RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 LEO1Q8WVC0 666 aaPredicted RBP14.59□□□□□ -0.07
PTPRN2-203ENST00000389418 SELENOOQ9BVL4 669 aa14.59□□□□□ -0.07
PTPRN2-203ENST00000389418 SYNCQ9H7C4 482 aa14.59□□□□□ -0.07
PTPRN2-203ENST00000389418 THRAP3Q9Y2W1 955 aaKnown RBP14.59□□□□□ -0.07
PTPRN2-203ENST00000389418 ZNF804BA4D1E1 1349 aa14.59□□□□□ -0.07
PTPRN2-203ENST00000389418 AGLP35573 1532 aa14.59□□□□□ -0.07
PTPRN2-203ENST00000389418 ERICH4A6NGS2 130 aa14.59□□□□□ -0.07
PTPRN2-203ENST00000389418 H7C1D1 291 aa14.59□□□□□ -0.07
PTPRN2-203ENST00000389418 TACC1O75410 805 aa14.59□□□□□ -0.07
PTPRN2-203ENST00000389418 DYDC1Q8WWB3 177 aa14.59□□□□□ -0.07
PTPRN2-203ENST00000389418 CUTAO60888 179 aa14.58□□□□□ -0.07
PTPRN2-203ENST00000389418 FGAP02671 866 aa14.58□□□□□ -0.07
PTPRN2-203ENST00000389418 DYNLL1P63167 89 aaKnown RBP14.58□□□□□ -0.07
PTPRN2-203ENST00000389418 NONOQ15233 471 aaKnown RBP eCLIP14.58□□□□□ -0.07
PTPRN2-203ENST00000389418 KIAA0753Q2KHM9 967 aa14.58□□□□□ -0.07
PTPRN2-203ENST00000389418 NLRP10Q86W26 655 aa14.58□□□□□ -0.07
PTPRN2-203ENST00000389418 LMBRD1Q9NUN5 540 aa14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 KRT86O43790 486 aa14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 CCNT1O60563 726 aaKnown RBP14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 BRD1O95696 1058 aa14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 GJC1P36383 396 aa14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 HLTFQ14527 1009 aaKnown RBP eCLIP14.58□□□□□ -0.088e-7■■■□□ 15.4
PTPRN2-203ENST00000389418 SUSD4Q5VX71 490 aa14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 NEK11Q8NG66 645 aa14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 BBXQ8WY36 941 aaPredicted RBP14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 SRRTQ9BXP5 876 aaKnown RBP14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 ZBED4O75132 1171 aa14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 ATG3Q9NT62 314 aa14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 TBC1D7Q9P0N9 293 aa14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 CEP152O94986 1710 aa14.58□□□□□ -0.08
PTPRN2-203ENST00000389418 CYP2D7A0A087X1C5 515 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 PRKAB2O43741 272 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 MYCP01106 439 aaPredicted RBP14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 CCDC175P0C221 793 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 BTDP43251 543 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 SMTNP53814 917 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 MYL5Q02045 173 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 HS1BP3Q53T59 392 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 SMCR8Q8TEV9 937 aaPredicted RBP14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 CCDC42Q96M95 316 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 CCDC113Q9H0I3 377 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 HSPD1P10809 573 aaKnown RBP14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 CACNB3P54284 484 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 PPARAQ07869 468 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 KIF5AQ12840 1032 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 KRT40Q6A162 431 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 CNNM4Q6P4Q7 775 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 GOPCQ9HD26 462 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 POLR3GO15318 223 aaPredicted RBP14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 ADCY7P51828 1080 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 IFNL3Q8IZI9 196 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 HAUS7Q99871 368 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 CEP83Q9Y592 693 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 ADGRB3O60242 1522 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 E9PCH4 1651 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 ABCA6Q8N139 1617 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 CHURC1Q8WUH1 139 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 KCNH3Q9ULD8 1083 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 IVNS1ABPQ9Y6Y0 642 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 PALLDQ8WX93 1383 aa14.57□□□□□ -0.08
PTPRN2-203ENST00000389418 KIDINS220Q9ULH0 1771 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 MKRN3Q13064 507 aaKnown RBP14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 EPHA10Q5JZY3 1008 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 LEMD3Q9Y2U8 911 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 CDK12Q9NYV4 1490 aaPredicted RBP14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 SHTN1A0MZ66 631 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 PKP1Q13835 747 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 CNGA4Q8IV77 575 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 SIRT2Q8IXJ6 389 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 ZNF274Q96GC6 653 aaPredicted RBP14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 STAP2Q9UGK3 403 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 MRVI1Q9Y6F6 885 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 PSDA5PKW4 1024 aaPredicted RBP14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 ERVV-1B6SEH8 477 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 TERF1P54274 439 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 SMC1AQ14683 1233 aaKnown RBP14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 UBE3CQ15386 1083 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 TTC38Q5R3I4 469 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 DYMQ7RTS9 669 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 RASEFQ8IZ41 740 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 EEF2KMTQ96G04 330 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 FRMD4BQ9Y2L6 1034 aa14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 LUC7L2Q9Y383 392 aaKnown RBP14.56□□□□□ -0.08
PTPRN2-203ENST00000389418 DYNC1I1O14576 645 aa14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 CCT6AP40227 531 aaKnown RBP14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 ADCK5Q3MIX3 580 aa14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 GPKOWQ92917 476 aaPredicted RBP eCLIP14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.55□□□□□ -0.083e-7■■■■■ 33.4
PTPRN2-203ENST00000389418 EXOC7Q9UPT5 735 aa14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 C21orf2O43822 256 aa14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 DCAF17Q5H9S7 520 aaPredicted RBP14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 FSD2A1L4K1 749 aa14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 ARID4AP29374 1257 aaPredicted RBP14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 VWA3BQ502W6 1294 aa14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 NCAPH2Q6IBW4 605 aa14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 ZNF589Q86UQ0 364 aaPredicted RBP14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 GTF3C6Q969F1 213 aa14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 TMEM63CQ9P1W3 806 aa14.55□□□□□ -0.08
PTPRN2-203ENST00000389418 POLR2DO15514 142 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms