201ENST00000390457 FOCADQ5VW36 1801 aa8.64□□□□□ -1.03
TRAV27-201ENST00000390457 FLT1P17948 1338 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 USP17L10C9JJH3 530 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 DLL1O00548 723 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 IGSF3O75054 1194 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 IGHA2P01877 340 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 GNAI2P04899 355 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 CYP2B6P20813 491 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 MAGEA10P43363 369 aaPredicted RBP8.63□□□□□ -1.03
TRAV27-201ENST00000390457 IRX3P78415 501 aaPredicted RBP8.63□□□□□ -1.03
TRAV27-201ENST00000390457 CACNB2Q08289 660 aaPredicted RBP8.63□□□□□ -1.03
TRAV27-201ENST00000390457 C7orf61Q8IZ16 206 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 GPRC5AQ8NFJ5 357 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 TGFBRAP1Q8WUH2 860 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 NUDT12Q9BQG2 462 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 DBNDD2Q9BQY9 259 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 PORCNQ9H237 461 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 C11orf49Q9H6J7 331 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 SNRKQ9NRH2 765 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 AATFQ9NY61 560 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRAV27-201ENST00000390457 LRP2BPQ9P2M1 347 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 ZBTB21Q9ULJ3 1066 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 MUC3AQ02505 3323 aa8.63□□□□□ -1.03
TRAV27-201ENST00000390457 CNMDO75829 334 aa8.62□□□□□ -1.03
TRAV27-201ENST00000390457 BAG3O95817 575 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms