RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CDC42EP5Q6NZY7 148 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 ZFPM1Q8IX07 1006 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 SLF2Q8IX21 1173 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 PANK2Q9BZ23 570 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 KCNJ14Q9UNX9 436 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 SNED1Q8TER0 1413 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 FSD2A1L4K1 749 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 RASA1P20936 1047 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 CRKP46108 304 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 CDK8P49336 464 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 UBE2HP62256 183 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 APOBEC3HQ6NTF7 200 aaKnown RBP14.66□□□□□ -0.06
CLCN6-206ENST00000376496 AMOTL1Q8IY63 956 aa14.66□□□□□ -0.06
CLCN6-206ENST00000376496 CDKL5O76039 1030 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 KIAA2012Q0VF49 1180 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 TCP10Q12799 353 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 TROAPQ12815 778 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 TMED8Q6PL24 325 aaPredicted RBP14.65□□□□□ -0.06
CLCN6-206ENST00000376496 CATIPQ7Z7H3 387 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 NBPF11Q86T75 865 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 TMTC2Q8N394 836 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 TEKT1Q969V4 418 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 ZSCAN16Q9H4T2 348 aaPredicted RBP14.65□□□□□ -0.06
CLCN6-206ENST00000376496 MYH1P12882 1939 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 RAD17O75943 681 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 TSPY3P0CV98 308 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 TSPY8P0CW00 308 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 IFNAR1P17181 557 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 ZNF444Q8N0Y2 327 aaPredicted RBP14.65□□□□□ -0.06
CLCN6-206ENST00000376496 CRACR2BQ8N4Y2 399 aaPredicted RBP14.65□□□□□ -0.06
CLCN6-206ENST00000376496 PGBD1Q96JS3 809 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 FMNL1O95466 1100 aaPredicted RBP14.65□□□□□ -0.06
CLCN6-206ENST00000376496 PLCG2P16885 1265 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 LIG1P18858 919 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 CLEC10AQ8IUN9 316 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 STX8Q9UNK0 236 aa14.65□□□□□ -0.06
CLCN6-206ENST00000376496 FAM196BA6NMK8 535 aa14.64□□□□□ -0.07
CLCN6-206ENST00000376496 PCP11498 1178 aaKnown RBP14.64□□□□□ -0.07
CLCN6-206ENST00000376496 XRCC6P12956 609 aaKnown RBP eCLIP14.64□□□□□ -0.07
CLCN6-206ENST00000376496 PDIA4P13667 645 aaKnown RBP14.64□□□□□ -0.07
CLCN6-206ENST00000376496 KIF23Q02241 960 aaPredicted RBP14.64□□□□□ -0.07
CLCN6-206ENST00000376496 STRIP1Q5VSL9 837 aa14.64□□□□□ -0.07
CLCN6-206ENST00000376496 SLC16A10Q8TF71 515 aa14.64□□□□□ -0.07
CLCN6-206ENST00000376496 SHISA4Q96DD7 197 aa14.64□□□□□ -0.07
CLCN6-206ENST00000376496 DDX60LQ5H9U9 1706 aaKnown RBP14.64□□□□□ -0.07
CLCN6-206ENST00000376496 COL4A5P29400 1685 aa14.64□□□□□ -0.07
CLCN6-206ENST00000376496 CLIC4Q9Y696 253 aa14.63□□□□□ -0.07
CLCN6-206ENST00000376496 V9GY48 417 aaPredicted RBP14.63□□□□□ -0.07
CLCN6-206ENST00000376496 VEGFAP15692 232 aaPredicted RBP14.63□□□□□ -0.07
CLCN6-206ENST00000376496 CCDC93Q567U6 631 aa14.63□□□□□ -0.07
CLCN6-206ENST00000376496 MTA3Q9BTC8 594 aa14.63□□□□□ -0.07
CLCN6-206ENST00000376496 SCAND2PQ9GZW5 306 aaPredicted RBP14.63□□□□□ -0.07
CLCN6-206ENST00000376496 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
CLCN6-206ENST00000376496 ROBO3Q96MS0 1386 aa14.63□□□□□ -0.07
CLCN6-206ENST00000376496 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.62□□□□□ -0.07
CLCN6-206ENST00000376496 EIF6P56537 245 aaKnown RBP14.62□□□□□ -0.07
CLCN6-206ENST00000376496 C16orf86Q6ZW13 317 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 STAG2Q8N3U4 1231 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 LARGE2Q8N3Y3 721 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 CPVLQ9H3G5 476 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 SUGT1Q9Y2Z0 365 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 TRIM22Q8IYM9 498 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 SRBD1Q8N5C6 995 aaKnown RBP14.62□□□□□ -0.07
CLCN6-206ENST00000376496 KAT14Q9H8E8 782 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 GRPEL1Q9HAV7 217 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 VPS54Q9P1Q0 977 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 MYH15Q9Y2K3 1946 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 NID2Q14112 1375 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 GOLGA6L4A6NEF3 574 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 GOLGA8HP0CJ92 632 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 FUT2Q10981 343 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 GNL2Q13823 731 aaKnown RBP14.62□□□□□ -0.07
CLCN6-206ENST00000376496 CAMK4Q16566 473 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 CSPP1Q1MSJ5 1256 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 SHROOM1Q2M3G4 852 aaPredicted RBP14.62□□□□□ -0.07
CLCN6-206ENST00000376496 HHIPL2Q6UWX4 724 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 PNMA1Q8ND90 353 aa14.62□□□□□ -0.07
CLCN6-206ENST00000376496 BTBD18B2RXH4 712 aa14.61□□□□□ -0.07
CLCN6-206ENST00000376496 IGSF3O75054 1194 aa14.61□□□□□ -0.07
CLCN6-206ENST00000376496 TRIM29Q14134 588 aa14.61□□□□□ -0.07
CLCN6-206ENST00000376496 BICD2Q8TD16 824 aa14.61□□□□□ -0.07
CLCN6-206ENST00000376496 OXER1Q8TDS5 423 aa14.61□□□□□ -0.07
CLCN6-206ENST00000376496 TDRD3Q9H7E2 651 aaKnown RBP14.61□□□□□ -0.07
CLCN6-206ENST00000376496 CCDC196A0A1B0GTZ2 297 aa14.61□□□□□ -0.07
CLCN6-206ENST00000376496 ZNF445P59923 1031 aa14.61□□□□□ -0.07
CLCN6-206ENST00000376496 PKN1Q16512 942 aa14.61□□□□□ -0.07
CLCN6-206ENST00000376496 MYSM1Q5VVJ2 828 aa14.61□□□□□ -0.07
CLCN6-206ENST00000376496 TMEM47Q9BQJ4 181 aa14.61□□□□□ -0.07
CLCN6-206ENST00000376496 CFAP45Q9UL16 551 aa14.61□□□□□ -0.07
CLCN6-206ENST00000376496 DLEC1Q9Y238 1755 aa14.61□□□□□ -0.07
CLCN6-206ENST00000376496 NR5A1Q13285 461 aa14.6□□□□□ -0.07
CLCN6-206ENST00000376496 TMTC3Q6ZXV5 915 aa14.6□□□□□ -0.07
CLCN6-206ENST00000376496 CTCFLQ8NI51 663 aaPredicted RBP14.6□□□□□ -0.07
CLCN6-206ENST00000376496 CEP95Q96GE4 821 aa14.6□□□□□ -0.07
CLCN6-206ENST00000376496 OSBPL5Q9H0X9 879 aaPredicted RBP14.6□□□□□ -0.07
CLCN6-206ENST00000376496 RBSNQ9H1K0 784 aa14.6□□□□□ -0.07
CLCN6-206ENST00000376496 ZNF646O15015 1829 aaPredicted RBP14.6□□□□□ -0.07
CLCN6-206ENST00000376496 PSMD14O00487 310 aa14.6□□□□□ -0.07
CLCN6-206ENST00000376496 AKR1B1P15121 316 aa14.6□□□□□ -0.07
CLCN6-206ENST00000376496 CC2D2BQ6DHV5 1058 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms