RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 NUDT12Q9BQG2 462 aa10.99□□□□□ -0.65
TRAV20-201ENST00000390448 PAGR1Q9BTK6 254 aa10.99□□□□□ -0.65
TRAV20-201ENST00000390448 CCDC8Q9H0W5 538 aaPredicted RBP10.99□□□□□ -0.65
TRAV20-201ENST00000390448 GINM1Q9NU53 330 aa10.99□□□□□ -0.65
TRAV20-201ENST00000390448 SZT2Q5T011 3432 aa10.99□□□□□ -0.65
TRAV20-201ENST00000390448 FLT1P17948 1338 aa10.99□□□□□ -0.65
TRAV20-201ENST00000390448 MGAMO43451 1857 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 IGSF3O75054 1194 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 MAPK4P31152 587 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 HOXA7P31268 230 aaPredicted RBP10.98□□□□□ -0.65
TRAV20-201ENST00000390448 HERVK_113P62684 666 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 DYNLL1P63167 89 aaKnown RBP10.98□□□□□ -0.65
TRAV20-201ENST00000390448 POLA2Q14181 598 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 USP17L2Q6R6M4 530 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 ADGRA1Q86SQ6 560 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 CERS3Q8IU89 383 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 C7orf61Q8IZ16 206 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 ANKLE1Q8NAG6 615 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 MIGA1Q8NAN2 632 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 SSH3Q8TE77 659 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 SOCS4Q8WXH5 440 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 ZNF512BQ96KM6 892 aaPredicted RBP10.98□□□□□ -0.65
TRAV20-201ENST00000390448 NBPF3Q9H094 633 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 CRISPLD2Q9H0B8 497 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 PIH1D3Q9NQM4 214 aaKnown RBP10.98□□□□□ -0.65
TRAV20-201ENST00000390448 MORF4L1Q9UBU8 362 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 STAP2Q9UGK3 403 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 GJD2Q9UKL4 321 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 ZBTB21Q9ULJ3 1066 aa10.98□□□□□ -0.65
TRAV20-201ENST00000390448 GLRX3O76003 335 aaKnown RBP10.97□□□□□ -0.65
TRAV20-201ENST00000390448 GH2P01242 217 aa10.97□□□□□ -0.65
TRAV20-201ENST00000390448 PRKAR2AP13861 404 aaKnown RBP10.97□□□□□ -0.65
TRAV20-201ENST00000390448 ZKSCAN1P17029 563 aaPredicted RBP10.97□□□□□ -0.65
TRAV20-201ENST00000390448 HNRNPUQ00839 825 aaKnown RBP eCLIP10.97□□□□□ -0.65
TRAV20-201ENST00000390448 MAP3K12Q12852 859 aa10.97□□□□□ -0.65
TRAV20-201ENST00000390448 RAB3GAP1Q15042 981 aa10.97□□□□□ -0.65
TRAV20-201ENST00000390448 ZYXQ15942 572 aaKnown RBP10.97□□□□□ -0.65
TRAV20-201ENST00000390448 WDR78Q5VTH9 848 aa10.97□□□□□ -0.65
TRAV20-201ENST00000390448 TRMT44Q8IYL2 757 aaKnown RBP10.97□□□□□ -0.65
TRAV20-201ENST00000390448 MAGEB6Q8N7X4 407 aa10.97□□□□□ -0.65
TRAV20-201ENST00000390448 DIS3LQ8TF46 1054 aaKnown RBP10.97□□□□□ -0.65
TRAV20-201ENST00000390448 GTF3C2Q8WUA4 911 aaPredicted RBP10.97□□□□□ -0.65
TRAV20-201ENST00000390448 BCL11AQ9H165 835 aa10.97□□□□□ -0.65
TRAV20-201ENST00000390448 C11orf49Q9H6J7 331 aa10.97□□□□□ -0.65
TRAV20-201ENST00000390448 CABP5Q9NP86 173 aa10.97□□□□□ -0.65
TRAV20-201ENST00000390448 DBNLQ9UJU6 430 aaKnown RBP10.97□□□□□ -0.65
TRAV20-201ENST00000390448 A0A1W2PPC1 479 aa10.96□□□□□ -0.65
TRAV20-201ENST00000390448 RGS2P41220 211 aa10.96□□□□□ -0.65
TRAV20-201ENST00000390448 CCNA1P78396 465 aa10.96□□□□□ -0.65
TRAV20-201ENST00000390448 JAG1P78504 1218 aa10.96□□□□□ -0.65
TRAV20-201ENST00000390448 TRIM32Q13049 653 aa10.96□□□□□ -0.65
TRAV20-201ENST00000390448 TTC6Q86TZ1 520 aa10.96□□□□□ -0.65
TRAV20-201ENST00000390448 ERC1Q8IUD2 1116 aa10.96□□□□□ -0.65
TRAV20-201ENST00000390448 TRIB2Q92519 343 aa10.96□□□□□ -0.65
TRAV20-201ENST00000390448 TLR7Q9NYK1 1049 aaKnown RBP10.96□□□□□ -0.65
TRAV20-201ENST00000390448 SERPINB13Q9UIV8 391 aa10.96□□□□□ -0.65
TRAV20-201ENST00000390448 ZMYND8Q9ULU4 1186 aaPredicted RBP10.96□□□□□ -0.65
TRAV20-201ENST00000390448 USP17L15C9J2P7 530 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 USP17L13C9JLJ4 530 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 USP17L11C9JVI0 530 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 USP17L18D6R9N7 530 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 USP17L22D6RA61 530 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 USP17L17D6RBQ6 530 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 USP17L19D6RCP7 530 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 USP17L20D6RJB6 530 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 PEX10O60683 326 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 POLR3DP05423 398 aaPredicted RBP10.95□□□□□ -0.66
TRAV20-201ENST00000390448 XRCC5P13010 732 aaKnown RBP10.95□□□□□ -0.66
TRAV20-201ENST00000390448 USP14P54578 494 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 ERVK-9P63128 1117 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 ERVK-24P63145 666 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 USP17L24Q0WX57 530 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 ABCB5Q2M3G0 1257 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 SHROOM1Q2M3G4 852 aaPredicted RBP10.95□□□□□ -0.66
TRAV20-201ENST00000390448 CERKLQ49MI3 558 aaPredicted RBP10.95□□□□□ -0.66
TRAV20-201ENST00000390448 PLEKHH3Q7Z736 793 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 AACSQ86V21 672 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 METTL16Q86W50 562 aaKnown RBP10.95□□□□□ -0.66
TRAV20-201ENST00000390448 EAF2Q96CJ1 260 aaPredicted RBP10.95□□□□□ -0.66
TRAV20-201ENST00000390448 DNAJC18Q9H819 358 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 TXNRD2Q9NNW7 524 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 EMILIN3Q9NT22 766 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 RBPJLQ9UBG7 517 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 NOP58Q9Y2X3 529 aaKnown RBP10.95□□□□□ -0.66
TRAV20-201ENST00000390448 PTPRFP10586 1907 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 PHIPQ8WWQ0 1821 aa10.95□□□□□ -0.66
TRAV20-201ENST00000390448 MPHOSPH10O00566 681 aaKnown RBP10.94□□□□□ -0.66
TRAV20-201ENST00000390448 Q3C1V9 767 aa10.94□□□□□ -0.66
TRAV20-201ENST00000390448 HSP90AB4PQ58FF6 505 aa10.94□□□□□ -0.66
TRAV20-201ENST00000390448 GPR142Q7Z601 462 aa10.94□□□□□ -0.66
TRAV20-201ENST00000390448 EDC3Q96F86 508 aaKnown RBP10.94□□□□□ -0.66
TRAV20-201ENST00000390448 PRO3102Q9H379 93 aa10.94□□□□□ -0.66
TRAV20-201ENST00000390448 OGDHLQ9ULD0 1010 aa10.94□□□□□ -0.66
TRAV20-201ENST00000390448 EXOC6BQ9Y2D4 811 aa10.94□□□□□ -0.66
TRAV20-201ENST00000390448 RABGAP1Q9Y3P9 1069 aa10.94□□□□□ -0.66
TRAV20-201ENST00000390448 NDUFB9Q9Y6M9 179 aa10.94□□□□□ -0.66
TRAV20-201ENST00000390448 IVNS1ABPQ9Y6Y0 642 aa10.94□□□□□ -0.66
TRAV20-201ENST00000390448 DOCK3Q8IZD9 2030 aa10.93□□□□□ -0.66
TRAV20-201ENST00000390448 MAGEB6P1A0A0J9YX57 407 aa10.93□□□□□ -0.66
TRAV20-201ENST00000390448 APBB1O00213 710 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms