RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 ZNF512BQ96KM6 892 aaPredicted RBP27.77■■■□□ 2.04
VLDLR-201ENST00000382096 MYH1P12882 1939 aa27.77■■■□□ 2.04
VLDLR-201ENST00000382096 SURF6O75683 361 aaKnown RBP27.76■■■□□ 2.03
VLDLR-201ENST00000382096 PLCG2P16885 1265 aa27.76■■■□□ 2.03
VLDLR-201ENST00000382096 MNX1P50219 401 aaPredicted RBP27.76■■■□□ 2.03
VLDLR-201ENST00000382096 IRX3P78415 501 aaPredicted RBP27.76■■■□□ 2.03
VLDLR-201ENST00000382096 METTL16Q86W50 562 aaKnown RBP27.76■■■□□ 2.03
VLDLR-201ENST00000382096 TRIB2Q92519 343 aa27.76■■■□□ 2.03
VLDLR-201ENST00000382096 GDF15Q99988 308 aa27.76■■■□□ 2.03
VLDLR-201ENST00000382096 DBNDD2Q9BQY9 259 aa27.76■■■□□ 2.03
VLDLR-201ENST00000382096 FRMPD3Q5JV73 1810 aa27.76■■■□□ 2.03
VLDLR-201ENST00000382096 A0A0C4DFX4 3053 aa27.76■■■□□ 2.03
VLDLR-201ENST00000382096 BAG3O95817 575 aa27.75■■■□□ 2.03
VLDLR-201ENST00000382096 BMP8BP34820 402 aa27.75■■■□□ 2.03
VLDLR-201ENST00000382096 MAP3K21Q5TCX8 1036 aa27.75■■■□□ 2.03
VLDLR-201ENST00000382096 NAA16Q6N069 864 aaPredicted RBP27.75■■■□□ 2.03
VLDLR-201ENST00000382096 LRCH3Q96II8 777 aa27.75■■■□□ 2.03
VLDLR-201ENST00000382096 NBPF3Q9H094 633 aa27.75■■■□□ 2.03
VLDLR-201ENST00000382096 DNAJC18Q9H819 358 aa27.75■■■□□ 2.03
VLDLR-201ENST00000382096 AATFQ9NY61 560 aaKnown RBP eCLIP27.75■■■□□ 2.03
VLDLR-201ENST00000382096 IGSF3O75054 1194 aa27.74■■■□□ 2.03
VLDLR-201ENST00000382096 PPP4CP60510 307 aa27.74■■■□□ 2.03
VLDLR-201ENST00000382096 JAG1P78504 1218 aa27.74■■■□□ 2.03
VLDLR-201ENST00000382096 OS9Q13438 667 aaPredicted RBP27.74■■■□□ 2.03
VLDLR-201ENST00000382096 CCDC158Q5M9N0 1113 aa27.74■■■□□ 2.03
VLDLR-201ENST00000382096 C7orf61Q8IZ16 206 aa27.74■■■□□ 2.03
VLDLR-201ENST00000382096 TMOD4Q9NZQ9 345 aa27.74■■■□□ 2.03
VLDLR-201ENST00000382096 OGDHLQ9ULD0 1010 aa27.74■■■□□ 2.03
VLDLR-201ENST00000382096 FLT1P17948 1338 aa27.73■■■□□ 2.03
VLDLR-201ENST00000382096 C19orf81C9J6K1 198 aa27.73■■■□□ 2.03
VLDLR-201ENST00000382096 XRCC5P13010 732 aaKnown RBP27.73■■■□□ 2.03
VLDLR-201ENST00000382096 HERVK_113P62684 666 aa27.73■■■□□ 2.03
VLDLR-201ENST00000382096 TTC39AQ5SRH9 613 aa27.73■■■□□ 2.03
VLDLR-201ENST00000382096 SOCS4Q8WXH5 440 aa27.73■■■□□ 2.03
VLDLR-201ENST00000382096 P2RX7Q99572 595 aaKnown RBP27.73■■■□□ 2.03
VLDLR-201ENST00000382096 GINM1Q9NU53 330 aa27.73■■■□□ 2.03
VLDLR-201ENST00000382096 DNAH12Q6ZR08 3092 aa27.73■■■□□ 2.03
VLDLR-201ENST00000382096 ADGRA1Q86SQ6 560 aa27.72■■■□□ 2.03
VLDLR-201ENST00000382096 FOXP4Q8IVH2 680 aaPredicted RBP27.72■■■□□ 2.03
VLDLR-201ENST00000382096 GPRC5AQ8NFJ5 357 aa27.72■■■□□ 2.03
VLDLR-201ENST00000382096 TGFBRAP1Q8WUH2 860 aa27.72■■■□□ 2.03
VLDLR-201ENST00000382096 TXNRD2Q9NNW7 524 aa27.72■■■□□ 2.03
VLDLR-201ENST00000382096 SNRKQ9NRH2 765 aa27.72■■■□□ 2.03
VLDLR-201ENST00000382096 CEP85Q6P2H3 762 aa27.71■■■□□ 2.03
VLDLR-201ENST00000382096 MAPKAPK5Q8IW41 473 aa27.71■■■□□ 2.03
VLDLR-201ENST00000382096 NUDT12Q9BQG2 462 aa27.71■■■□□ 2.03
VLDLR-201ENST00000382096 C11orf49Q9H6J7 331 aa27.71■■■□□ 2.03
VLDLR-201ENST00000382096 USP17L10C9JJH3 530 aa27.7■■■□□ 2.02
VLDLR-201ENST00000382096 CYP2E1P05181 493 aaPredicted RBP27.7■■■□□ 2.02
VLDLR-201ENST00000382096 PRKAR2AP13861 404 aaKnown RBP27.7■■■□□ 2.02
VLDLR-201ENST00000382096 CYP2B6P20813 491 aa27.7■■■□□ 2.02
VLDLR-201ENST00000382096 DBNLQ9UJU6 430 aaKnown RBP27.7■■■□□ 2.02
VLDLR-201ENST00000382096 ZMYND8Q9ULU4 1186 aaPredicted RBP27.7■■■□□ 2.02
VLDLR-201ENST00000382096 PEX10O60683 326 aa27.69■■■□□ 2.02
VLDLR-201ENST00000382096 MAPK4P31152 587 aa27.69■■■□□ 2.02
VLDLR-201ENST00000382096 SHROOM1Q2M3G4 852 aaPredicted RBP27.69■■■□□ 2.02
VLDLR-201ENST00000382096 GPR153Q6NV75 609 aa27.69■■■□□ 2.02
VLDLR-201ENST00000382096 TRMT44Q8IYL2 757 aaKnown RBP27.69■■■□□ 2.02
VLDLR-201ENST00000382096 CRACR2BQ8N4Y2 399 aaPredicted RBP27.69■■■□□ 2.02
VLDLR-201ENST00000382096 RBPJLQ9UBG7 517 aa27.69■■■□□ 2.02
VLDLR-201ENST00000382096 PALD1Q9ULE6 856 aa27.69■■■□□ 2.02
VLDLR-201ENST00000382096 ZBTB21Q9ULJ3 1066 aa27.69■■■□□ 2.02
VLDLR-201ENST00000382096 GDF11O95390 407 aa27.68■■■□□ 2.02
VLDLR-201ENST00000382096 SLC17A8Q8NDX2 589 aa27.68■■■□□ 2.02
VLDLR-201ENST00000382096 USP6NLQ92738 828 aa27.68■■■□□ 2.02
VLDLR-201ENST00000382096 TRIM34Q9BYJ4 488 aa27.68■■■□□ 2.02
VLDLR-201ENST00000382096 ERVK-9P63128 1117 aa27.67■■■□□ 2.02
VLDLR-201ENST00000382096 ERVK-24P63145 666 aa27.67■■■□□ 2.02
VLDLR-201ENST00000382096 PDE3AQ14432 1141 aa27.67■■■□□ 2.02
VLDLR-201ENST00000382096 PANK1Q8TE04 598 aa27.67■■■□□ 2.02
VLDLR-201ENST00000382096 GTF3C2Q8WUA4 911 aaPredicted RBP27.67■■■□□ 2.02
VLDLR-201ENST00000382096 EAF2Q96CJ1 260 aaPredicted RBP27.67■■■□□ 2.02
VLDLR-201ENST00000382096 TLR7Q9NYK1 1049 aaKnown RBP27.67■■■□□ 2.02
VLDLR-201ENST00000382096 PFASO15067 1338 aa27.67■■■□□ 2.02
VLDLR-201ENST00000382096 ZKSCAN1P17029 563 aaPredicted RBP27.65■■■□□ 2.02
VLDLR-201ENST00000382096 ZAP70P43403 619 aa27.65■■■□□ 2.02
VLDLR-201ENST00000382096 POTEEQ6S8J3 1075 aa27.65■■■□□ 2.02
VLDLR-201ENST00000382096 PORCNQ9H237 461 aa27.65■■■□□ 2.02
VLDLR-201ENST00000382096 PIH1D3Q9NQM4 214 aaKnown RBP27.65■■■□□ 2.02
VLDLR-201ENST00000382096 EMILIN3Q9NT22 766 aa27.65■■■□□ 2.02
VLDLR-201ENST00000382096 LAMA2P24043 3122 aaKnown RBP27.64■■■□□ 2.02
VLDLR-201ENST00000382096 HLA-DOAP06340 250 aa27.64■■■□□ 2.02
VLDLR-201ENST00000382096 COL6A1P12109 1028 aa27.64■■■□□ 2.02
VLDLR-201ENST00000382096 SYN1P17600 705 aa27.64■■■□□ 2.02
VLDLR-201ENST00000382096 MAGEA10P43363 369 aaPredicted RBP27.64■■■□□ 2.02
VLDLR-201ENST00000382096 CACNB2Q08289 660 aaPredicted RBP27.64■■■□□ 2.02
VLDLR-201ENST00000382096 Q3C1V9 767 aa27.64■■■□□ 2.02
VLDLR-201ENST00000382096 MORN1Q5T089 497 aa27.64■■■□□ 2.02
VLDLR-201ENST00000382096 GPR142Q7Z601 462 aa27.64■■■□□ 2.02
VLDLR-201ENST00000382096 CCDC8Q9H0W5 538 aaPredicted RBP27.64■■■□□ 2.02
VLDLR-201ENST00000382096 SAP30BPQ9UHR5 308 aaKnown RBP27.64■■■□□ 2.02
VLDLR-201ENST00000382096 CUL9Q8IWT3 2517 aa27.63■■■□□ 2.01
VLDLR-201ENST00000382096 MS4A1P11836 297 aa27.63■■■□□ 2.01
VLDLR-201ENST00000382096 RGS2P41220 211 aa27.63■■■□□ 2.01
VLDLR-201ENST00000382096 LRIT3Q3SXY7 679 aa27.63■■■□□ 2.01
VLDLR-201ENST00000382096 USP17L2Q6R6M4 530 aa27.63■■■□□ 2.01
VLDLR-201ENST00000382096 ERC1Q8IUD2 1116 aa27.63■■■□□ 2.01
VLDLR-201ENST00000382096 APBA2Q99767 749 aa27.63■■■□□ 2.01
VLDLR-201ENST00000382096 PLEKHH3Q7Z736 793 aa27.62■■■□□ 2.01
VLDLR-201ENST00000382096 CCAR1Q8IX12 1150 aaKnown RBP27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms