RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 MTMR2Q13614 643 aa23.44■■□□□ 1.34
CBWD3-204ENST00000377349 DEFB118Q96PH6 123 aa23.44■■□□□ 1.34
CBWD3-204ENST00000377349 NOL10Q9BSC4 688 aaKnown RBP23.44■■□□□ 1.34
CBWD3-204ENST00000377349 BCL11AQ9H165 835 aa23.44■■□□□ 1.34
CBWD3-204ENST00000377349 AS3MTQ9HBK9 375 aa23.44■■□□□ 1.34
CBWD3-204ENST00000377349 PALD1Q9ULE6 856 aa23.44■■□□□ 1.34
CBWD3-204ENST00000377349 ZBTB7BO15156 539 aaPredicted RBP23.43■■□□□ 1.34
CBWD3-204ENST00000377349 BACE1P56817 501 aa23.43■■□□□ 1.34
CBWD3-204ENST00000377349 PABPC4Q13310 644 aaKnown RBP eCLIP23.43■■□□□ 1.34
CBWD3-204ENST00000377349 EAF2Q96CJ1 260 aaPredicted RBP23.43■■□□□ 1.34
CBWD3-204ENST00000377349 MORF4L1Q9UBU8 362 aa23.43■■□□□ 1.34
CBWD3-204ENST00000377349 TAOK2Q9UL54 1235 aa23.43■■□□□ 1.34
CBWD3-204ENST00000377349 PEX10O60683 326 aa23.42■■□□□ 1.34
CBWD3-204ENST00000377349 ASNSP08243 561 aa23.42■■□□□ 1.34
CBWD3-204ENST00000377349 FOXP4Q8IVH2 680 aaPredicted RBP23.42■■□□□ 1.34
CBWD3-204ENST00000377349 IGSF3O75054 1194 aa23.42■■□□□ 1.34
CBWD3-204ENST00000377349 GDF11O95390 407 aa23.42■■□□□ 1.34
CBWD3-204ENST00000377349 HOXA7P31268 230 aaPredicted RBP23.42■■□□□ 1.34
CBWD3-204ENST00000377349 DYNLL1P63167 89 aaKnown RBP23.42■■□□□ 1.34
CBWD3-204ENST00000377349 CCDC8Q9H0W5 538 aaPredicted RBP23.42■■□□□ 1.34
CBWD3-204ENST00000377349 TXNRD2Q9NNW7 524 aa23.42■■□□□ 1.34
CBWD3-204ENST00000377349 DNAH12Q6ZR08 3092 aa23.41■■□□□ 1.34
CBWD3-204ENST00000377349 NAV1Q8NEY1 1877 aa23.41■■□□□ 1.34
CBWD3-204ENST00000377349 FRMPD3Q5JV73 1810 aa23.41■■□□□ 1.34
CBWD3-204ENST00000377349 COL6A3P12111 3177 aa23.41■■□□□ 1.34
CBWD3-204ENST00000377349 TFRCP02786 760 aaKnown RBP23.41■■□□□ 1.34
CBWD3-204ENST00000377349 TRIM32Q13049 653 aa23.41■■□□□ 1.34
CBWD3-204ENST00000377349 POTEEQ6S8J3 1075 aa23.41■■□□□ 1.34
CBWD3-204ENST00000377349 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.41■■□□□ 1.34
CBWD3-204ENST00000377349 SAP30BPQ9UHR5 308 aaKnown RBP23.41■■□□□ 1.34
CBWD3-204ENST00000377349 ZBTB21Q9ULJ3 1066 aa23.41■■□□□ 1.34
CBWD3-204ENST00000377349 HMGCRP04035 888 aa23.4■■□□□ 1.34
CBWD3-204ENST00000377349 CAPN2P17655 700 aa23.4■■□□□ 1.34
CBWD3-204ENST00000377349 DIS3LQ8TF46 1054 aaKnown RBP23.4■■□□□ 1.34
CBWD3-204ENST00000377349 P2RX7Q99572 595 aaKnown RBP23.4■■□□□ 1.34
CBWD3-204ENST00000377349 NDUFB9Q9Y6M9 179 aa23.4■■□□□ 1.34
CBWD3-204ENST00000377349 CEP85Q6P2H3 762 aa23.39■■□□□ 1.33
CBWD3-204ENST00000377349 GINM1Q9NU53 330 aa23.39■■□□□ 1.33
CBWD3-204ENST00000377349 EXOC6BQ9Y2D4 811 aa23.39■■□□□ 1.33
CBWD3-204ENST00000377349 C19orf81C9J6K1 198 aa23.38■■□□□ 1.33
CBWD3-204ENST00000377349 MS4A1P11836 297 aa23.38■■□□□ 1.33
CBWD3-204ENST00000377349 CYP7A1P22680 504 aa23.38■■□□□ 1.33
CBWD3-204ENST00000377349 HERVK_113P62684 666 aa23.38■■□□□ 1.33
CBWD3-204ENST00000377349 IRX3P78415 501 aaPredicted RBP23.38■■□□□ 1.33
CBWD3-204ENST00000377349 TRIB2Q92519 343 aa23.38■■□□□ 1.33
CBWD3-204ENST00000377349 PAWRQ96IZ0 340 aaKnown RBP23.38■■□□□ 1.33
CBWD3-204ENST00000377349 NR2E3Q9Y5X4 410 aa23.38■■□□□ 1.33
CBWD3-204ENST00000377349 MYH8P13535 1937 aa23.37■■□□□ 1.33
CBWD3-204ENST00000377349 USP17L10C9JJH3 530 aa23.37■■□□□ 1.33
CBWD3-204ENST00000377349 APBB1O00213 710 aa23.37■■□□□ 1.33
CBWD3-204ENST00000377349 MNX1P50219 401 aaPredicted RBP23.37■■□□□ 1.33
CBWD3-204ENST00000377349 CRACR2BQ8N4Y2 399 aaPredicted RBP23.37■■□□□ 1.33
CBWD3-204ENST00000377349 ANTXR1Q9H6X2 564 aa23.37■■□□□ 1.33
CBWD3-204ENST00000377349 EMILIN3Q9NT22 766 aa23.37■■□□□ 1.33
CBWD3-204ENST00000377349 TMOD4Q9NZQ9 345 aa23.37■■□□□ 1.33
CBWD3-204ENST00000377349 RBPJLQ9UBG7 517 aa23.37■■□□□ 1.33
CBWD3-204ENST00000377349 COG6Q9Y2V7 657 aa23.37■■□□□ 1.33
CBWD3-204ENST00000377349 MIGA1Q8NAN2 632 aa23.36■■□□□ 1.33
CBWD3-204ENST00000377349 RCAN3Q9UKA8 241 aa23.36■■□□□ 1.33
CBWD3-204ENST00000377349 IDH1O75874 414 aaKnown RBP23.35■■□□□ 1.33
CBWD3-204ENST00000377349 Q3C1V9 767 aa23.35■■□□□ 1.33
CBWD3-204ENST00000377349 MAP3K21Q5TCX8 1036 aa23.35■■□□□ 1.33
CBWD3-204ENST00000377349 TATDN1Q6P1N9 297 aa23.35■■□□□ 1.33
CBWD3-204ENST00000377349 RPTORQ8N122 1335 aa23.35■■□□□ 1.33
CBWD3-204ENST00000377349 RLFQ13129 1914 aa23.35■■□□□ 1.33
CBWD3-204ENST00000377349 EVI5O60447 810 aa23.34■■□□□ 1.33
CBWD3-204ENST00000377349 GH2P01242 217 aa23.34■■□□□ 1.33
CBWD3-204ENST00000377349 HLA-DOAP06340 250 aa23.34■■□□□ 1.33
CBWD3-204ENST00000377349 MAGEB6Q8N7X4 407 aa23.34■■□□□ 1.33
CBWD3-204ENST00000377349 GPRC5AQ8NFJ5 357 aa23.34■■□□□ 1.33
CBWD3-204ENST00000377349 TRIM34Q9BYJ4 488 aa23.34■■□□□ 1.33
CBWD3-204ENST00000377349 ANKLE1Q8NAG6 615 aa23.33■■□□□ 1.33
CBWD3-204ENST00000377349 USP6NLQ92738 828 aa23.33■■□□□ 1.33
CBWD3-204ENST00000377349 PORCNQ9H237 461 aa23.33■■□□□ 1.33
CBWD3-204ENST00000377349 BAZ2AQ9UIF9 1905 aaKnown RBP23.33■■□□□ 1.33
CBWD3-204ENST00000377349 CYP2B6P20813 491 aa23.33■■□□□ 1.32
CBWD3-204ENST00000377349 ERVK-9P63128 1117 aa23.33■■□□□ 1.32
CBWD3-204ENST00000377349 ERVK-24P63145 666 aa23.33■■□□□ 1.32
CBWD3-204ENST00000377349 NECAB2Q7Z6G3 386 aa23.33■■□□□ 1.32
CBWD3-204ENST00000377349 AACSQ86V21 672 aa23.33■■□□□ 1.32
CBWD3-204ENST00000377349 C12orf42Q96LP6 360 aa23.33■■□□□ 1.32
CBWD3-204ENST00000377349 EHD4Q9H223 541 aa23.33■■□□□ 1.32
CBWD3-204ENST00000377349 HMX1Q9NP08 348 aaPredicted RBP23.33■■□□□ 1.32
CBWD3-204ENST00000377349 MYH7P12883 1935 aa23.33■■□□□ 1.32
CBWD3-204ENST00000377349 XRCC5P13010 732 aaKnown RBP23.32■■□□□ 1.32
CBWD3-204ENST00000377349 RIOK1Q9BRS2 568 aaKnown RBP23.32■■□□□ 1.32
CBWD3-204ENST00000377349 DDX19BQ9UMR2 479 aa23.32■■□□□ 1.32
CBWD3-204ENST00000377349 PARP14Q460N5 1801 aa23.31■■□□□ 1.32
CBWD3-204ENST00000377349 LAMA2P24043 3122 aaKnown RBP23.31■■□□□ 1.32
CBWD3-204ENST00000377349 USP17L2Q6R6M4 530 aa23.31■■□□□ 1.32
CBWD3-204ENST00000377349 CERS3Q8IU89 383 aa23.31■■□□□ 1.32
CBWD3-204ENST00000377349 ERC1Q8IUD2 1116 aa23.31■■□□□ 1.32
CBWD3-204ENST00000377349 SOCS4Q8WXH5 440 aa23.31■■□□□ 1.32
CBWD3-204ENST00000377349 NUDT12Q9BQG2 462 aa23.31■■□□□ 1.32
CBWD3-204ENST00000377349 IL1RAPL2Q9NP60 686 aa23.31■■□□□ 1.32
CBWD3-204ENST00000377349 SERPINB13Q9UIV8 391 aa23.31■■□□□ 1.32
CBWD3-204ENST00000377349 OGDHLQ9ULD0 1010 aa23.31■■□□□ 1.32
CBWD3-204ENST00000377349 CNMDO75829 334 aa23.3■■□□□ 1.32
CBWD3-204ENST00000377349 PRKAR2AP13861 404 aaKnown RBP23.3■■□□□ 1.32
CBWD3-204ENST00000377349 USP5P45974 858 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms