RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 NLRP10Q86W26 655 aa20.07■□□□□ 0.8
CLSTN1-202ENST00000377298 IRX3P78415 501 aaPredicted RBP20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 PRKG1Q13976 671 aa20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 ME3Q16798 604 aa20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 BCCIPQ9P287 314 aaKnown RBP eCLIP20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 DNM3Q9UQ16 869 aa20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 FSD2A1L4K1 749 aa20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 HS1BP3Q53T59 392 aa20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 ZSWIM6Q9HCJ5 1215 aa20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 VPS54Q9P1Q0 977 aa20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 CSADQ9Y600 493 aa20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 PRAMEF22A3QJZ6 481 aa20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 NOC4LQ9BVI4 516 aaKnown RBP20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 OSBPL3Q9H4L5 887 aa20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 CCDC169A6NNP5 214 aa20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 SMC1AQ14683 1233 aaKnown RBP20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 BBXQ8WY36 941 aaPredicted RBP20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 SRRTQ9BXP5 876 aaKnown RBP20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 CTNND2Q9UQB3 1225 aa20.06■□□□□ 0.8
CLSTN1-202ENST00000377298 CTAGE9A4FU28 777 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 DPY19L2Q6NUT2 758 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 CDC37L1Q7L3B6 337 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 CDC42BPGQ6DT37 1551 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 NCAPD2Q15021 1401 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 CETN3O15182 167 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 FANCBQ8NB91 859 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 TNKSO95271 1327 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 SMCO2A6NFE2 343 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 ZNF202O95125 648 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 LRRC45Q96CN5 670 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 RASAL2Q9UJF2 1139 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 CALUO43852 315 aaPredicted RBP20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 TBC1D8BQ0IIM8 1120 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 ADGRL3Q9HAR2 1447 aa20.05■□□□□ 0.8
CLSTN1-202ENST00000377298 SCNN1DP51172 638 aa20.04■□□□□ 0.8
CLSTN1-202ENST00000377298 PNMA1Q8ND90 353 aa20.04■□□□□ 0.8
CLSTN1-202ENST00000377298 PFKFB2O60825 505 aa20.04■□□□□ 0.8
CLSTN1-202ENST00000377298 ADORA1P30542 326 aa20.04■□□□□ 0.8
CLSTN1-202ENST00000377298 TRIM14Q14142 442 aa20.04■□□□□ 0.8
CLSTN1-202ENST00000377298 WDR44Q5JSH3 913 aa20.04■□□□□ 0.8
CLSTN1-202ENST00000377298 GPHNQ9NQX3 736 aaPredicted RBP20.04■□□□□ 0.8
CLSTN1-202ENST00000377298 LMAN1P49257 510 aa20.04■□□□□ 0.8
CLSTN1-202ENST00000377298 RGS22Q8NE09 1264 aa20.04■□□□□ 0.8
CLSTN1-202ENST00000377298 CERKLQ49MI3 558 aaPredicted RBP20.04■□□□□ 0.8
CLSTN1-202ENST00000377298 PNMA2Q9UL42 364 aa20.04■□□□□ 0.8
CLSTN1-202ENST00000377298 NOD1Q9Y239 953 aa20.04■□□□□ 0.8
CLSTN1-202ENST00000377298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 VWA3BQ502W6 1294 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 ZMYM1Q5SVZ6 1142 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 COMMD10Q9Y6G5 202 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 MED23Q9ULK4 1368 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 STRN3Q13033 797 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 BIRC3Q13489 604 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 KIFC2Q96AC6 838 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 AZI2Q9H6S1 392 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 AKR1B15C9JRZ8 316 aaPredicted RBP20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 DDAH1O94760 285 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 ERFEQ4G0M1 354 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 CTR9Q6PD62 1173 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 MAATS1Q7Z4T9 603 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 CSGALNACT2Q8N6G5 542 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 CEP112Q8N8E3 955 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 ZMYM6O95789 1325 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 RAPGEF1Q13905 1077 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 SEPT12Q8IYM1 358 aa20.03■□□□□ 0.8
CLSTN1-202ENST00000377298 hCG_1642624A0A1W2PR95 340 aa20.02■□□□□ 0.8
CLSTN1-202ENST00000377298 PAK1Q13153 545 aa20.02■□□□□ 0.8
CLSTN1-202ENST00000377298 MYSM1Q5VVJ2 828 aa20.02■□□□□ 0.8
CLSTN1-202ENST00000377298 HERC4Q5GLZ8 1057 aaPredicted RBP20.02■□□□□ 0.8
CLSTN1-202ENST00000377298 CABP7Q86V35 215 aa20.02■□□□□ 0.8
CLSTN1-202ENST00000377298 NT5C3AQ9H0P0 336 aa20.02■□□□□ 0.8
CLSTN1-202ENST00000377298 CLTCL1P53675 1640 aa20.02■□□□□ 0.8
CLSTN1-202ENST00000377298 EEF2P13639 858 aaKnown RBP20.02■□□□□ 0.8
CLSTN1-202ENST00000377298 HOMER2Q9NSB8 354 aa20.02■□□□□ 0.8
CLSTN1-202ENST00000377298 IKBKGQ9Y6K9 419 aa20.02■□□□□ 0.8
CLSTN1-202ENST00000377298 RRAGDQ9NQL2 400 aaPredicted RBP20.02■□□□□ 0.79
CLSTN1-202ENST00000377298 PALLDQ8WX93 1383 aa20.02■□□□□ 0.79
CLSTN1-202ENST00000377298 TUBB4BP68371 445 aa20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 GALNT17Q6IS24 598 aa20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 MAP4K1Q92918 833 aa20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 BRD1O95696 1058 aa20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 TTC16Q8NEE8 873 aa20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 CCDC17Q96LX7 622 aa20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 KCNG1Q9UIX4 513 aa20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 CLEC4GQ6UXB4 293 aa20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 DPH6Q7L8W6 267 aa20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 BLIDQ8IZY5 108 aa20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 SEC31BQ9NQW1 1179 aa20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 SYNRGQ9UMZ2 1314 aa20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 RNF17Q9BXT8 1623 aaKnown RBP20.01■□□□□ 0.79
CLSTN1-202ENST00000377298 TCP10L2B9ZVM9 353 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 ICA1Q05084 483 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 KIFAP3Q92845 792 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 GUCA1BQ9UMX6 200 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 CPSF1Q10570 1443 aaKnown RBP20■□□□□ 0.79
CLSTN1-202ENST00000377298 KLRF2D3W0D1 207 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 BMS1Q14692 1282 aaKnown RBP20■□□□□ 0.79
CLSTN1-202ENST00000377298 POSTNQ15063 836 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 EAPPQ56P03 285 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms