RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ANKRD35Q8N283 1001 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 UTP11Q9Y3A2 253 aaKnown RBP15.69■□□□□ 0.1
TRIM13-202ENST00000378182 IQUBQ8NA54 791 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 DEPTORQ8TB45 409 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 POLR2DO15514 142 aaKnown RBP15.69■□□□□ 0.1
TRIM13-202ENST00000378182 TBC1D10BQ4KMP7 808 aaPredicted RBP15.69■□□□□ 0.1
TRIM13-202ENST00000378182 CNNM4Q6P4Q7 775 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 CCDC186Q7Z3E2 898 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 CCDC170Q8IYT3 715 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 DCLK2Q8N568 766 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 WDR66Q8TBY9 1149 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 MAGED2Q9UNF1 606 aaPredicted RBP15.69■□□□□ 0.1
TRIM13-202ENST00000378182 UHRF1BP1LA0JNW5 1464 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 SDCCAG8Q86SQ7 713 aaPredicted RBP15.69■□□□□ 0.1
TRIM13-202ENST00000378182 DKC1O60832 514 aaKnown RBP eCLIP15.69■□□□□ 0.1
TRIM13-202ENST00000378182 CCDC122Q5T0U0 273 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 KIAA0825Q8IV33 1275 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 PPP1R16BQ96T49 567 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 STIM2Q9P246 746 aa15.69■□□□□ 0.1
TRIM13-202ENST00000378182 DTNBO60941 627 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 CEP57Q86XR8 500 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 SNX29Q8TEQ0 813 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 PSMB7Q99436 277 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 LUC7L2Q9Y383 392 aaKnown RBP15.68■□□□□ 0.1
TRIM13-202ENST00000378182 ALDH1L1O75891 902 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 SLC12A2P55011 1212 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 TMTC4Q5T4D3 741 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 ZNF365Q70YC5 407 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 INTS8Q75QN2 995 aaKnown RBP15.68■□□□□ 0.1
TRIM13-202ENST00000378182 MRPL50Q8N5N7 158 aaKnown RBP15.68■□□□□ 0.1
TRIM13-202ENST00000378182 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRIM13-202ENST00000378182 KDM5BQ9UGL1 1544 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 WDR46O15213 610 aaKnown RBP15.68■□□□□ 0.1
TRIM13-202ENST00000378182 TBC1D8O95759 1140 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 F13A1P00488 732 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 ZNF131P52739 623 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 OTUD6AQ7L8S5 288 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 AFAP1L2Q8N4X5 818 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 FAM184BQ9ULE4 1060 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 EXOC3O60645 756 aa15.68■□□□□ 0.1
TRIM13-202ENST00000378182 GABPB2Q8TAK5 448 aaPredicted RBP15.68■□□□□ 0.1
TRIM13-202ENST00000378182 CYP2J2P51589 502 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 SND1Q7KZF4 910 aaKnown RBP eCLIP15.67■□□□□ 0.1
TRIM13-202ENST00000378182 CCDC26Q8TAB7 109 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 MICAL1Q8TDZ2 1067 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 C14orf93Q9H972 538 aaKnown RBP15.67■□□□□ 0.1
TRIM13-202ENST00000378182 PAXBP1Q9Y5B6 917 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 SETDB1Q15047 1291 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 TAB3Q8N5C8 712 aaPredicted RBP15.67■□□□□ 0.1
TRIM13-202ENST00000378182 PHKBQ93100 1093 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 P4HA1P13674 534 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 BMP2KLQ5H9B9 411 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 UBL4BQ8N7F7 174 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 GANCQ8TET4 914 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 TRIM37O94972 964 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 ATF5Q9Y2D1 282 aaPredicted RBP15.67■□□□□ 0.1
TRIM13-202ENST00000378182 RNASELQ05823 741 aaKnown RBP15.67■□□□□ 0.1
TRIM13-202ENST00000378182 PPP2R5AQ15172 486 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 ERCC6LQ2NKX8 1250 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 RPS6KC1Q96S38 1066 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 ANKRD36BQ8N2N9 1353 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 CLRN2A0PK11 232 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 HOXC9P31274 260 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 ZBTB33Q86T24 672 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 CMTR1Q8N1G2 835 aaKnown RBP15.67■□□□□ 0.1
TRIM13-202ENST00000378182 STMN2Q93045 179 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 NCOA5Q9HCD5 579 aaKnown RBP15.67■□□□□ 0.1
TRIM13-202ENST00000378182 NKIRAS1Q9NYS0 192 aa15.67■□□□□ 0.1
TRIM13-202ENST00000378182 THRAP3Q9Y2W1 955 aaKnown RBP15.67■□□□□ 0.1
TRIM13-202ENST00000378182 FOXD4Q12950 439 aaPredicted RBP15.66■□□□□ 0.1
TRIM13-202ENST00000378182 SKIV2LQ15477 1246 aaKnown RBP15.66■□□□□ 0.1
TRIM13-202ENST00000378182 HERC4Q5GLZ8 1057 aaPredicted RBP15.66■□□□□ 0.1
TRIM13-202ENST00000378182 SH2D4BQ5SQS7 431 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 NXNQ6DKJ4 435 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 SAMD15Q9P1V8 674 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 PTPROQ16827 1216 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 DHX32Q7L7V1 743 aaKnown RBP15.66■□□□□ 0.1
TRIM13-202ENST00000378182 MICALL1Q8N3F8 863 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 AKT3Q9Y243 479 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 TBC1D8BQ0IIM8 1120 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 SRGAP1Q7Z6B7 1085 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 LRRC43Q8N309 656 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 YTHDC2Q9H6S0 1430 aaKnown RBP15.66■□□□□ 0.1
TRIM13-202ENST00000378182 ASIC3Q9UHC3 531 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 LRRC47Q8N1G4 583 aaKnown RBP15.66■□□□□ 0.1
TRIM13-202ENST00000378182 CALCOCO1Q9P1Z2 691 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 GAS7O60861 476 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 TNNC1P63316 161 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 MIER3Q7Z3K6 550 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 SCYL1Q96KG9 808 aa15.66■□□□□ 0.1
TRIM13-202ENST00000378182 PLCD1P51178 756 aa15.65■□□□□ 0.1
TRIM13-202ENST00000378182 TRIM50Q86XT4 487 aa15.65■□□□□ 0.1
TRIM13-202ENST00000378182 RABEP2Q9H5N1 569 aa15.65■□□□□ 0.1
TRIM13-202ENST00000378182 POMGNT1Q8WZA1 660 aa15.65■□□□□ 0.1
TRIM13-202ENST00000378182 XPAP23025 273 aaPredicted RBP15.65■□□□□ 0.1
TRIM13-202ENST00000378182 GNL1P36915 607 aaPredicted RBP15.65■□□□□ 0.1
TRIM13-202ENST00000378182 POLKQ9UBT6 870 aa15.65■□□□□ 0.1
TRIM13-202ENST00000378182 TYRO3Q06418 890 aa15.65■□□□□ 0.1
TRIM13-202ENST00000378182 SUDS3Q9H7L9 328 aaPredicted RBP15.65■□□□□ 0.1
TRIM13-202ENST00000378182 OLA1Q9NTK5 396 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms