RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 MKRN3Q13064 507 aaKnown RBP23.84■■□□□ 1.41
CDPF1-202ENST00000381037 PPIL2Q13356 520 aa23.84■■□□□ 1.41
CDPF1-202ENST00000381037 MS4A4AQ96JQ5 239 aa23.84■■□□□ 1.41
CDPF1-202ENST00000381037 GINM1Q9NU53 330 aa23.84■■□□□ 1.41
CDPF1-202ENST00000381037 GDF11O95390 407 aa23.83■■□□□ 1.41
CDPF1-202ENST00000381037 RUFY2Q8WXA3 655 aa23.83■■□□□ 1.41
CDPF1-202ENST00000381037 PICK1Q9NRD5 415 aa23.83■■□□□ 1.41
CDPF1-202ENST00000381037 DOCK1Q14185 1865 aa23.83■■□□□ 1.4
CDPF1-202ENST00000381037 ASNSP08243 561 aa23.82■■□□□ 1.4
CDPF1-202ENST00000381037 CERKLQ49MI3 558 aaPredicted RBP23.82■■□□□ 1.4
CDPF1-202ENST00000381037 DSCC1Q9BVC3 393 aa23.82■■□□□ 1.4
CDPF1-202ENST00000381037 ANAPC4Q9UJX5 808 aa23.82■■□□□ 1.4
CDPF1-202ENST00000381037 ZBTB21Q9ULJ3 1066 aa23.82■■□□□ 1.4
CDPF1-202ENST00000381037 KCNH4Q9UQ05 1017 aa23.82■■□□□ 1.4
CDPF1-202ENST00000381037 ZHX2Q9Y6X8 837 aa23.82■■□□□ 1.4
CDPF1-202ENST00000381037 LAMB1P07942 1786 aa23.82■■□□□ 1.4
CDPF1-202ENST00000381037 TESPA1A2RU30 521 aaPredicted RBP23.81■■□□□ 1.4
CDPF1-202ENST00000381037 TM4SF4P48230 202 aa23.81■■□□□ 1.4
CDPF1-202ENST00000381037 PPARAQ07869 468 aa23.81■■□□□ 1.4
CDPF1-202ENST00000381037 CCDC84Q86UT8 332 aaPredicted RBP23.81■■□□□ 1.4
CDPF1-202ENST00000381037 AFG3L2Q9Y4W6 797 aa23.81■■□□□ 1.4
CDPF1-202ENST00000381037 MANSC4A6NHS7 340 aaPredicted RBP23.8■■□□□ 1.4
CDPF1-202ENST00000381037 GH2P01242 217 aa23.8■■□□□ 1.4
CDPF1-202ENST00000381037 REM2Q8IYK8 340 aaPredicted RBP23.8■■□□□ 1.4
CDPF1-202ENST00000381037 PHIPQ8WWQ0 1821 aa23.79■■□□□ 1.4
CDPF1-202ENST00000381037 GUCY1A2P33402 732 aa23.79■■□□□ 1.4
CDPF1-202ENST00000381037 INHBEP58166 350 aa23.79■■□□□ 1.4
CDPF1-202ENST00000381037 ABCB5Q2M3G0 1257 aa23.79■■□□□ 1.4
CDPF1-202ENST00000381037 ESYT1Q9BSJ8 1104 aa23.79■■□□□ 1.4
CDPF1-202ENST00000381037 WBP1LQ9NX94 342 aa23.79■■□□□ 1.4
CDPF1-202ENST00000381037 TACC3Q9Y6A5 838 aa23.79■■□□□ 1.4
CDPF1-202ENST00000381037 ATAD5Q96QE3 1844 aa23.78■■□□□ 1.4
CDPF1-202ENST00000381037 USP17L5A8MUK1 530 aa23.78■■□□□ 1.4
CDPF1-202ENST00000381037 CXCL11O14625 94 aa23.78■■□□□ 1.4
CDPF1-202ENST00000381037 CDC45O75419 566 aa23.78■■□□□ 1.4
CDPF1-202ENST00000381037 FGRP09769 529 aa23.78■■□□□ 1.4
CDPF1-202ENST00000381037 CCDC17Q96LX7 622 aa23.78■■□□□ 1.4
CDPF1-202ENST00000381037 AKR1B1P15121 316 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 RASA1P20936 1047 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 GTF2A2P52657 109 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 MAP2K1Q02750 393 aaPredicted RBP23.77■■□□□ 1.4
CDPF1-202ENST00000381037 PTH1RQ03431 593 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 MOGSQ13724 837 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 BRI3BPQ8WY22 251 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 PTPN18Q99952 460 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 WDR18Q9BV38 432 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 NBPF3Q9H094 633 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.77■■□□□ 1.4
CDPF1-202ENST00000381037 CTDSPL2Q05D32 466 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 SNAPC2Q13487 334 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 STK11IPQ8N1F8 1099 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 ZNF280CQ8ND82 737 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 TBC1D2Q9BYX2 928 aa23.77■■□□□ 1.4
CDPF1-202ENST00000381037 SREBF2Q12772 1141 aa23.76■■□□□ 1.39
CDPF1-202ENST00000381037 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.76■■□□□ 1.39
CDPF1-202ENST00000381037 SPP2Q13103 211 aa23.75■■□□□ 1.39
CDPF1-202ENST00000381037 MAP4K1Q92918 833 aa23.75■■□□□ 1.39
CDPF1-202ENST00000381037 MKNK2Q9HBH9 465 aa23.75■■□□□ 1.39
CDPF1-202ENST00000381037 CABP5Q9NP86 173 aa23.75■■□□□ 1.39
CDPF1-202ENST00000381037 INCENPQ9NQS7 918 aa23.75■■□□□ 1.39
CDPF1-202ENST00000381037 CCL15-CCL14A0A0B4J2E2 113 aa23.74■■□□□ 1.39
CDPF1-202ENST00000381037 A0A0G2JLL6 359 aaPredicted RBP23.74■■□□□ 1.39
CDPF1-202ENST00000381037 IGF2BP3O00425 579 aaKnown RBP eCLIP23.74■■□□□ 1.39
CDPF1-202ENST00000381037 PRDM1O75626 825 aa23.74■■□□□ 1.39
CDPF1-202ENST00000381037 PDE4BQ07343 736 aa23.74■■□□□ 1.39
CDPF1-202ENST00000381037 SEPT2Q15019 361 aa23.74■■□□□ 1.39
CDPF1-202ENST00000381037 CCL15Q16663 113 aa23.74■■□□□ 1.39
CDPF1-202ENST00000381037 TMEM179Q6ZVK1 233 aa23.74■■□□□ 1.39
CDPF1-202ENST00000381037 PRRT2Q7Z6L0 340 aaPredicted RBP23.74■■□□□ 1.39
CDPF1-202ENST00000381037 ZNF287Q9HBT7 754 aa23.74■■□□□ 1.39
CDPF1-202ENST00000381037 TRIM75PA6NK02 468 aa23.73■■□□□ 1.39
CDPF1-202ENST00000381037 SLC3A2P08195 630 aaKnown RBP23.73■■□□□ 1.39
CDPF1-202ENST00000381037 CETPP11597 493 aa23.73■■□□□ 1.39
CDPF1-202ENST00000381037 HAND2P61296 217 aa23.73■■□□□ 1.39
CDPF1-202ENST00000381037 IFNL1Q8IU54 200 aa23.73■■□□□ 1.39
CDPF1-202ENST00000381037 SIAH1Q8IUQ4 282 aa23.73■■□□□ 1.39
CDPF1-202ENST00000381037 LSG1Q9H089 658 aaKnown RBP23.73■■□□□ 1.39
CDPF1-202ENST00000381037 AS3MTQ9HBK9 375 aa23.73■■□□□ 1.39
CDPF1-202ENST00000381037 RAB3GAP1Q15042 981 aa23.73■■□□□ 1.39
CDPF1-202ENST00000381037 CTNNA3Q9UI47 895 aa23.73■■□□□ 1.39
CDPF1-202ENST00000381037 MPHOSPH10O00566 681 aaKnown RBP23.72■■□□□ 1.39
CDPF1-202ENST00000381037 ZNF213O14771 459 aa23.72■■□□□ 1.39
CDPF1-202ENST00000381037 ORC4O43929 436 aa23.72■■□□□ 1.39
CDPF1-202ENST00000381037 SH3D19Q5HYK7 790 aa23.72■■□□□ 1.39
CDPF1-202ENST00000381037 TBC1D10CQ8IV04 446 aa23.72■■□□□ 1.39
CDPF1-202ENST00000381037 BACE1P56817 501 aa23.71■■□□□ 1.39
CDPF1-202ENST00000381037 RNF186Q9NXI6 227 aa23.71■■□□□ 1.39
CDPF1-202ENST00000381037 PTPRFP10586 1907 aa23.71■■□□□ 1.39
CDPF1-202ENST00000381037 MYH8P13535 1937 aa23.71■■□□□ 1.39
CDPF1-202ENST00000381037 GREB1LQ9C091 1923 aaPredicted RBP23.71■■□□□ 1.39
CDPF1-202ENST00000381037 IGKV6D-41A0A0C4DH26 115 aa23.7■■□□□ 1.39
CDPF1-202ENST00000381037 AKNAD1Q5T1N1 836 aa23.7■■□□□ 1.39
CDPF1-202ENST00000381037 GPAT2Q6NUI2 795 aa23.7■■□□□ 1.39
CDPF1-202ENST00000381037 CASC1Q6TDU7 716 aa23.7■■□□□ 1.39
CDPF1-202ENST00000381037 ZNF444Q8N0Y2 327 aaPredicted RBP23.7■■□□□ 1.39
CDPF1-202ENST00000381037 FAM43AQ8N2R8 423 aa23.7■■□□□ 1.39
CDPF1-202ENST00000381037 ACER1Q8TDN7 264 aa23.7■■□□□ 1.39
CDPF1-202ENST00000381037 STAG1Q8WVM7 1258 aa23.7■■□□□ 1.39
CDPF1-202ENST00000381037 GTF3C3Q9Y5Q9 886 aa23.7■■□□□ 1.39
CDPF1-202ENST00000381037 A0A1W2PRG0 241 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms