RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 ASNSP08243 561 aa13.5□□□□□ -0.25
TRAV3-201ENST00000390425 CYP7A1P22680 504 aa13.5□□□□□ -0.25
TRAV3-201ENST00000390425 GCLCP48506 637 aaPredicted RBP13.5□□□□□ -0.25
TRAV3-201ENST00000390425 FXR1P51114 621 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRAV3-201ENST00000390425 BACE1P56817 501 aa13.5□□□□□ -0.25
TRAV3-201ENST00000390425 MIGA1Q8NAN2 632 aa13.5□□□□□ -0.25
TRAV3-201ENST00000390425 NKX2-3Q8TAU0 364 aa13.5□□□□□ -0.25
TRAV3-201ENST00000390425 AS3MTQ9HBK9 375 aa13.5□□□□□ -0.25
TRAV3-201ENST00000390425 ZBTB21Q9ULJ3 1066 aa13.5□□□□□ -0.25
TRAV3-201ENST00000390425 COLQQ9Y215 455 aaPredicted RBP13.5□□□□□ -0.25
TRAV3-201ENST00000390425 RLFQ13129 1914 aa13.49□□□□□ -0.25
TRAV3-201ENST00000390425 LAMA3Q16787 3333 aa13.49□□□□□ -0.25
TRAV3-201ENST00000390425 PEX10O60683 326 aa13.49□□□□□ -0.25
TRAV3-201ENST00000390425 IGSF3O75054 1194 aa13.49□□□□□ -0.25
TRAV3-201ENST00000390425 IDH1O75874 414 aaKnown RBP13.49□□□□□ -0.25
TRAV3-201ENST00000390425 FOXP4Q8IVH2 680 aaPredicted RBP13.49□□□□□ -0.25
TRAV3-201ENST00000390425 PAK6Q9NQU5 681 aaPredicted RBP13.49□□□□□ -0.25
TRAV3-201ENST00000390425 MORF4L1Q9UBU8 362 aa13.49□□□□□ -0.25
TRAV3-201ENST00000390425 PARP14Q460N5 1801 aa13.48□□□□□ -0.25
TRAV3-201ENST00000390425 FARP2O94887 1054 aaPredicted RBP13.48□□□□□ -0.25
TRAV3-201ENST00000390425 SGPL1O95470 568 aa13.48□□□□□ -0.25
TRAV3-201ENST00000390425 HOXA7P31268 230 aaPredicted RBP13.48□□□□□ -0.25
TRAV3-201ENST00000390425 PABPC4Q13310 644 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAV3-201ENST00000390425 DIEXFQ68CQ4 756 aaKnown RBP13.48□□□□□ -0.25
TRAV3-201ENST00000390425 POTEEQ6S8J3 1075 aa13.48□□□□□ -0.25
TRAV3-201ENST00000390425 AACSQ86V21 672 aa13.48□□□□□ -0.25
TRAV3-201ENST00000390425 CRACR2BQ8N4Y2 399 aaPredicted RBP13.48□□□□□ -0.25
TRAV3-201ENST00000390425 MAGEB6Q8N7X4 407 aa13.48□□□□□ -0.25
TRAV3-201ENST00000390425 COA7Q96BR5 231 aa13.48□□□□□ -0.25
TRAV3-201ENST00000390425 DEFB118Q96PH6 123 aa13.48□□□□□ -0.25
TRAV3-201ENST00000390425 TXNRD2Q9NNW7 524 aa13.48□□□□□ -0.25
TRAV3-201ENST00000390425 GJD2Q9UKL4 321 aa13.48□□□□□ -0.25
TRAV3-201ENST00000390425 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
TRAV3-201ENST00000390425 A0A0G2JMZ2 1700 aa13.47□□□□□ -0.25
TRAV3-201ENST00000390425 P2RX7Q99572 595 aaKnown RBP13.47□□□□□ -0.25
TRAV3-201ENST00000390425 RIOK1Q9BRS2 568 aaKnown RBP13.47□□□□□ -0.25
TRAV3-201ENST00000390425 CRISPLD2Q9H0B8 497 aa13.47□□□□□ -0.25
TRAV3-201ENST00000390425 IL1RAPL2Q9NP60 686 aa13.47□□□□□ -0.25
TRAV3-201ENST00000390425 USP17L10C9JJH3 530 aa13.46□□□□□ -0.25
TRAV3-201ENST00000390425 HLA-DOAP06340 250 aa13.46□□□□□ -0.25
TRAV3-201ENST00000390425 HERVK_113P62684 666 aa13.46□□□□□ -0.25
TRAV3-201ENST00000390425 IRX3P78415 501 aaPredicted RBP13.46□□□□□ -0.25
TRAV3-201ENST00000390425 EVX2Q03828 476 aa13.46□□□□□ -0.25
TRAV3-201ENST00000390425 TRIM32Q13049 653 aa13.46□□□□□ -0.25
TRAV3-201ENST00000390425 TATDN1Q6P1N9 297 aa13.46□□□□□ -0.25
TRAV3-201ENST00000390425 SIRT2Q8IXJ6 389 aa13.46□□□□□ -0.25
TRAV3-201ENST00000390425 RHPN1Q8TCX5 695 aa13.46□□□□□ -0.25
TRAV3-201ENST00000390425 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.46□□□□□ -0.25
TRAV3-201ENST00000390425 EHD4Q9H223 541 aa13.46□□□□□ -0.25
TRAV3-201ENST00000390425 EMILIN3Q9NT22 766 aa13.46□□□□□ -0.25
TRAV3-201ENST00000390425 GINM1Q9NU53 330 aa13.46□□□□□ -0.25
TRAV3-201ENST00000390425 TMOD4Q9NZQ9 345 aa13.46□□□□□ -0.25
TRAV3-201ENST00000390425 C19orf81C9J6K1 198 aa13.45□□□□□ -0.26
TRAV3-201ENST00000390425 GH2P01242 217 aa13.45□□□□□ -0.26
TRAV3-201ENST00000390425 HMGCRP04035 888 aa13.45□□□□□ -0.26
TRAV3-201ENST00000390425 MAP3K12Q12852 859 aa13.45□□□□□ -0.26
TRAV3-201ENST00000390425 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
TRAV3-201ENST00000390425 ERC1Q8IUD2 1116 aa13.45□□□□□ -0.26
TRAV3-201ENST00000390425 TRIB2Q92519 343 aa13.45□□□□□ -0.26
TRAV3-201ENST00000390425 DPF3Q92784 378 aa13.45□□□□□ -0.26
TRAV3-201ENST00000390425 TRIM34Q9BYJ4 488 aa13.45□□□□□ -0.26
TRAV3-201ENST00000390425 PRO3102Q9H379 93 aa13.45□□□□□ -0.26
TRAV3-201ENST00000390425 SHMT1P34896 483 aa13.44□□□□□ -0.26
TRAV3-201ENST00000390425 USP5P45974 858 aa13.44□□□□□ -0.26
TRAV3-201ENST00000390425 PLCD1P51178 756 aa13.44□□□□□ -0.26
TRAV3-201ENST00000390425 DIS3LQ8TF46 1054 aaKnown RBP13.44□□□□□ -0.26
TRAV3-201ENST00000390425 C12orf42Q96LP6 360 aa13.44□□□□□ -0.26
TRAV3-201ENST00000390425 HTATIP2Q9BUP3 242 aa13.44□□□□□ -0.26
TRAV3-201ENST00000390425 PORCNQ9H237 461 aa13.44□□□□□ -0.26
TRAV3-201ENST00000390425 RBPJLQ9UBG7 517 aa13.44□□□□□ -0.26
TRAV3-201ENST00000390425 SERPINB13Q9UIV8 391 aa13.44□□□□□ -0.26
TRAV3-201ENST00000390425 COL11A1P12107 1806 aaPredicted RBP13.43□□□□□ -0.26
TRAV3-201ENST00000390425 PDE6AP16499 860 aa13.43□□□□□ -0.26
TRAV3-201ENST00000390425 GUCY1A2P33402 732 aa13.43□□□□□ -0.26
TRAV3-201ENST00000390425 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
TRAV3-201ENST00000390425 ERVK-9P63128 1117 aa13.43□□□□□ -0.26
TRAV3-201ENST00000390425 ERVK-24P63145 666 aa13.43□□□□□ -0.26
TRAV3-201ENST00000390425 Q3C1V9 767 aa13.43□□□□□ -0.26
TRAV3-201ENST00000390425 MAP3K21Q5TCX8 1036 aa13.43□□□□□ -0.26
TRAV3-201ENST00000390425 CERS3Q8IU89 383 aa13.43□□□□□ -0.26
TRAV3-201ENST00000390425 ZBTB40Q9NUA8 1239 aa13.43□□□□□ -0.26
TRAV3-201ENST00000390425 RBM27Q9P2N5 1060 aaKnown RBP13.43□□□□□ -0.26
TRAV3-201ENST00000390425 ZNF236Q9UL36 1845 aa13.43□□□□□ -0.26
TRAV3-201ENST00000390425 TCRBV5S4A2TA0A5A2 114 aa13.42□□□□□ -0.26
TRAV3-201ENST00000390425 CNMDO75829 334 aa13.42□□□□□ -0.26
TRAV3-201ENST00000390425 CYP2B6P20813 491 aa13.42□□□□□ -0.26
TRAV3-201ENST00000390425 GABPAQ06546 454 aa13.42□□□□□ -0.26
TRAV3-201ENST00000390425 ZYXQ15942 572 aaKnown RBP13.42□□□□□ -0.26
TRAV3-201ENST00000390425 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
TRAV3-201ENST00000390425 TMED8Q6PL24 325 aaPredicted RBP13.42□□□□□ -0.26
TRAV3-201ENST00000390425 USP17L2Q6R6M4 530 aa13.42□□□□□ -0.26
TRAV3-201ENST00000390425 GPRC5AQ8NFJ5 357 aa13.42□□□□□ -0.26
TRAV3-201ENST00000390425 ACER1Q8TDN7 264 aa13.42□□□□□ -0.26
TRAV3-201ENST00000390425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRAV3-201ENST00000390425 USP6NLQ92738 828 aa13.42□□□□□ -0.26
TRAV3-201ENST00000390425 KIF1BPQ96EK5 621 aa13.42□□□□□ -0.26
TRAV3-201ENST00000390425 EDC3Q96F86 508 aaKnown RBP13.42□□□□□ -0.26
TRAV3-201ENST00000390425 PAWRQ96IZ0 340 aaKnown RBP13.42□□□□□ -0.26
TRAV3-201ENST00000390425 PAGR1Q9BTK6 254 aa13.42□□□□□ -0.26
TRAV3-201ENST00000390425 COG6Q9Y2V7 657 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms