RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 TGFBRAP1Q8WUH2 860 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 MRPS27Q92552 414 aaKnown RBP21.07■□□□□ 0.96
ACTN4-202ENST00000390009 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.07■□□□□ 0.96
ACTN4-202ENST00000390009 RNF26Q9BY78 433 aaPredicted RBP21.07■□□□□ 0.96
ACTN4-202ENST00000390009 PARP3Q9Y6F1 533 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 MRVI1Q9Y6F6 885 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 RGPD3A6NKT7 1758 aaPredicted RBP21.06■□□□□ 0.96
ACTN4-202ENST00000390009 RGPD4Q7Z3J3 1758 aa21.06■□□□□ 0.96
ACTN4-202ENST00000390009 TSPY2A6NKD2 308 aa21.06■□□□□ 0.96
ACTN4-202ENST00000390009 DDAH1O94760 285 aa21.06■□□□□ 0.96
ACTN4-202ENST00000390009 CERS3Q8IU89 383 aa21.06■□□□□ 0.96
ACTN4-202ENST00000390009 TBC1D22AQ8WUA7 517 aa21.06■□□□□ 0.96
ACTN4-202ENST00000390009 PDE6BP35913 854 aa21.05■□□□□ 0.96
ACTN4-202ENST00000390009 BTDP43251 543 aa21.05■□□□□ 0.96
ACTN4-202ENST00000390009 RBM28Q9NW13 759 aaKnown RBP21.05■□□□□ 0.96
ACTN4-202ENST00000390009 ROBO3Q96MS0 1386 aa21.05■□□□□ 0.96
ACTN4-202ENST00000390009 GPR75-ASB3A0A0A6YYF3 556 aa21.05■□□□□ 0.96
ACTN4-202ENST00000390009 ESPNB1AK53 854 aa21.05■□□□□ 0.96
ACTN4-202ENST00000390009 KINO60870 393 aaKnown RBP21.05■□□□□ 0.96
ACTN4-202ENST00000390009 SAFBQ15424 915 aaKnown RBP eCLIP21.05■□□□□ 0.964e-6■■■■□ 22.6
ACTN4-202ENST00000390009 AMOTL1Q8IY63 956 aa21.05■□□□□ 0.96
ACTN4-202ENST00000390009 USP25Q9UHP3 1055 aa21.05■□□□□ 0.96
ACTN4-202ENST00000390009 KCNJ14Q9UNX9 436 aa21.05■□□□□ 0.96
ACTN4-202ENST00000390009 FAM205AQ6ZU69 1335 aa21.04■□□□□ 0.96
ACTN4-202ENST00000390009 RIMBP2O15034 1052 aa21.04■□□□□ 0.96
ACTN4-202ENST00000390009 CTAGE5O15320 804 aa21.04■□□□□ 0.96
ACTN4-202ENST00000390009 ALDH1B1P30837 517 aa21.04■□□□□ 0.96
ACTN4-202ENST00000390009 SLC39A14Q15043 492 aa21.04■□□□□ 0.96
ACTN4-202ENST00000390009 AKAP17AQ02040 695 aaKnown RBP21.04■□□□□ 0.96
ACTN4-202ENST00000390009 FUT2Q10981 343 aa21.04■□□□□ 0.96
ACTN4-202ENST00000390009 SASS6Q6UVJ0 657 aa21.04■□□□□ 0.96
ACTN4-202ENST00000390009 NOSTRINQ8IVI9 506 aa21.04■□□□□ 0.96
ACTN4-202ENST00000390009 MAPKAPK5Q8IW41 473 aa21.04■□□□□ 0.96
ACTN4-202ENST00000390009 DIS3L2Q8IYB7 885 aaKnown RBP21.04■□□□□ 0.96
ACTN4-202ENST00000390009 FMR1NBQ8N0W7 255 aaPredicted RBP21.04■□□□□ 0.96
ACTN4-202ENST00000390009 FAM200AQ8TCP9 573 aa21.04■□□□□ 0.96
ACTN4-202ENST00000390009 DYNLL2Q96FJ2 89 aa21.04■□□□□ 0.96
ACTN4-202ENST00000390009 DDX60LQ5H9U9 1706 aaKnown RBP21.03■□□□□ 0.96
ACTN4-202ENST00000390009 MYH1P12882 1939 aa21.03■□□□□ 0.96
ACTN4-202ENST00000390009 A0A1B0GVL5 298 aa21.03■□□□□ 0.96
ACTN4-202ENST00000390009 BTBD18B2RXH4 712 aa21.03■□□□□ 0.96
ACTN4-202ENST00000390009 PLEKHA8P1O95397 391 aa21.03■□□□□ 0.96
ACTN4-202ENST00000390009 NT5C2P49902 561 aa21.03■□□□□ 0.96
ACTN4-202ENST00000390009 HS1BP3Q53T59 392 aa21.03■□□□□ 0.96
ACTN4-202ENST00000390009 MSL1Q68DK7 614 aa21.03■□□□□ 0.96
ACTN4-202ENST00000390009 OLFM4Q6UX06 510 aa21.03■□□□□ 0.96
ACTN4-202ENST00000390009 SLF2Q8IX21 1173 aa21.03■□□□□ 0.96
ACTN4-202ENST00000390009 MPNDQ8N594 471 aa21.03■□□□□ 0.96
ACTN4-202ENST00000390009 COA1Q9GZY4 146 aa21.03■□□□□ 0.96
ACTN4-202ENST00000390009 GTF2IP78347 998 aa21.02■□□□□ 0.96
ACTN4-202ENST00000390009 FAM163AQ96GL9 167 aaPredicted RBP21.02■□□□□ 0.96
ACTN4-202ENST00000390009 MAP3K14Q99558 947 aa21.02■□□□□ 0.96
ACTN4-202ENST00000390009 FOCADQ5VW36 1801 aa21.02■□□□□ 0.96
ACTN4-202ENST00000390009 PLCG2P16885 1265 aa21.02■□□□□ 0.96
ACTN4-202ENST00000390009 NDUFA8P51970 172 aa21.02■□□□□ 0.96
ACTN4-202ENST00000390009 TFAP4Q01664 338 aa21.02■□□□□ 0.96
ACTN4-202ENST00000390009 PTPAQ15257 358 aa21.02■□□□□ 0.96
ACTN4-202ENST00000390009 ANO6Q4KMQ2 910 aa21.02■□□□□ 0.96
ACTN4-202ENST00000390009 AXDND1Q5T1B0 1012 aaPredicted RBP21.02■□□□□ 0.96
ACTN4-202ENST00000390009 MASTLQ96GX5 879 aa21.02■□□□□ 0.96
ACTN4-202ENST00000390009 FOXP1Q9H334 677 aaPredicted RBP21.02■□□□□ 0.96
ACTN4-202ENST00000390009 GAKO14976 1311 aa21.02■□□□□ 0.95
ACTN4-202ENST00000390009 PRPF3O43395 683 aaKnown RBP21.01■□□□□ 0.95
ACTN4-202ENST00000390009 MARCKSP29966 332 aaPredicted RBP21.01■□□□□ 0.95
ACTN4-202ENST00000390009 PKN1Q16512 942 aa21.01■□□□□ 0.95
ACTN4-202ENST00000390009 RCSD1Q6JBY9 416 aa21.01■□□□□ 0.95
ACTN4-202ENST00000390009 TMTC3Q6ZXV5 915 aa21.01■□□□□ 0.95
ACTN4-202ENST00000390009 TEX11Q8IYF3 940 aa21.01■□□□□ 0.95
ACTN4-202ENST00000390009 CTCFLQ8NI51 663 aaPredicted RBP21.01■□□□□ 0.95
ACTN4-202ENST00000390009 MKNK2Q9HBH9 465 aa21.01■□□□□ 0.95
ACTN4-202ENST00000390009 SAP30BPQ9UHR5 308 aaKnown RBP21.01■□□□□ 0.95
ACTN4-202ENST00000390009 PPP6R2O75170 966 aa21.01■□□□□ 0.95
ACTN4-202ENST00000390009 WDHD1O75717 1129 aaPredicted RBP21.01■□□□□ 0.95
ACTN4-202ENST00000390009 PLCD1P51178 756 aa21.01■□□□□ 0.95
ACTN4-202ENST00000390009 ZC3H12CQ9C0D7 883 aaKnown RBP21.01■□□□□ 0.95
ACTN4-202ENST00000390009 RHBDL3P58872 404 aa21■□□□□ 0.95
ACTN4-202ENST00000390009 DPP8Q6V1X1 898 aaPredicted RBP21■□□□□ 0.95
ACTN4-202ENST00000390009 JMYQ8N9B5 988 aa21■□□□□ 0.95
ACTN4-202ENST00000390009 IL17RBQ9NRM6 502 aa21■□□□□ 0.95
ACTN4-202ENST00000390009 V9GY48 417 aaPredicted RBP21■□□□□ 0.95
ACTN4-202ENST00000390009 BAZ2BQ9UIF8 2168 aaKnown RBP21■□□□□ 0.95
ACTN4-202ENST00000390009 XBP1P17861 261 aa20.99■□□□□ 0.95
ACTN4-202ENST00000390009 CMA1P23946 247 aa20.99■□□□□ 0.95
ACTN4-202ENST00000390009 QSER1Q2KHR3 1735 aa20.99■□□□□ 0.95
ACTN4-202ENST00000390009 ADCY5O95622 1261 aa20.99■□□□□ 0.95
ACTN4-202ENST00000390009 DGKHQ86XP1 1220 aa20.99■□□□□ 0.95
ACTN4-202ENST00000390009 SLC44A5Q8NCS7 719 aa20.99■□□□□ 0.95
ACTN4-202ENST00000390009 SHISA4Q96DD7 197 aa20.99■□□□□ 0.95
ACTN4-202ENST00000390009 TMX4Q9H1E5 349 aaPredicted RBP20.99■□□□□ 0.95
ACTN4-202ENST00000390009 VPS54Q9P1Q0 977 aa20.99■□□□□ 0.95
ACTN4-202ENST00000390009 FLT1P17948 1338 aa20.99■□□□□ 0.95
ACTN4-202ENST00000390009 CNTNAP5Q8WYK1 1306 aa20.99■□□□□ 0.95
ACTN4-202ENST00000390009 hCG_1642624A0A1W2PR95 340 aa20.98■□□□□ 0.95
ACTN4-202ENST00000390009 NR5A1Q13285 461 aa20.98■□□□□ 0.95
ACTN4-202ENST00000390009 ZSCAN30Q86W11 494 aa20.98■□□□□ 0.95
ACTN4-202ENST00000390009 FBXW7Q969H0 707 aa20.98■□□□□ 0.95
ACTN4-202ENST00000390009 KAT14Q9H8E8 782 aa20.98■□□□□ 0.95
ACTN4-202ENST00000390009 CBX8Q9HC52 389 aa20.98■□□□□ 0.95
ACTN4-202ENST00000390009 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.98■□□□□ 0.95
ACTN4-202ENST00000390009 TSPY3P0CV98 308 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms