RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 ISY1Q9ULR0 285 aaKnown RBP20.58■□□□□ 0.88
CTTN-203ENST00000376561 ZNF445P59923 1031 aa20.57■□□□□ 0.88
CTTN-203ENST00000376561 TROAPQ12815 778 aa20.57■□□□□ 0.88
CTTN-203ENST00000376561 ILDR1Q86SU0 546 aaPredicted RBP20.57■□□□□ 0.88
CTTN-203ENST00000376561 SLC44A5Q8NCS7 719 aa20.57■□□□□ 0.88
CTTN-203ENST00000376561 USP17L3A6NCW0 530 aa20.57■□□□□ 0.88
CTTN-203ENST00000376561 USP17L4A6NCW7 530 aa20.57■□□□□ 0.88
CTTN-203ENST00000376561 CALM1P0DP23 149 aa20.57■□□□□ 0.88
CTTN-203ENST00000376561 CALM2P0DP24 149 aa20.57■□□□□ 0.88
CTTN-203ENST00000376561 CALM3P0DP25 149 aa20.57■□□□□ 0.88
CTTN-203ENST00000376561 USP17L1Q7RTZ2 530 aa20.57■□□□□ 0.88
CTTN-203ENST00000376561 NBPF11Q86T75 865 aa20.57■□□□□ 0.88
CTTN-203ENST00000376561 GAS2L3Q86XJ1 694 aa20.57■□□□□ 0.88
CTTN-203ENST00000376561 ZNF287Q9HBT7 754 aa20.57■□□□□ 0.88
CTTN-203ENST00000376561 GOLGB1Q14789 3259 aaKnown RBP20.56■□□□□ 0.88
CTTN-203ENST00000376561 DDAH1O94760 285 aa20.56■□□□□ 0.88
CTTN-203ENST00000376561 ZBTB7AO95365 584 aa20.56■□□□□ 0.88
CTTN-203ENST00000376561 TPRNQ4KMQ1 711 aa20.56■□□□□ 0.88
CTTN-203ENST00000376561 CCDC93Q567U6 631 aa20.56■□□□□ 0.88
CTTN-203ENST00000376561 C16orf86Q6ZW13 317 aa20.56■□□□□ 0.88
CTTN-203ENST00000376561 TRIM22Q8IYM9 498 aa20.56■□□□□ 0.88
CTTN-203ENST00000376561 CRACR2BQ8N4Y2 399 aaPredicted RBP20.56■□□□□ 0.88
CTTN-203ENST00000376561 SYAP1Q96A49 352 aaPredicted RBP20.56■□□□□ 0.88
CTTN-203ENST00000376561 PPIP5K2O43314 1243 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 ATL3Q6DD88 541 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 RCSD1Q6JBY9 416 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 APOBEC3HQ6NTF7 200 aaKnown RBP20.55■□□□□ 0.88
CTTN-203ENST00000376561 KIAA0825Q8IV33 1275 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 ZNF444Q8N0Y2 327 aaPredicted RBP20.55■□□□□ 0.88
CTTN-203ENST00000376561 CMTR1Q8N1G2 835 aaKnown RBP20.55■□□□□ 0.88
CTTN-203ENST00000376561 IL17RBQ9NRM6 502 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 UBE2Q2LH0YL09 131 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 WDHD1O75717 1129 aaPredicted RBP20.55■□□□□ 0.88
CTTN-203ENST00000376561 RASA1P20936 1047 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 CRKP46108 304 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 CDK8P49336 464 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 PICALMQ13492 652 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 L1TD1Q5T7N2 865 aaKnown RBP20.55■□□□□ 0.88
CTTN-203ENST00000376561 KRT40Q6A162 431 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 RTKN2Q8IZC4 609 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 CCDC82Q8N4S0 544 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 WASF1Q92558 559 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 MRIQ9BWK5 157 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 USP40Q9NVE5 1235 aa20.55■□□□□ 0.88
CTTN-203ENST00000376561 TSPY3P0CV98 308 aa20.54■□□□□ 0.88
CTTN-203ENST00000376561 TSPY8P0CW00 308 aa20.54■□□□□ 0.88
CTTN-203ENST00000376561 KIF23Q02241 960 aaPredicted RBP20.54■□□□□ 0.88
CTTN-203ENST00000376561 DGKHQ86XP1 1220 aa20.54■□□□□ 0.88
CTTN-203ENST00000376561 ZNF396Q96N95 335 aaPredicted RBP20.54■□□□□ 0.88
CTTN-203ENST00000376561 RBM28Q9NW13 759 aaKnown RBP20.54■□□□□ 0.88
CTTN-203ENST00000376561 CDC42EP5Q6NZY7 148 aa20.54■□□□□ 0.88
CTTN-203ENST00000376561 BRAPQ7Z569 592 aa20.54■□□□□ 0.88
CTTN-203ENST00000376561 ZDHHC15Q96MV8 337 aa20.54■□□□□ 0.88
CTTN-203ENST00000376561 DDX4Q9NQI0 724 aaKnown RBP20.54■□□□□ 0.88
CTTN-203ENST00000376561 TCP11L1Q9NUJ3 509 aa20.54■□□□□ 0.88
CTTN-203ENST00000376561 GUCY1A2P33402 732 aa20.53■□□□□ 0.88
CTTN-203ENST00000376561 ANKS1AQ92625 1134 aa20.53■□□□□ 0.88
CTTN-203ENST00000376561 USP28Q96RU2 1077 aa20.53■□□□□ 0.88
CTTN-203ENST00000376561 PSMD1Q99460 953 aa20.53■□□□□ 0.88
CTTN-203ENST00000376561 KIF28PB7ZC32 967 aa20.53■□□□□ 0.88
CTTN-203ENST00000376561 DEXIO95424 95 aa20.53■□□□□ 0.88
CTTN-203ENST00000376561 HDLBPQ00341 1268 aaKnown RBP20.53■□□□□ 0.88
CTTN-203ENST00000376561 CEBPZQ03701 1054 aaKnown RBP20.53■□□□□ 0.88
CTTN-203ENST00000376561 TRIM29Q14134 588 aa20.53■□□□□ 0.88
CTTN-203ENST00000376561 CCDC178Q5BJE1 867 aa20.53■□□□□ 0.88
CTTN-203ENST00000376561 RNF26Q9BY78 433 aaPredicted RBP20.53■□□□□ 0.88
CTTN-203ENST00000376561 FTOQ9C0B1 505 aaKnown RBP eCLIP20.53■□□□□ 0.88
CTTN-203ENST00000376561 MYH6P13533 1939 aa20.53■□□□□ 0.88
CTTN-203ENST00000376561 YDJCA8MPS7 323 aa20.52■□□□□ 0.88
CTTN-203ENST00000376561 ATF5Q9Y2D1 282 aaPredicted RBP20.52■□□□□ 0.88
CTTN-203ENST00000376561 SYCE3A1L190 88 aa20.51■□□□□ 0.87
CTTN-203ENST00000376561 FUT2Q10981 343 aa20.51■□□□□ 0.87
CTTN-203ENST00000376561 CTCFLQ8NI51 663 aaPredicted RBP20.51■□□□□ 0.87
CTTN-203ENST00000376561 MTFR1LQ9H019 292 aa20.51■□□□□ 0.87
CTTN-203ENST00000376561 KAT14Q9H8E8 782 aa20.51■□□□□ 0.87
CTTN-203ENST00000376561 RCOR1Q9UKL0 485 aa20.51■□□□□ 0.87
CTTN-203ENST00000376561 TAOK2Q9UL54 1235 aa20.51■□□□□ 0.87
CTTN-203ENST00000376561 PLEKHA8P1O95397 391 aa20.51■□□□□ 0.87
CTTN-203ENST00000376561 TGFB2P61812 414 aa20.51■□□□□ 0.87
CTTN-203ENST00000376561 PSME4Q14997 1843 aa20.51■□□□□ 0.87
CTTN-203ENST00000376561 GOLGA6L4A6NEF3 574 aa20.5■□□□□ 0.87
CTTN-203ENST00000376561 POLD1P28340 1107 aa20.5■□□□□ 0.87
CTTN-203ENST00000376561 MRE11P49959 708 aa20.5■□□□□ 0.87
CTTN-203ENST00000376561 MYSM1Q5VVJ2 828 aa20.5■□□□□ 0.87
CTTN-203ENST00000376561 TMTC3Q6ZXV5 915 aa20.5■□□□□ 0.87
CTTN-203ENST00000376561 PGBD1Q96JS3 809 aa20.5■□□□□ 0.87
CTTN-203ENST00000376561 GRPEL1Q9HAV7 217 aa20.5■□□□□ 0.87
CTTN-203ENST00000376561 GABPAQ06546 454 aa20.5■□□□□ 0.87
CTTN-203ENST00000376561 CCDC183Q5T5S1 534 aa20.5■□□□□ 0.87
CTTN-203ENST00000376561 OSBPL5Q9H0X9 879 aaPredicted RBP20.5■□□□□ 0.87
CTTN-203ENST00000376561 SERPINA10Q9UK55 444 aa20.5■□□□□ 0.87
CTTN-203ENST00000376561 PCDHAC2Q9Y5I4 1007 aa20.5■□□□□ 0.87
CTTN-203ENST00000376561 AKAP17AQ02040 695 aaKnown RBP20.49■□□□□ 0.87
CTTN-203ENST00000376561 PNMA1Q8ND90 353 aa20.49■□□□□ 0.87
CTTN-203ENST00000376561 NEDD1Q8NHV4 660 aa20.49■□□□□ 0.87
CTTN-203ENST00000376561 PIM2Q9P1W9 311 aa20.49■□□□□ 0.87
CTTN-203ENST00000376561 PRPF3O43395 683 aaKnown RBP20.49■□□□□ 0.87
CTTN-203ENST00000376561 RBM5P52756 815 aaKnown RBP eCLIP20.49■□□□□ 0.87
CTTN-203ENST00000376561 NFIAQ12857 509 aa20.49■□□□□ 0.87
CTTN-203ENST00000376561 LRSAM1Q6UWE0 723 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms