RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 MCM3P25205 808 aa13.73□□□□□ -0.21
SHOX-203ENST00000381578 BRINP3Q76B58 766 aa13.73□□□□□ -0.21
SHOX-203ENST00000381578 DIS3L2Q8IYB7 885 aaKnown RBP13.73□□□□□ -0.21
SHOX-203ENST00000381578 KLHL34Q8N239 644 aa13.73□□□□□ -0.21
SHOX-203ENST00000381578 TFR2Q9UP52 801 aa13.73□□□□□ -0.21
SHOX-203ENST00000381578 FAM169AQ9Y6X4 670 aa13.73□□□□□ -0.21
SHOX-203ENST00000381578 NALCNQ8IZF0 1738 aa13.73□□□□□ -0.21
SHOX-203ENST00000381578 SPA17Q15506 151 aa13.73□□□□□ -0.21
SHOX-203ENST00000381578 LRRC31Q6UY01 552 aa13.73□□□□□ -0.21
SHOX-203ENST00000381578 CTCFLQ8NI51 663 aaPredicted RBP13.73□□□□□ -0.21
SHOX-203ENST00000381578 ZNF274Q96GC6 653 aaPredicted RBP13.73□□□□□ -0.21
SHOX-203ENST00000381578 MAN1B1Q9UKM7 699 aa13.73□□□□□ -0.21
SHOX-203ENST00000381578 SYNRGQ9UMZ2 1314 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 MINDY4BA8MYZ0 360 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 GGCXP38435 758 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 FMR1Q06787 632 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHOX-203ENST00000381578 FCHSD1Q86WN1 690 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 MLKLQ8NB16 471 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 CCDC114Q96M63 670 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 CAPS2Q9BXY5 557 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 TTF2Q9UNY4 1162 aaKnown RBP13.72□□□□□ -0.21
SHOX-203ENST00000381578 PIK3C2AO00443 1686 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 BEND6Q5SZJ8 279 aaPredicted RBP13.72□□□□□ -0.21
SHOX-203ENST00000381578 RAD9BQ6WBX8 426 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 TC2NQ8N9U0 490 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 MED4Q9NPJ6 270 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.72□□□□□ -0.21
SHOX-203ENST00000381578 NOP2P46087 812 aaKnown RBP13.72□□□□□ -0.21
SHOX-203ENST00000381578 ADGRG1Q9Y653 693 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 MROH7-TTC4A0A0A0MT08 1334 aa13.72□□□□□ -0.21
SHOX-203ENST00000381578 XBP1P17861 261 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 GCKRQ14397 625 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 IQCEQ6IPM2 695 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 SHC4Q6S5L8 630 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 TANGO6Q9C0B7 1094 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 BRMS1Q9HCU9 246 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 CNNM1Q9NRU3 951 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 TRIM10Q9UDY6 481 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 FGAP02671 866 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 FDPSP14324 419 aaKnown RBP13.71□□□□□ -0.21
SHOX-203ENST00000381578 GBP2P32456 591 aaPredicted RBP13.71□□□□□ -0.21
SHOX-203ENST00000381578 PAFAH1B1P43034 410 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 CABP4P57796 275 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 NAA25Q14CX7 972 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 SLC9C2Q5TAH2 1124 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 IFNL2Q8IZJ0 200 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 NAPBQ9H115 298 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 EHD4Q9H223 541 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 TBC1D2BQ9UPU7 963 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 SAR1BQ9Y6B6 198 aa13.71□□□□□ -0.21
SHOX-203ENST00000381578 LRRIQ3A6PVS8 624 aaPredicted RBP13.71□□□□□ -0.22
SHOX-203ENST00000381578 SLC7A5Q01650 507 aa13.71□□□□□ -0.22
SHOX-203ENST00000381578 PDCLQ13371 301 aa13.71□□□□□ -0.22
SHOX-203ENST00000381578 E2F5Q15329 346 aa13.71□□□□□ -0.22
SHOX-203ENST00000381578 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.22
SHOX-203ENST00000381578 WWC3Q9ULE0 1092 aa13.71□□□□□ -0.22
SHOX-203ENST00000381578 LUC7L2Q9Y383 392 aaKnown RBP13.71□□□□□ -0.22
SHOX-203ENST00000381578 FAM170AA1A519 330 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 MYO1BO43795 1136 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 PEAK1Q9H792 1746 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 CDC27P30260 824 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 CXCR5P32302 372 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 ZNF174Q15697 407 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 WHAMMP3Q1A5X7 153 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 PI16Q6UXB8 463 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 METTL16Q86W50 562 aaKnown RBP13.7□□□□□ -0.22
SHOX-203ENST00000381578 ZNF526Q8TF50 670 aaPredicted RBP13.7□□□□□ -0.22
SHOX-203ENST00000381578 TRIM47Q96LD4 638 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 SPATA31A3Q5VYP0 1347 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 NRKQ7Z2Y5 1582 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 ACTN3Q08043 901 aaPredicted RBP13.7□□□□□ -0.22
SHOX-203ENST00000381578 C2orf54Q08AI8 447 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 METTL24Q5JXM2 366 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 ANKRD13CQ8N6S4 541 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 NFATC2IPQ8NCF5 419 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 CTAGE1Q96RT6 745 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 PPANQ9NQ55 473 aaKnown RBP13.7□□□□□ -0.22
SHOX-203ENST00000381578 BABAM1Q9NWV8 329 aa13.7□□□□□ -0.22
SHOX-203ENST00000381578 NEBLO76041 1014 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 RPSAP08865 295 aaKnown RBP13.69□□□□□ -0.22
SHOX-203ENST00000381578 CKAP4Q07065 602 aaKnown RBP13.69□□□□□ -0.22
SHOX-203ENST00000381578 PPP2R5AQ15172 486 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 CYP26C1Q6V0L0 522 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 ILDR1Q86SU0 546 aaPredicted RBP13.69□□□□□ -0.22
SHOX-203ENST00000381578 CXorf56Q9H5V9 222 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 ANKZF1Q9H8Y5 726 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 DDX21Q9NR30 783 aaKnown RBP eCLIP13.69□□□□□ -0.22
SHOX-203ENST00000381578 KRT86O43790 486 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 AKR1B10O60218 316 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 MTIF2P46199 727 aaKnown RBP13.69□□□□□ -0.22
SHOX-203ENST00000381578 GUCY2FP51841 1108 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 CORO7P57737 925 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 NR5A1Q13285 461 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 TAX1BP1Q86VP1 789 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 TMTC1Q8IUR5 882 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 HAUS7Q99871 368 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 HELLSQ9NRZ9 838 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 CEP131Q9UPN4 1083 aa13.69□□□□□ -0.22
SHOX-203ENST00000381578 MST1RQ04912 1400 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms