RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 HLA-DOAP06340 250 aa11.93□□□□□ -0.5
TRAV13-2-201ENST00000390439 ARID4AP29374 1257 aaPredicted RBP11.93□□□□□ -0.5
TRAV13-2-201ENST00000390439 MTX1Q13505 466 aa11.93□□□□□ -0.5
TRAV13-2-201ENST00000390439 MAP3K21Q5TCX8 1036 aa11.93□□□□□ -0.5
TRAV13-2-201ENST00000390439 NAA16Q6N069 864 aaPredicted RBP11.93□□□□□ -0.5
TRAV13-2-201ENST00000390439 SH3RF3Q8TEJ3 882 aaPredicted RBP11.93□□□□□ -0.5
TRAV13-2-201ENST00000390439 ZNF384Q8TF68 577 aa11.93□□□□□ -0.5
TRAV13-2-201ENST00000390439 ARHGAP45Q92619 1136 aa11.93□□□□□ -0.5
TRAV13-2-201ENST00000390439 MTMR10Q9NXD2 777 aa11.93□□□□□ -0.5
TRAV13-2-201ENST00000390439 A0A0C4DFX4 3053 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 IGSF3O75054 1194 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 PPP4CP60510 307 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 ERVK-9P63128 1117 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 ERVK-24P63145 666 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 CCNA1P78396 465 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 CACNB2Q08289 660 aaPredicted RBP11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 RRP1BQ14684 758 aaKnown RBP11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 CCDC158Q5M9N0 1113 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 MFSD14CQ5VZR4 134 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 USP17L2Q6R6M4 530 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 PI16Q6UXB8 463 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 Q7L0L9 218 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 PLEKHH3Q7Z736 793 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 TGFBRAP1Q8WUH2 860 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 CDCA7LQ96GN5 454 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 LBHD1Q9BQE6 289 aaPredicted RBP11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 PTPRFP10586 1907 aa11.92□□□□□ -0.5
TRAV13-2-201ENST00000390439 GNAI2P04899 355 aa11.91□□□□□ -0.5
TRAV13-2-201ENST00000390439 MCAMP43121 646 aa11.91□□□□□ -0.5
TRAV13-2-201ENST00000390439 TTC39AQ5SRH9 613 aa11.91□□□□□ -0.5
TRAV13-2-201ENST00000390439 GPR142Q7Z601 462 aa11.91□□□□□ -0.5
TRAV13-2-201ENST00000390439 MAPKAPK5Q8IW41 473 aa11.91□□□□□ -0.5
TRAV13-2-201ENST00000390439 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
TRAV13-2-201ENST00000390439 APBA2Q99767 749 aa11.91□□□□□ -0.5
TRAV13-2-201ENST00000390439 PAGR1Q9BTK6 254 aa11.91□□□□□ -0.5
TRAV13-2-201ENST00000390439 TXNRD2Q9NNW7 524 aa11.91□□□□□ -0.5
TRAV13-2-201ENST00000390439 AATFQ9NY61 560 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRAV13-2-201ENST00000390439 RBPJLQ9UBG7 517 aa11.91□□□□□ -0.5
TRAV13-2-201ENST00000390439 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 PFASO15067 1338 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 MSCO60682 206 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 GDF11O95390 407 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 COL6A1P12109 1028 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 Q3C1V9 767 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 MORN1Q5T089 497 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 METTL16Q86W50 562 aaKnown RBP11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 CERS3Q8IU89 383 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 USP6NLQ92738 828 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 EDC3Q96F86 508 aaKnown RBP11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 PRKAG2Q9UGJ0 569 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 ZBTB21Q9ULJ3 1066 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 RABGAP1Q9Y3P9 1069 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 IVNS1ABPQ9Y6Y0 642 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 LAMA3Q16787 3333 aa11.9□□□□□ -0.5
TRAV13-2-201ENST00000390439 USP17L15C9J2P7 530 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 USP17L13C9JLJ4 530 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 USP17L11C9JVI0 530 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 USP17L18D6R9N7 530 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 USP17L22D6RA61 530 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 USP17L17D6RBQ6 530 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 USP17L19D6RCP7 530 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 USP17L20D6RJB6 530 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 CCND3P30281 292 aaPredicted RBP11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 RARSP54136 660 aaKnown RBP11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 USP14P54578 494 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 MDM2Q00987 491 aaPredicted RBP11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 ATP2B2Q01814 1243 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 USP17L24Q0WX57 530 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 MAP2K5Q13163 448 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 OS9Q13438 667 aaPredicted RBP11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 WDR78Q5VTH9 848 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 LHX8Q68G74 356 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 FEZ1Q99689 392 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 GPR108Q9NPR9 543 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 SNRKQ9NRH2 765 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 PALD1Q9ULE6 856 aa11.89□□□□□ -0.51
TRAV13-2-201ENST00000390439 FLT1P17948 1338 aa11.88□□□□□ -0.51
TRAV13-2-201ENST00000390439 SLC15A5A6NIM6 579 aa11.88□□□□□ -0.51
TRAV13-2-201ENST00000390439 PEX10O60683 326 aa11.88□□□□□ -0.51
TRAV13-2-201ENST00000390439 LRRC26Q2I0M4 334 aa11.88□□□□□ -0.51
TRAV13-2-201ENST00000390439 FAM109BQ6ICB4 259 aaPredicted RBP11.88□□□□□ -0.51
TRAV13-2-201ENST00000390439 SENP6Q9GZR1 1112 aaPredicted RBP11.88□□□□□ -0.51
TRAV13-2-201ENST00000390439 PORCNQ9H237 461 aa11.88□□□□□ -0.51
TRAV13-2-201ENST00000390439 EMILIN3Q9NT22 766 aa11.88□□□□□ -0.51
TRAV13-2-201ENST00000390439 SAP30BPQ9UHR5 308 aaKnown RBP11.88□□□□□ -0.51
TRAV13-2-201ENST00000390439 LOC285556D6RIA3 1793 aa11.87□□□□□ -0.51
TRAV13-2-201ENST00000390439 GH2P01242 217 aa11.87□□□□□ -0.51
TRAV13-2-201ENST00000390439 CNGA1P29973 690 aa11.87□□□□□ -0.51
TRAV13-2-201ENST00000390439 USP5P45974 858 aa11.87□□□□□ -0.51
TRAV13-2-201ENST00000390439 JAG1P78504 1218 aa11.87□□□□□ -0.51
TRAV13-2-201ENST00000390439 CCL14Q16627 93 aa11.87□□□□□ -0.51
TRAV13-2-201ENST00000390439 DNAJC18Q9H819 358 aa11.87□□□□□ -0.51
TRAV13-2-201ENST00000390439 CABP5Q9NP86 173 aa11.87□□□□□ -0.51
TRAV13-2-201ENST00000390439 DDX20Q9UHI6 824 aaKnown RBP11.87□□□□□ -0.51
TRAV13-2-201ENST00000390439 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.87□□□□□ -0.51
TRAV13-2-201ENST00000390439 COL6A3P12111 3177 aa11.87□□□□□ -0.51
TRAV13-2-201ENST00000390439 CYP2E1P05181 493 aaPredicted RBP11.86□□□□□ -0.51
TRAV13-2-201ENST00000390439 CYP7A1P22680 504 aa11.86□□□□□ -0.51
TRAV13-2-201ENST00000390439 PTPREP23469 700 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms