RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ARHGAP31Q2M1Z3 1444 aa16.02■□□□□ 0.16
RTF1-201ENST00000389629 C8orf74Q6P047 294 aa16.02■□□□□ 0.16
RTF1-201ENST00000389629 FMR1NBQ8N0W7 255 aaPredicted RBP16.02■□□□□ 0.16
RTF1-201ENST00000389629 ZCRB1Q8TBF4 217 aaKnown RBP16.02■□□□□ 0.16
RTF1-201ENST00000389629 MED4Q9NPJ6 270 aa16.02■□□□□ 0.16
RTF1-201ENST00000389629 VIRMAQ69YN4 1812 aaKnown RBP16.02■□□□□ 0.16
RTF1-201ENST00000389629 SOWAHDA6NJG2 315 aa16.02■□□□□ 0.16
RTF1-201ENST00000389629 M0R2C6 588 aa16.02■□□□□ 0.16
RTF1-201ENST00000389629 CCZ1BP86790 482 aa16.02■□□□□ 0.16
RTF1-201ENST00000389629 CCZ1P86791 482 aaPredicted RBP16.02■□□□□ 0.16
RTF1-201ENST00000389629 TBC1D8BQ0IIM8 1120 aa16.02■□□□□ 0.16
RTF1-201ENST00000389629 ZC3H13Q5T200 1668 aaKnown RBP16.02■□□□□ 0.15
RTF1-201ENST00000389629 LMTK2Q8IWU2 1503 aa16.02■□□□□ 0.15
RTF1-201ENST00000389629 CLNS1AP54105 237 aaKnown RBP16.02■□□□□ 0.15
RTF1-201ENST00000389629 SEPT7Q16181 437 aaKnown RBP16.02■□□□□ 0.15
RTF1-201ENST00000389629 NOSTRINQ8IVI9 506 aa16.02■□□□□ 0.15
RTF1-201ENST00000389629 OSBPL5Q9H0X9 879 aaPredicted RBP16.02■□□□□ 0.15
RTF1-201ENST00000389629 CHGBP05060 677 aa16.02■□□□□ 0.15
RTF1-201ENST00000389629 E4F1Q66K89 784 aaPredicted RBP16.02■□□□□ 0.15
RTF1-201ENST00000389629 PUS3Q9BZE2 481 aaKnown RBP16.02■□□□□ 0.15
RTF1-201ENST00000389629 ASIC1P78348 528 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 VSTM4Q8IW00 320 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 BLZF1Q9H2G9 400 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 SHPRHQ149N8 1683 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 ERCC3P19447 782 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 PPFIA1Q13136 1202 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 CASP8Q14790 479 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 ARMCX5Q6P1M9 558 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 CDC5LQ99459 802 aaKnown RBP16.01■□□□□ 0.15
RTF1-201ENST00000389629 CAPS2Q9BXY5 557 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 UBA5Q9GZZ9 404 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 INCENPQ9NQS7 918 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.01■□□□□ 0.15
RTF1-201ENST00000389629 ZNF532Q9HCE3 1301 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 FCHSD1Q86WN1 690 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 GRAMD1CQ8IYS0 662 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 ARFGAP2Q8N6H7 521 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 TMEM232C9JQI7 657 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 FGFR1OPO95684 399 aaKnown RBP16.01■□□□□ 0.15
RTF1-201ENST00000389629 CASP14P31944 242 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 SELENOSQ9BQE4 189 aa16.01■□□□□ 0.15
RTF1-201ENST00000389629 V9GY48 417 aaPredicted RBP16.01■□□□□ 0.15
RTF1-201ENST00000389629 EIF3CLB5ME19 914 aaKnown RBP16■□□□□ 0.15
RTF1-201ENST00000389629 IGKV5-2P06315 115 aa16■□□□□ 0.15
RTF1-201ENST00000389629 KIF5BP33176 963 aa16■□□□□ 0.15
RTF1-201ENST00000389629 SPTY2D1Q68D10 685 aaPredicted RBP16■□□□□ 0.15
RTF1-201ENST00000389629 TTLL7Q6ZT98 887 aa16■□□□□ 0.15
RTF1-201ENST00000389629 OSBP2Q969R2 916 aa16■□□□□ 0.15
RTF1-201ENST00000389629 EIF3CQ99613 913 aaKnown RBP16■□□□□ 0.15
RTF1-201ENST00000389629 ZMYM6O95789 1325 aa16■□□□□ 0.15
RTF1-201ENST00000389629 TCERG1LQ5VWI1 586 aa16■□□□□ 0.15
RTF1-201ENST00000389629 IRS4O14654 1257 aaPredicted RBP16■□□□□ 0.15
RTF1-201ENST00000389629 ITGA6P23229 1130 aa16■□□□□ 0.15
RTF1-201ENST00000389629 ADORA1P30542 326 aa16■□□□□ 0.15
RTF1-201ENST00000389629 IKQ13123 557 aaPredicted RBP16■□□□□ 0.15
RTF1-201ENST00000389629 KCTD16Q68DU8 428 aa16■□□□□ 0.15
RTF1-201ENST00000389629 CCDC43Q96MW1 224 aaKnown RBP16■□□□□ 0.15
RTF1-201ENST00000389629 TMEM51Q9NW97 253 aa16■□□□□ 0.15
RTF1-201ENST00000389629 FEZ2Q9UHY8 353 aaPredicted RBP16■□□□□ 0.15
RTF1-201ENST00000389629 KAT14Q9H8E8 782 aa16■□□□□ 0.15
RTF1-201ENST00000389629 VAT1LQ9HCJ6 419 aa16■□□□□ 0.15
RTF1-201ENST00000389629 A0A1B0GUA9 196 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 TOGARAM2Q6ZUX3 1019 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 ACRBPQ8NEB7 543 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 PPANQ9NQ55 473 aaKnown RBP15.99■□□□□ 0.15
RTF1-201ENST00000389629 NEXMIFQ5QGS0 1516 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 EEF2KMTQ96G04 330 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 SH3TC1Q8TE82 1336 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 ANKRD62A6NC57 917 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 E7EVH7 732 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 PAK1Q13153 545 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 VPS36Q86VN1 386 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 CABS1Q96KC9 395 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 VPS54Q9P1Q0 977 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 SEC63Q9UGP8 760 aaKnown RBP15.99■□□□□ 0.15
RTF1-201ENST00000389629 MAGEA9P43362 315 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 AMPD3Q01432 767 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 EFCAB13Q8IY85 973 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 UBLCP1Q8WVY7 318 aaPredicted RBP15.99■□□□□ 0.15
RTF1-201ENST00000389629 SECISBP2LQ93073 1101 aaKnown RBP15.99■□□□□ 0.15
RTF1-201ENST00000389629 CALML4Q96GE6 196 aa15.99■□□□□ 0.15
RTF1-201ENST00000389629 TMX4Q9H1E5 349 aaPredicted RBP15.99■□□□□ 0.15
RTF1-201ENST00000389629 CPS1P31327 1500 aa15.98■□□□□ 0.15
RTF1-201ENST00000389629 ARHGAP25P42331 645 aa15.98■□□□□ 0.15
RTF1-201ENST00000389629 SAMSN1Q9NSI8 373 aaKnown RBP15.98■□□□□ 0.15
RTF1-201ENST00000389629 INO80Q9ULG1 1556 aaPredicted RBP15.98■□□□□ 0.15
RTF1-201ENST00000389629 PRDM1O75626 825 aa15.98■□□□□ 0.15
RTF1-201ENST00000389629 RBL2Q08999 1139 aa15.98■□□□□ 0.15
RTF1-201ENST00000389629 SMARCC2Q8TAQ2 1214 aa15.98■□□□□ 0.15
RTF1-201ENST00000389629 TEX13AQ9BXU3 409 aaPredicted RBP15.98■□□□□ 0.15
RTF1-201ENST00000389629 C19orf44Q9H6X5 657 aa15.98■□□□□ 0.15
RTF1-201ENST00000389629 USP42Q9H9J4 1324 aaKnown RBP15.98■□□□□ 0.15
RTF1-201ENST00000389629 PIK3AP1Q6ZUJ8 805 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 STOX1Q6ZVD7 989 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 PNMA8AQ86V59 439 aaPredicted RBP15.97■□□□□ 0.15
RTF1-201ENST00000389629 ZNF444Q8N0Y2 327 aaPredicted RBP15.97■□□□□ 0.15
RTF1-201ENST00000389629 RTL9Q8NET4 1388 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 MROH2AA6NES4 1674 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 A0A087WUV0 522 aaPredicted RBP15.97■□□□□ 0.15
RTF1-201ENST00000389629 GCOM1H8Y6P7 765 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms