RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 EAF2Q96CJ1 260 aaPredicted RBP22.54■■□□□ 1.2
HDAC6-202ENST00000376610 TLR7Q9NYK1 1049 aaKnown RBP22.54■■□□□ 1.2
HDAC6-202ENST00000376610 SAP30BPQ9UHR5 308 aaKnown RBP22.54■■□□□ 1.2
HDAC6-202ENST00000376610 TFRCP02786 760 aaKnown RBP22.53■■□□□ 1.2
HDAC6-202ENST00000376610 USP5P45974 858 aa22.53■■□□□ 1.2
HDAC6-202ENST00000376610 MAP3K12Q12852 859 aa22.53■■□□□ 1.2
HDAC6-202ENST00000376610 CEP85Q6P2H3 762 aa22.53■■□□□ 1.2
HDAC6-202ENST00000376610 TMED8Q6PL24 325 aaPredicted RBP22.53■■□□□ 1.2
HDAC6-202ENST00000376610 METTL16Q86W50 562 aaKnown RBP22.53■■□□□ 1.2
HDAC6-202ENST00000376610 NR2E3Q9Y5X4 410 aa22.53■■□□□ 1.2
HDAC6-202ENST00000376610 USP17L10C9JJH3 530 aa22.52■■□□□ 1.2
HDAC6-202ENST00000376610 GDF11O95390 407 aa22.52■■□□□ 1.2
HDAC6-202ENST00000376610 MS4A1P11836 297 aa22.52■■□□□ 1.2
HDAC6-202ENST00000376610 DYNLL1P63167 89 aaKnown RBP22.52■■□□□ 1.2
HDAC6-202ENST00000376610 HSP90AB4PQ58FF6 505 aa22.52■■□□□ 1.2
HDAC6-202ENST00000376610 MAGEB6Q8N7X4 407 aa22.52■■□□□ 1.2
HDAC6-202ENST00000376610 DEFB118Q96PH6 123 aa22.52■■□□□ 1.2
HDAC6-202ENST00000376610 DNAJC18Q9H819 358 aa22.52■■□□□ 1.2
HDAC6-202ENST00000376610 ZBTB21Q9ULJ3 1066 aa22.52■■□□□ 1.2
HDAC6-202ENST00000376610 MYH1P12882 1939 aa22.52■■□□□ 1.2
HDAC6-202ENST00000376610 DIEXFQ68CQ4 756 aaKnown RBP22.51■■□□□ 1.19
HDAC6-202ENST00000376610 UBE2Q1Q7Z7E8 422 aa22.51■■□□□ 1.19
HDAC6-202ENST00000376610 AACSQ86V21 672 aa22.51■■□□□ 1.19
HDAC6-202ENST00000376610 MIGA1Q8NAN2 632 aa22.51■■□□□ 1.19
HDAC6-202ENST00000376610 EXOC6BQ9Y2D4 811 aa22.51■■□□□ 1.19
HDAC6-202ENST00000376610 ZBED9Q6R2W3 1325 aa22.51■■□□□ 1.19
HDAC6-202ENST00000376610 HMGCRP04035 888 aa22.5■■□□□ 1.19
HDAC6-202ENST00000376610 HOXA7P31268 230 aaPredicted RBP22.5■■□□□ 1.19
HDAC6-202ENST00000376610 MORF4L1Q9UBU8 362 aa22.5■■□□□ 1.19
HDAC6-202ENST00000376610 FXR1P51114 621 aaKnown RBP eCLIP22.49■■□□□ 1.19
HDAC6-202ENST00000376610 CHRDL2Q6WN34 429 aa22.49■■□□□ 1.19
HDAC6-202ENST00000376610 CCAR1Q8IX12 1150 aaKnown RBP22.49■■□□□ 1.19
HDAC6-202ENST00000376610 PANK1Q8TE04 598 aa22.49■■□□□ 1.19
HDAC6-202ENST00000376610 GTF3C2Q8WUA4 911 aaPredicted RBP22.49■■□□□ 1.19
HDAC6-202ENST00000376610 PAK6Q9NQU5 681 aaPredicted RBP22.49■■□□□ 1.19
HDAC6-202ENST00000376610 HERVK_113P62684 666 aa22.48■■□□□ 1.19
HDAC6-202ENST00000376610 TTC6Q86TZ1 520 aa22.48■■□□□ 1.19
HDAC6-202ENST00000376610 GPRC5AQ8NFJ5 357 aa22.48■■□□□ 1.19
HDAC6-202ENST00000376610 P2RX7Q99572 595 aaKnown RBP22.48■■□□□ 1.19
HDAC6-202ENST00000376610 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.48■■□□□ 1.19
HDAC6-202ENST00000376610 JAG1P78504 1218 aa22.47■■□□□ 1.19
HDAC6-202ENST00000376610 PDE3AQ14432 1141 aa22.47■■□□□ 1.19
HDAC6-202ENST00000376610 TTF1Q15361 905 aaPredicted RBP22.47■■□□□ 1.19
HDAC6-202ENST00000376610 USP17L2Q6R6M4 530 aa22.47■■□□□ 1.19
HDAC6-202ENST00000376610 FEZ1Q99689 392 aa22.47■■□□□ 1.19
HDAC6-202ENST00000376610 SERPINB13Q9UIV8 391 aa22.47■■□□□ 1.19
HDAC6-202ENST00000376610 NDUFB9Q9Y6M9 179 aa22.47■■□□□ 1.19
HDAC6-202ENST00000376610 EVI5O60447 810 aa22.46■■□□□ 1.19
HDAC6-202ENST00000376610 GH2P01242 217 aa22.46■■□□□ 1.19
HDAC6-202ENST00000376610 SOCS4Q8WXH5 440 aa22.46■■□□□ 1.19
HDAC6-202ENST00000376610 EHD4Q9H223 541 aa22.46■■□□□ 1.19
HDAC6-202ENST00000376610 ANTXR1Q9H6X2 564 aa22.46■■□□□ 1.19
HDAC6-202ENST00000376610 CWC22Q9HCG8 908 aaKnown RBP22.46■■□□□ 1.19
HDAC6-202ENST00000376610 HMX1Q9NP08 348 aaPredicted RBP22.46■■□□□ 1.19
HDAC6-202ENST00000376610 GJD2Q9UKL4 321 aa22.46■■□□□ 1.19
HDAC6-202ENST00000376610 HMMRO75330 724 aa22.45■■□□□ 1.18
HDAC6-202ENST00000376610 MAPK4P31152 587 aa22.45■■□□□ 1.18
HDAC6-202ENST00000376610 SHROOM1Q2M3G4 852 aaPredicted RBP22.45■■□□□ 1.18
HDAC6-202ENST00000376610 CLASRPQ8N2M8 674 aaKnown RBP22.45■■□□□ 1.18
HDAC6-202ENST00000376610 RHPN1Q8TCX5 695 aa22.45■■□□□ 1.18
HDAC6-202ENST00000376610 NUDT12Q9BQG2 462 aa22.45■■□□□ 1.18
HDAC6-202ENST00000376610 IL1RAPL2Q9NP60 686 aa22.45■■□□□ 1.18
HDAC6-202ENST00000376610 CABP5Q9NP86 173 aa22.45■■□□□ 1.18
HDAC6-202ENST00000376610 RPTORQ8N122 1335 aa22.45■■□□□ 1.18
HDAC6-202ENST00000376610 USP14P54578 494 aa22.44■■□□□ 1.18
HDAC6-202ENST00000376610 RAB3GAP1Q15042 981 aa22.44■■□□□ 1.18
HDAC6-202ENST00000376610 CERKLQ49MI3 558 aaPredicted RBP22.44■■□□□ 1.18
HDAC6-202ENST00000376610 TATDN1Q6P1N9 297 aa22.44■■□□□ 1.18
HDAC6-202ENST00000376610 NECAB2Q7Z6G3 386 aa22.44■■□□□ 1.18
HDAC6-202ENST00000376610 PAGR1Q9BTK6 254 aa22.44■■□□□ 1.18
HDAC6-202ENST00000376610 CRISPLD2Q9H0B8 497 aa22.44■■□□□ 1.18
HDAC6-202ENST00000376610 MAGEB6P1A0A0J9YX57 407 aa22.43■■□□□ 1.18
HDAC6-202ENST00000376610 IFIT2P09913 472 aaKnown RBP22.43■■□□□ 1.18
HDAC6-202ENST00000376610 CYP2B6P20813 491 aa22.43■■□□□ 1.18
HDAC6-202ENST00000376610 ERVK-9P63128 1117 aa22.43■■□□□ 1.18
HDAC6-202ENST00000376610 ERVK-24P63145 666 aa22.43■■□□□ 1.18
HDAC6-202ENST00000376610 RPAP2Q8IXW5 612 aaPredicted RBP22.43■■□□□ 1.18
HDAC6-202ENST00000376610 TRMT44Q8IYL2 757 aaKnown RBP22.43■■□□□ 1.18
HDAC6-202ENST00000376610 ANKLE1Q8NAG6 615 aa22.43■■□□□ 1.18
HDAC6-202ENST00000376610 KIF1BPQ96EK5 621 aa22.43■■□□□ 1.18
HDAC6-202ENST00000376610 CRNKL1Q9BZJ0 848 aaKnown RBP22.43■■□□□ 1.18
HDAC6-202ENST00000376610 EMILIN3Q9NT22 766 aa22.43■■□□□ 1.18
HDAC6-202ENST00000376610 APBB1O00213 710 aa22.42■■□□□ 1.18
HDAC6-202ENST00000376610 POLR3DP05423 398 aaPredicted RBP22.42■■□□□ 1.18
HDAC6-202ENST00000376610 ZYXQ15942 572 aaKnown RBP22.42■■□□□ 1.18
HDAC6-202ENST00000376610 ABCB5Q2M3G0 1257 aa22.42■■□□□ 1.18
HDAC6-202ENST00000376610 PAWRQ96IZ0 340 aaKnown RBP22.42■■□□□ 1.18
HDAC6-202ENST00000376610 CHMP4BQ9H444 224 aaKnown RBP22.42■■□□□ 1.18
HDAC6-202ENST00000376610 TXNRD2Q9NNW7 524 aa22.42■■□□□ 1.18
HDAC6-202ENST00000376610 RBPJLQ9UBG7 517 aa22.42■■□□□ 1.18
HDAC6-202ENST00000376610 DDX19BQ9UMR2 479 aa22.42■■□□□ 1.18
HDAC6-202ENST00000376610 USP17L15C9J2P7 530 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 USP17L13C9JLJ4 530 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 USP17L11C9JVI0 530 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 USP17L18D6R9N7 530 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 USP17L22D6RA61 530 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 USP17L17D6RBQ6 530 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 USP17L19D6RCP7 530 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 USP17L20D6RJB6 530 aa22.41■■□□□ 1.18
HDAC6-202ENST00000376610 XRCC5P13010 732 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms