RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 MAPK4P31152 587 aa19.59■□□□□ 0.73
VCX3A-201ENST00000381089 HERVK_113P62684 666 aa19.59■□□□□ 0.73
VCX3A-201ENST00000381089 MAPKAPK5Q8IW41 473 aa19.59■□□□□ 0.73
VCX3A-201ENST00000381089 C11orf49Q9H6J7 331 aa19.59■□□□□ 0.73
VCX3A-201ENST00000381089 SNRKQ9NRH2 765 aa19.59■□□□□ 0.73
VCX3A-201ENST00000381089 XRCC5P13010 732 aaKnown RBP19.58■□□□□ 0.72
VCX3A-201ENST00000381089 TNNI3KQ59H18 835 aa19.58■□□□□ 0.72
VCX3A-201ENST00000381089 P2RX7Q99572 595 aaKnown RBP19.58■□□□□ 0.72
VCX3A-201ENST00000381089 CWC22Q9HCG8 908 aaKnown RBP19.58■□□□□ 0.72
VCX3A-201ENST00000381089 FPGT-TNNI3KV9GXZ4 949 aa19.58■□□□□ 0.72
VCX3A-201ENST00000381089 PRKAR2AP13861 404 aaKnown RBP19.57■□□□□ 0.72
VCX3A-201ENST00000381089 ZKSCAN1P17029 563 aaPredicted RBP19.57■□□□□ 0.72
VCX3A-201ENST00000381089 BMP8BP34820 402 aa19.57■□□□□ 0.72
VCX3A-201ENST00000381089 METTL16Q86W50 562 aaKnown RBP19.57■□□□□ 0.72
VCX3A-201ENST00000381089 CERS3Q8IU89 383 aa19.57■□□□□ 0.72
VCX3A-201ENST00000381089 TRIB2Q92519 343 aa19.57■□□□□ 0.72
VCX3A-201ENST00000381089 CLUAP1Q96AJ1 413 aa19.57■□□□□ 0.72
VCX3A-201ENST00000381089 OGDHLQ9ULD0 1010 aa19.57■□□□□ 0.72
VCX3A-201ENST00000381089 GDF11O95390 407 aa19.56■□□□□ 0.72
VCX3A-201ENST00000381089 TRIM32Q13049 653 aa19.56■□□□□ 0.72
VCX3A-201ENST00000381089 SLC17A8Q8NDX2 589 aa19.56■□□□□ 0.72
VCX3A-201ENST00000381089 PALD1Q9ULE6 856 aa19.56■□□□□ 0.72
VCX3A-201ENST00000381089 ZBTB21Q9ULJ3 1066 aa19.56■□□□□ 0.72
VCX3A-201ENST00000381089 ZMYND8Q9ULU4 1186 aaPredicted RBP19.56■□□□□ 0.72
VCX3A-201ENST00000381089 ALPK3Q96L96 1907 aa19.55■□□□□ 0.72
VCX3A-201ENST00000381089 RGS2P41220 211 aa19.55■□□□□ 0.72
VCX3A-201ENST00000381089 ERVK-9P63128 1117 aa19.55■□□□□ 0.72
VCX3A-201ENST00000381089 ERVK-24P63145 666 aa19.55■□□□□ 0.72
VCX3A-201ENST00000381089 MAP3K21Q5TCX8 1036 aa19.55■□□□□ 0.72
VCX3A-201ENST00000381089 USP17L2Q6R6M4 530 aa19.55■□□□□ 0.72
VCX3A-201ENST00000381089 ZNF512BQ96KM6 892 aaPredicted RBP19.55■□□□□ 0.72
VCX3A-201ENST00000381089 GDF15Q99988 308 aa19.55■□□□□ 0.72
VCX3A-201ENST00000381089 DBNDD2Q9BQY9 259 aa19.55■□□□□ 0.72
VCX3A-201ENST00000381089 DDX60LQ5H9U9 1706 aaKnown RBP19.54■□□□□ 0.72
VCX3A-201ENST00000381089 LAMA3Q16787 3333 aa19.54■□□□□ 0.72
VCX3A-201ENST00000381089 SIPA1L1O43166 1804 aa19.54■□□□□ 0.72
VCX3A-201ENST00000381089 FOCADQ5VW36 1801 aa19.54■□□□□ 0.72
VCX3A-201ENST00000381089 CCER2I3L3R5 266 aa19.54■□□□□ 0.72
VCX3A-201ENST00000381089 SURF6O75683 361 aaKnown RBP19.54■□□□□ 0.72
VCX3A-201ENST00000381089 CYP2E1P05181 493 aaPredicted RBP19.54■□□□□ 0.72
VCX3A-201ENST00000381089 ZKSCAN2Q63HK3 967 aa19.54■□□□□ 0.72
VCX3A-201ENST00000381089 GPR153Q6NV75 609 aa19.54■□□□□ 0.72
VCX3A-201ENST00000381089 LRCH3Q96II8 777 aa19.54■□□□□ 0.72
VCX3A-201ENST00000381089 FEZ1Q99689 392 aa19.54■□□□□ 0.72
VCX3A-201ENST00000381089 PAGR1Q9BTK6 254 aa19.54■□□□□ 0.72
VCX3A-201ENST00000381089 DNAJC18Q9H819 358 aa19.54■□□□□ 0.72
VCX3A-201ENST00000381089 TXNRD2Q9NNW7 524 aa19.54■□□□□ 0.72
VCX3A-201ENST00000381089 SAP30BPQ9UHR5 308 aaKnown RBP19.54■□□□□ 0.72
VCX3A-201ENST00000381089 PLXNB2O15031 1838 aa19.53■□□□□ 0.72
VCX3A-201ENST00000381089 SOX1O00570 391 aaPredicted RBP19.53■□□□□ 0.72
VCX3A-201ENST00000381089 BCAR3O75815 825 aa19.53■□□□□ 0.72
VCX3A-201ENST00000381089 GLRX3O76003 335 aaKnown RBP19.53■□□□□ 0.72
VCX3A-201ENST00000381089 CCNA1P78396 465 aa19.53■□□□□ 0.72
VCX3A-201ENST00000381089 POLA2Q14181 598 aa19.53■□□□□ 0.72
VCX3A-201ENST00000381089 PLEKHH3Q7Z736 793 aa19.53■□□□□ 0.72
VCX3A-201ENST00000381089 ADGRA1Q86SQ6 560 aa19.53■□□□□ 0.72
VCX3A-201ENST00000381089 SSH3Q8TE77 659 aa19.53■□□□□ 0.72
VCX3A-201ENST00000381089 CDK5RAP2Q96SN8 1893 aa19.52■□□□□ 0.72
VCX3A-201ENST00000381089 CYP7A1P22680 504 aa19.52■□□□□ 0.72
VCX3A-201ENST00000381089 ZAP70P43403 619 aa19.52■□□□□ 0.72
VCX3A-201ENST00000381089 USP5P45974 858 aa19.52■□□□□ 0.72
VCX3A-201ENST00000381089 USP14P54578 494 aa19.52■□□□□ 0.72
VCX3A-201ENST00000381089 ATP8B2P98198 1209 aa19.52■□□□□ 0.72
VCX3A-201ENST00000381089 GPR142Q7Z601 462 aa19.52■□□□□ 0.72
VCX3A-201ENST00000381089 TMEM57Q8N5G2 664 aa19.52■□□□□ 0.72
VCX3A-201ENST00000381089 APBA2Q99767 749 aa19.52■□□□□ 0.72
VCX3A-201ENST00000381089 RBPJLQ9UBG7 517 aa19.52■□□□□ 0.72
VCX3A-201ENST00000381089 IDH1O75874 414 aaKnown RBP19.51■□□□□ 0.71
VCX3A-201ENST00000381089 GH2P01242 217 aa19.51■□□□□ 0.71
VCX3A-201ENST00000381089 SYN1P17600 705 aa19.51■□□□□ 0.71
VCX3A-201ENST00000381089 MNX1P50219 401 aaPredicted RBP19.51■□□□□ 0.71
VCX3A-201ENST00000381089 JAG1P78504 1218 aa19.51■□□□□ 0.71
VCX3A-201ENST00000381089 TMED8Q6PL24 325 aaPredicted RBP19.51■□□□□ 0.71
VCX3A-201ENST00000381089 FTSJ3Q8IY81 847 aaKnown RBP19.51■□□□□ 0.71
VCX3A-201ENST00000381089 TNNQ9UQP3 1299 aa19.51■□□□□ 0.71
VCX3A-201ENST00000381089 RABGAP1Q9Y3P9 1069 aa19.51■□□□□ 0.71
VCX3A-201ENST00000381089 USP17L15C9J2P7 530 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 USP17L13C9JLJ4 530 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 USP17L11C9JVI0 530 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 USP17L18D6R9N7 530 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 USP17L22D6RA61 530 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 USP17L17D6RBQ6 530 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 USP17L19D6RCP7 530 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 USP17L20D6RJB6 530 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 MAGEA10P43363 369 aaPredicted RBP19.5■□□□□ 0.71
VCX3A-201ENST00000381089 DYNLL1P63167 89 aaKnown RBP19.5■□□□□ 0.71
VCX3A-201ENST00000381089 CACNB2Q08289 660 aaPredicted RBP19.5■□□□□ 0.71
VCX3A-201ENST00000381089 USP17L24Q0WX57 530 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 Q3C1V9 767 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 TDHQ8IZJ6 230 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 MIER1Q8N108 512 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 C12orf42Q96LP6 360 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 PORCNQ9H237 461 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 PIH1D3Q9NQM4 214 aaKnown RBP19.5■□□□□ 0.71
VCX3A-201ENST00000381089 EMILIN3Q9NT22 766 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 SERPINB13Q9UIV8 391 aa19.5■□□□□ 0.71
VCX3A-201ENST00000381089 PEX10O60683 326 aa19.49■□□□□ 0.71
VCX3A-201ENST00000381089 SHROOM1Q2M3G4 852 aaPredicted RBP19.49■□□□□ 0.71
VCX3A-201ENST00000381089 LRIT3Q3SXY7 679 aa19.49■□□□□ 0.71
VCX3A-201ENST00000381089 MORN1Q5T089 497 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms