RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 NPR1P16066 1061 aa22.31■■□□□ 1.16
GMDS-201ENST00000380805 PDE4BQ07343 736 aa22.31■■□□□ 1.16
GMDS-201ENST00000380805 IFIT1BQ5T764 474 aaKnown RBP22.31■■□□□ 1.16
GMDS-201ENST00000380805 GOLPH3LQ9H4A5 285 aa22.31■■□□□ 1.16
GMDS-201ENST00000380805 GPR75-ASB3A0A0A6YYF3 556 aa22.3■■□□□ 1.16
GMDS-201ENST00000380805 PTGER2P43116 358 aa22.3■■□□□ 1.16
GMDS-201ENST00000380805 FUT2Q10981 343 aa22.3■■□□□ 1.16
GMDS-201ENST00000380805 CATIPQ7Z7H3 387 aa22.3■■□□□ 1.16
GMDS-201ENST00000380805 SH3RF3Q8TEJ3 882 aaPredicted RBP22.3■■□□□ 1.16
GMDS-201ENST00000380805 SGIP1Q9BQI5 828 aa22.3■■□□□ 1.16
GMDS-201ENST00000380805 GAKO14976 1311 aa22.3■■□□□ 1.16
GMDS-201ENST00000380805 SPTLC2O15270 562 aa22.29■■□□□ 1.16
GMDS-201ENST00000380805 PRDM1O75626 825 aa22.29■■□□□ 1.16
GMDS-201ENST00000380805 MMP1P03956 469 aa22.29■■□□□ 1.16
GMDS-201ENST00000380805 ME1P48163 572 aa22.29■■□□□ 1.16
GMDS-201ENST00000380805 EVX2Q03828 476 aa22.29■■□□□ 1.16
GMDS-201ENST00000380805 TYRO3Q06418 890 aa22.29■■□□□ 1.16
GMDS-201ENST00000380805 STK38Q15208 465 aa22.29■■□□□ 1.16
GMDS-201ENST00000380805 DIXDC1Q155Q3 683 aa22.29■■□□□ 1.16
GMDS-201ENST00000380805 CCDC73Q6ZRK6 1079 aa22.29■■□□□ 1.16
GMDS-201ENST00000380805 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.29■■□□□ 1.16
GMDS-201ENST00000380805 MCM9Q9NXL9 1143 aa22.29■■□□□ 1.16
GMDS-201ENST00000380805 PARP3Q9Y6F1 533 aa22.29■■□□□ 1.16
GMDS-201ENST00000380805 CYP2D6P10635 497 aa22.28■■□□□ 1.16
GMDS-201ENST00000380805 GUCY1A2P33402 732 aa22.28■■□□□ 1.16
GMDS-201ENST00000380805 SLC39A14Q15043 492 aa22.28■■□□□ 1.16
GMDS-201ENST00000380805 MRPS27Q92552 414 aaKnown RBP22.28■■□□□ 1.16
GMDS-201ENST00000380805 NOL10Q9BSC4 688 aaKnown RBP22.28■■□□□ 1.16
GMDS-201ENST00000380805 MRVI1Q9Y6F6 885 aa22.28■■□□□ 1.16
GMDS-201ENST00000380805 PDE6BP35913 854 aa22.28■■□□□ 1.16
GMDS-201ENST00000380805 CAMK4Q16566 473 aa22.28■■□□□ 1.16
GMDS-201ENST00000380805 NUP133Q8WUM0 1156 aa22.28■■□□□ 1.16
GMDS-201ENST00000380805 ANKS1AQ92625 1134 aa22.28■■□□□ 1.16
GMDS-201ENST00000380805 COA1Q9GZY4 146 aa22.28■■□□□ 1.16
GMDS-201ENST00000380805 FOXP1Q9H334 677 aaPredicted RBP22.28■■□□□ 1.16
GMDS-201ENST00000380805 SUGT1Q9Y2Z0 365 aa22.28■■□□□ 1.16
GMDS-201ENST00000380805 UBE2Q2LH0YL09 131 aa22.27■■□□□ 1.16
GMDS-201ENST00000380805 PPP6R2O75170 966 aa22.27■■□□□ 1.16
GMDS-201ENST00000380805 USP17L8P0C7I0 530 aa22.27■■□□□ 1.16
GMDS-201ENST00000380805 SLF2Q8IX21 1173 aa22.27■■□□□ 1.16
GMDS-201ENST00000380805 FMR1NBQ8N0W7 255 aaPredicted RBP22.27■■□□□ 1.16
GMDS-201ENST00000380805 FAM200AQ8TCP9 573 aa22.27■■□□□ 1.16
GMDS-201ENST00000380805 MAP3K14Q99558 947 aa22.27■■□□□ 1.16
GMDS-201ENST00000380805 RRAGDQ9NQL2 400 aaPredicted RBP22.27■■□□□ 1.16
GMDS-201ENST00000380805 MYH1P12882 1939 aa22.27■■□□□ 1.16
GMDS-201ENST00000380805 ESPNB1AK53 854 aa22.26■■□□□ 1.15
GMDS-201ENST00000380805 PRPF3O43395 683 aaKnown RBP22.26■■□□□ 1.15
GMDS-201ENST00000380805 CAVIN2O95810 425 aa22.26■■□□□ 1.15
GMDS-201ENST00000380805 PLCG2P16885 1265 aa22.26■■□□□ 1.15
GMDS-201ENST00000380805 ALDH1B1P30837 517 aa22.26■■□□□ 1.15
GMDS-201ENST00000380805 USP5P45974 858 aa22.26■■□□□ 1.15
GMDS-201ENST00000380805 PTPAQ15257 358 aa22.26■■□□□ 1.15
GMDS-201ENST00000380805 AXDND1Q5T1B0 1012 aaPredicted RBP22.26■■□□□ 1.15
GMDS-201ENST00000380805 FSIP1Q8NA03 581 aa22.26■■□□□ 1.15
GMDS-201ENST00000380805 SPON1Q9HCB6 807 aa22.26■■□□□ 1.15
GMDS-201ENST00000380805 MFSD14BQ5SR56 506 aa22.26■■□□□ 1.15
GMDS-201ENST00000380805 RCSD1Q6JBY9 416 aa22.26■■□□□ 1.15
GMDS-201ENST00000380805 NOSTRINQ8IVI9 506 aa22.26■■□□□ 1.15
GMDS-201ENST00000380805 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.26■■□□□ 1.15
GMDS-201ENST00000380805 C6orf229H3BNL8 230 aa22.25■■□□□ 1.15
GMDS-201ENST00000380805 POLD1P28340 1107 aa22.25■■□□□ 1.15
GMDS-201ENST00000380805 BTDP43251 543 aa22.25■■□□□ 1.15
GMDS-201ENST00000380805 SF3A1Q15459 793 aaKnown RBP22.25■■□□□ 1.15
GMDS-201ENST00000380805 TMTC3Q6ZXV5 915 aa22.25■■□□□ 1.15
GMDS-201ENST00000380805 DGKHQ86XP1 1220 aa22.25■■□□□ 1.15
GMDS-201ENST00000380805 AMOTL1Q8IY63 956 aa22.25■■□□□ 1.15
GMDS-201ENST00000380805 CKAP2LQ8IYA6 745 aa22.25■■□□□ 1.15
GMDS-201ENST00000380805 TCP11L1Q9NUJ3 509 aa22.25■■□□□ 1.15
GMDS-201ENST00000380805 FAM237AA0A1B0GTK4 181 aa22.24■■□□□ 1.15
GMDS-201ENST00000380805 KINO60870 393 aaKnown RBP22.24■■□□□ 1.15
GMDS-201ENST00000380805 SAFBQ15424 915 aaKnown RBP eCLIP22.24■■□□□ 1.152e-6■■□□□ 14.2
GMDS-201ENST00000380805 PKN1Q16512 942 aa22.24■■□□□ 1.15
GMDS-201ENST00000380805 CCDC178Q5BJE1 867 aa22.24■■□□□ 1.15
GMDS-201ENST00000380805 MASTLQ96GX5 879 aa22.24■■□□□ 1.15
GMDS-201ENST00000380805 MORC2Q9Y6X9 1032 aaPredicted RBP22.24■■□□□ 1.15
GMDS-201ENST00000380805 ZNF646O15015 1829 aaPredicted RBP22.24■■□□□ 1.15
GMDS-201ENST00000380805 TSPY2A6NKD2 308 aa22.23■■□□□ 1.15
GMDS-201ENST00000380805 CMA1P23946 247 aa22.23■■□□□ 1.15
GMDS-201ENST00000380805 RHBDL3P58872 404 aa22.23■■□□□ 1.15
GMDS-201ENST00000380805 GNL2Q13823 731 aaKnown RBP22.23■■□□□ 1.15
GMDS-201ENST00000380805 DIS3L2Q8IYB7 885 aaKnown RBP22.23■■□□□ 1.15
GMDS-201ENST00000380805 JMYQ8N9B5 988 aa22.23■■□□□ 1.15
GMDS-201ENST00000380805 CNTNAP5Q8WYK1 1306 aa22.23■■□□□ 1.15
GMDS-201ENST00000380805 FAM47AQ5JRC9 791 aa22.23■■□□□ 1.15
GMDS-201ENST00000380805 TGFBRAP1Q8WUH2 860 aa22.23■■□□□ 1.15
GMDS-201ENST00000380805 SASS6Q6UVJ0 657 aa22.22■■□□□ 1.15
GMDS-201ENST00000380805 MPNDQ8N594 471 aa22.22■■□□□ 1.15
GMDS-201ENST00000380805 SNED1Q8TER0 1413 aa22.21■■□□□ 1.15
GMDS-201ENST00000380805 BTBD18B2RXH4 712 aa22.21■■□□□ 1.15
GMDS-201ENST00000380805 NMT2O60551 498 aa22.21■■□□□ 1.15
GMDS-201ENST00000380805 PLEKHA8P1O95397 391 aa22.21■■□□□ 1.15
GMDS-201ENST00000380805 CLCN1P35523 988 aa22.21■■□□□ 1.15
GMDS-201ENST00000380805 RILPL1Q5EBL4 403 aa22.21■■□□□ 1.15
GMDS-201ENST00000380805 ZSCAN30Q86W11 494 aa22.21■■□□□ 1.15
GMDS-201ENST00000380805 CMTR1Q8N1G2 835 aaKnown RBP22.21■■□□□ 1.15
GMDS-201ENST00000380805 CTCFLQ8NI51 663 aaPredicted RBP22.21■■□□□ 1.15
GMDS-201ENST00000380805 FLT1P17948 1338 aa22.2■■□□□ 1.15
GMDS-201ENST00000380805 WDHD1O75717 1129 aaPredicted RBP22.2■■□□□ 1.14
GMDS-201ENST00000380805 XBP1P17861 261 aa22.2■■□□□ 1.14
GMDS-201ENST00000380805 NDUFA8P51970 172 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms