RNA–Protein interactions for RNA: ENST00000379697.7

SH3KBP1-201, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 5 BASIC

Gene SH3KBP1, Length 1,944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-201ENST00000379697 LTBP3Q9NS15 1303 aa17.45■□□□□ 0.38
SH3KBP1-201ENST00000379697 PTMSP20962 102 aa17.45■□□□□ 0.38
SH3KBP1-201ENST00000379697 CFAP100Q494V2 611 aa17.45■□□□□ 0.38
SH3KBP1-201ENST00000379697 ZNF444Q8N0Y2 327 aaPredicted RBP17.45■□□□□ 0.38
SH3KBP1-201ENST00000379697 H3BQV1 296 aa17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 TSPY3P0CV98 308 aa17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 TSPY8P0CW00 308 aa17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 CACNB3P54284 484 aa17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 CXCL9Q07325 125 aa17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 NTRK3Q16288 839 aa17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 RTN1Q16799 776 aa17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 FOXD4L6Q3SYB3 417 aaPredicted RBP17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 IFFO2Q5TF58 517 aa17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 FOXD4L3Q6VB84 417 aaPredicted RBP17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 CATIPQ7Z7H3 387 aa17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 IDI2Q9BXS1 227 aa17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 ORC3Q9UBD5 711 aaPredicted RBP17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 ZBTB12Q9Y330 459 aaPredicted RBP17.44■□□□□ 0.38
SH3KBP1-201ENST00000379697 GABPAQ06546 454 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 OGFOD1Q8N543 542 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 FANCBQ8NB91 859 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 AGBL3Q8NEM8 1001 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 NUP133Q8WUM0 1156 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 IL17RBQ9NRM6 502 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 HDAC9Q9UKV0 1011 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 CCDC196A0A1B0GTZ2 297 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 RCSD1Q6JBY9 416 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 FERMT3Q86UX7 667 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 TCP11L1Q9NUJ3 509 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 FAM198AQ9UFP1 575 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 SERPINB13Q9UIV8 391 aa17.43■□□□□ 0.38
SH3KBP1-201ENST00000379697 ARFGEF1Q9Y6D6 1849 aa17.42■□□□□ 0.38
SH3KBP1-201ENST00000379697 DDAH1O94760 285 aa17.42■□□□□ 0.38
SH3KBP1-201ENST00000379697 HLA-DOAP06340 250 aa17.42■□□□□ 0.38
SH3KBP1-201ENST00000379697 RASSF7Q02833 373 aa17.42■□□□□ 0.38
SH3KBP1-201ENST00000379697 TROAPQ12815 778 aa17.42■□□□□ 0.38
SH3KBP1-201ENST00000379697 PPP2R5BQ15173 497 aa17.42■□□□□ 0.38
SH3KBP1-201ENST00000379697 CCDC178Q5BJE1 867 aa17.42■□□□□ 0.38
SH3KBP1-201ENST00000379697 CIAPIN1Q6FI81 312 aa17.42■□□□□ 0.38
SH3KBP1-201ENST00000379697 DGKHQ86XP1 1220 aa17.42■□□□□ 0.38
SH3KBP1-201ENST00000379697 PRMT6Q96LA8 375 aaPredicted RBP17.42■□□□□ 0.38
SH3KBP1-201ENST00000379697 TDRD3Q9H7E2 651 aaKnown RBP17.42■□□□□ 0.38
SH3KBP1-201ENST00000379697 SPDYE2BA6NHP3 402 aa17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 SPDYE6P0CI01 402 aa17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 CALM1P0DP23 149 aa17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 CALM2P0DP24 149 aa17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 CALM3P0DP25 149 aa17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 IFNAR1P17181 557 aa17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 FOSBP53539 338 aa17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 TCP10Q12799 353 aa17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 ZFPM1Q8IX07 1006 aa17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 PHKBQ93100 1093 aa17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 ANKS1AQ92625 1134 aa17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 EHD4Q9H223 541 aa17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 DHX36Q9H2U1 1008 aaKnown RBP17.41■□□□□ 0.38
SH3KBP1-201ENST00000379697 TRAK2O60296 914 aa17.4■□□□□ 0.38
SH3KBP1-201ENST00000379697 DLGAP5Q15398 846 aa17.4■□□□□ 0.38
SH3KBP1-201ENST00000379697 NEDD1Q8NHV4 660 aa17.4■□□□□ 0.38
SH3KBP1-201ENST00000379697 LMBRD1Q9NUN5 540 aa17.4■□□□□ 0.38
SH3KBP1-201ENST00000379697 SWAP70Q9UH65 585 aa17.4■□□□□ 0.38
SH3KBP1-201ENST00000379697 STK36Q9NRP7 1315 aa17.4■□□□□ 0.38
SH3KBP1-201ENST00000379697 PLIN4Q96Q06 1357 aa17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 TNIP1Q15025 636 aa17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 C8orf76Q96K31 380 aa17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 FHDC1Q9C0D6 1143 aaPredicted RBP17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 KAT14Q9H8E8 782 aa17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 ENTPD3O75355 529 aa17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 FMNL1O95466 1100 aaPredicted RBP17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 PRELPP51888 382 aa17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 SSRP1Q08945 709 aaKnown RBP17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 RESTQ13127 1097 aa17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 SLC26A6Q9BXS9 759 aa17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 RBM28Q9NW13 759 aaKnown RBP17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 TMOD2Q9NZR1 351 aa17.39■□□□□ 0.37
SH3KBP1-201ENST00000379697 DDTLA6NHG4 134 aaPredicted RBP17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 PRPF40AO75400 957 aaKnown RBP17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 SHMT1P34896 483 aa17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 GUCY1B3Q02153 619 aa17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 DNM1Q05193 864 aaKnown RBP17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 TRIM22Q8IYM9 498 aa17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 PNMA1Q8ND90 353 aa17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 FBXO18Q8NFZ0 1043 aa17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 ALG1Q9BT22 464 aa17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 ZSCAN16Q9H4T2 348 aaPredicted RBP17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 STX8Q9UNK0 236 aa17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 CNPY2Q9Y2B0 182 aa17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 COL2A1P02458 1487 aaPredicted RBP17.38■□□□□ 0.37
SH3KBP1-201ENST00000379697 ATRNL1Q5VV63 1379 aa17.37■□□□□ 0.37
SH3KBP1-201ENST00000379697 NCLP19338 710 aaKnown RBP17.37■□□□□ 0.37
SH3KBP1-201ENST00000379697 SKOR2Q2VWA4 1001 aaPredicted RBP17.37■□□□□ 0.37
SH3KBP1-201ENST00000379697 SH3BP5LQ7L8J4 393 aa17.37■□□□□ 0.37
SH3KBP1-201ENST00000379697 NBPF11Q86T75 865 aa17.37■□□□□ 0.37
SH3KBP1-201ENST00000379697 ZSCAN29Q8IWY8 852 aaPredicted RBP17.37■□□□□ 0.37
SH3KBP1-201ENST00000379697 CMTR1Q8N1G2 835 aaKnown RBP17.37■□□□□ 0.37
SH3KBP1-201ENST00000379697 CRACR2BQ8N4Y2 399 aaPredicted RBP17.37■□□□□ 0.37
SH3KBP1-201ENST00000379697 MTMR14Q8NCE2 650 aa17.37■□□□□ 0.37
SH3KBP1-201ENST00000379697 CTCFLQ8NI51 663 aaPredicted RBP17.37■□□□□ 0.37
SH3KBP1-201ENST00000379697 AIFM3Q96NN9 605 aa17.37■□□□□ 0.37
SH3KBP1-201ENST00000379697 GDPD2Q9HCC8 539 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms